RNA–Protein interactions for RNA: ENST00000540935.5

DDX11-217, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-217ENST00000540935 POGZQ7Z3K3 1410 aa23.9■■□□□ 1.42
DDX11-217ENST00000540935 ARHGAP5Q13017 1502 aa23.89■■□□□ 1.41
DDX11-217ENST00000540935 ARID4BQ4LE39 1312 aaPredicted RBP23.88■■□□□ 1.41
DDX11-217ENST00000540935 ZFYVE16Q7Z3T8 1539 aa23.88■■□□□ 1.41
DDX11-217ENST00000540935 ADAMTSL3P82987 1691 aa23.87■■□□□ 1.41
DDX11-217ENST00000540935 BCORL1Q5H9F3 1711 aa23.86■■□□□ 1.41
DDX11-217ENST00000540935 ZNF518AQ6AHZ1 1483 aa23.82■■□□□ 1.4
DDX11-217ENST00000540935 PREX2Q70Z35 1606 aa23.82■■□□□ 1.4
DDX11-217ENST00000540935 YEATS2Q9ULM3 1422 aa23.82■■□□□ 1.4
DDX11-217ENST00000540935 CDC42BPBQ9Y5S2 1711 aa23.81■■□□□ 1.4
DDX11-217ENST00000540935 PTPRMP28827 1452 aa23.8■■□□□ 1.4
DDX11-217ENST00000540935 CEP162Q5TB80 1403 aa23.79■■□□□ 1.4
DDX11-217ENST00000540935 HECW2Q9P2P5 1572 aa23.78■■□□□ 1.4
DDX11-217ENST00000540935 KDM5CP41229 1560 aa23.77■■□□□ 1.4
DDX11-217ENST00000540935 ATP10AO60312 1499 aa23.76■■□□□ 1.39
DDX11-217ENST00000540935 MADDQ8WXG6 1647 aa23.76■■□□□ 1.39
DDX11-217ENST00000540935 CDC42BPAQ5VT25 1732 aa23.75■■□□□ 1.39
DDX11-217ENST00000540935 C9orf84Q5VXU9 1444 aa23.74■■□□□ 1.39
DDX11-217ENST00000540935 AFAP1Q8N556 730 aa23.73■■□□□ 1.39
DDX11-217ENST00000540935 ABCC1P33527 1531 aa23.73■■□□□ 1.39
DDX11-217ENST00000540935 MTUS2Q5JR59 1369 aa23.72■■□□□ 1.39
DDX11-217ENST00000540935 SIGLEC1Q9BZZ2 1709 aa23.7■■□□□ 1.38
DDX11-217ENST00000540935 MLH3Q9UHC1 1453 aa23.69■■□□□ 1.38
DDX11-217ENST00000540935 ITSN2Q9NZM3 1697 aa23.69■■□□□ 1.38
DDX11-217ENST00000540935 GPATCH8Q9UKJ3 1502 aaKnown RBP23.69■■□□□ 1.38
DDX11-217ENST00000540935 RIMS1Q86UR5 1692 aaKnown RBP23.68■■□□□ 1.38
DDX11-217ENST00000540935 MYT1LQ9UL68 1186 aa23.68■■□□□ 1.38
DDX11-217ENST00000540935 ARHGEF12Q9NZN5 1544 aa23.67■■□□□ 1.38
DDX11-217ENST00000540935 CCNB3Q8WWL7 1395 aa23.66■■□□□ 1.38
DDX11-217ENST00000540935 TRAPPC8Q9Y2L5 1435 aa23.66■■□□□ 1.38
DDX11-217ENST00000540935 EHBP1L1Q8N3D4 1523 aa23.65■■□□□ 1.38
DDX11-217ENST00000540935 REREQ9P2R6 1566 aa23.64■■□□□ 1.37
DDX11-217ENST00000540935 DIP2CQ9Y2E4 1556 aa23.64■■□□□ 1.37
