RNA–Protein interactions for RNA: ENST00000540250.1

LINC00943-206, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 1,190 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-206