DDX11-217ENST00000540935 MLECQ14165 292 aa23.63■■□□□ 1.37
DDX11-217ENST00000540935 SAMD9LQ8IVG5 1584 aa23.63■■□□□ 1.37
DDX11-217ENST00000540935 CFDP1Q9UEE9 299 aaPredicted RBP23.63■■□□□ 1.37
DDX11-217ENST00000540935 ZNF777Q9ULD5 760 aaPredicted RBP23.63■■□□□ 1.37
DDX11-217ENST00000540935 PLEKHH2Q8IVE3 1493 aa23.62■■□□□ 1.37
DDX11-217ENST00000540935 FER1L4A9Z1Z3 1794 aa23.62■■□□□ 1.37
DDX11-217ENST00000540935 KIAA1107Q9UPP5 1409 aa23.6■■□□□ 1.37
DDX11-217ENST00000540935 ABCA6Q8N139 1617 aa23.6■■□□□ 1.37
DDX11-217ENST00000540935 LOC105371045A0A1W2PR82 267 aa23.6■■□□□ 1.37
DDX11-217ENST00000540935 SYCP2Q9BX26 1530 aa23.59■■□□□ 1.37
DDX11-217ENST00000540935 KIDINS220Q9ULH0 1771 aa23.57■■□□□ 1.36
DDX11-217ENST00000540935 AGLP35573 1532 aa23.56■■□□□ 1.36
DDX11-217ENST00000540935 VPS8Q8N3P4 1428 aa23.56■■□□□ 1.36
DDX11-217ENST00000540935 TIAM1Q13009 1591 aa23.55■■□□□ 1.36
DDX11-217ENST00000540935 HNRNPMP52272 730 aaKnown RBP eCLIP23.54■■□□□ 1.36
DDX11-217ENST00000540935 SPAG9O60271 1321 aaKnown RBP23.54■■□□□ 1.36
DDX11-217ENST00000540935 LMTK3Q96Q04 1460 aa23.53■■□□□ 1.36
DDX11-217ENST00000540935 SUPT6HQ7KZ85 1726 aaKnown RBP23.51■■□□□ 1.35
DDX11-217ENST00000540935 PLPPR3Q6T4P5 718 aa23.5■■□□□ 1.35
DDX11-217ENST00000540935 ATP7AQ04656 1500 aa23.49■■□□□ 1.35
DDX11-217ENST00000540935 NCOA2Q15596 1464 aa23.48■■□□□ 1.35
DDX11-217ENST00000540935 INO80Q9ULG1 1556 aaPredicted RBP23.47■■□□□ 1.35
DDX11-217ENST00000540935 ESF1Q9H501 851 aaKnown RBP23.46■■□□□ 1.35
DDX11-217ENST00000540935 MAP3K1Q13233 1512 aa23.45■■□□□ 1.34
DDX11-217ENST00000540935 ZNF644Q9H582 1327 aaPredicted RBP23.44■■□□□ 1.34
DDX11-217ENST00000540935 LRRC9Q6ZRR7 1453 aa23.43■■□□□ 1.34
DDX11-217ENST00000540935 MBD5Q9P267 1494 aa23.43■■□□□ 1.34
DDX11-217ENST00000540935 CNTLNQ9NXG0 1405 aa23.42■■□□□ 1.34
DDX11-217ENST00000540935 RSPH4AQ5TD94 716 aa23.41■■□□□ 1.34
DDX11-217ENST00000540935 CEBPAP49715 358 aaPredicted RBP23.4■■□□□ 1.34
DDX11-217ENST00000540935 A2MP01023 1474 aa23.4■■□□□ 1.34
DDX11-217ENST00000540935 PREX1Q8TCU6 1659 aa23.4■■□□□ 1.34
DDX11-217ENST00000540935 RTEL1-TNFRSF6BF6WH68 1400 aa23.4■■□□□ 1.34
DDX11-217ENST00000540935 PLXNC1O60486 1568 aa23.4■■□□□ 1.34
DDX11-217ENST00000540935 ADGBQ8N7X0 1667 aa23.38■■□□□ 1.33
DDX11-217ENST00000540935 SETD1BQ9UPS6 1966 aaKnown RBP23.38■■□□□ 1.33
DDX11-217ENST00000540935 CAMSAP2Q08AD1 1489 aa23.37■■□□□ 1.33
DDX11-217ENST00000540935 C3P01024 1663 aa23.36■■□□□ 1.33
DDX11-217ENST00000540935 HSPA2P54652 639 aa23.36■■□□□ 1.33
DDX11-217ENST00000540935 CCDC141Q6ZP82 1450 aa23.36■■□□□ 1.33
DDX11-217ENST00000540935 UHRF1BP1Q6BDS2 1440 aa23.33■■□□□ 1.33
DDX11-217ENST00000540935 MROH2AA6NES4 1674 aa23.32■■□□□ 1.32
DDX11-217ENST00000540935 APLP2Q06481 763 aa23.31■■□□□ 1.32
DDX11-217ENST00000540935 KANK4Q5T7N3 995 aaPredicted RBP23.31■■□□□ 1.32
DDX11-217ENST00000540935 PPP6R1Q9UPN7 881 aa23.31■■□□□ 1.32
DDX11-217ENST00000540935 ARHGEF5Q12774 1597 aa23.31■■□□□ 1.32
DDX11-217ENST00000540935 ILDR1Q86SU0 546 aaPredicted RBP23.29■■□□□ 1.32
DDX11-217ENST00000540935 DHX29Q7Z478 1369 aaKnown RBP23.28■■□□□ 1.32
DDX11-217ENST00000540935 MIA2Q96PC5 1412 aa23.28■■□□□ 1.32
DDX11-217ENST00000540935 ZMYM3Q14202 1370 aa23.27■■□□□ 1.32
DDX11-217ENST00000540935 NPATQ14207 1427 aa23.27■■□□□ 1.32
DDX11-217ENST00000540935 MYOM3Q5VTT5 1437 aa23.27■■□□□ 1.32
DDX11-217ENST00000540935 TSPY4P0CV99 314 aa23.27■■□□□ 1.32
DDX11-217ENST00000540935 TSPY10P0CW01 314 aa23.27■■□□□ 1.32
DDX11-217ENST00000540935 GGT6Q6P531 493 aa23.27■■□□□ 1.32
DDX11-217ENST00000540935 CLTCQ00610 1675 aaKnown RBP23.24■■□□□ 1.31
DDX11-217ENST00000540935 DMRT2Q9Y5R5 561 aa23.21■■□□□ 1.31
DDX11-217ENST00000540935 MAST1Q9Y2H9 1570 aa23.19■■□□□ 1.3
DDX11-217ENST00000540935 FAM135AQ9P2D6 1515 aa23.19■■□□□ 1.3
DDX11-217ENST00000540935 KIF3BO15066 747 aa23.18■■□□□ 1.3
DDX11-217ENST00000540935 STRCQ7RTU9 1775 aa23.15■■□□□ 1.3
DDX11-217ENST00000540935 PTPRKQ15262 1439 aa23.15■■□□□ 1.3
DDX11-217ENST00000540935 FBXO41Q8TF61 875 aa23.14■■□□□ 1.29
DDX11-217ENST00000540935 KDM5DQ9BY66 1539 aa23.13■■□□□ 1.29
DDX11-217ENST00000540935 PTPN23Q9H3S7 1636 aa23.1■■□□□ 1.29
DDX11-217ENST00000540935 WASHC2CQ9Y4E1 1318 aa23.09■■□□□ 1.29
DDX11-217ENST00000540935 MYO3AQ8NEV4 1616 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms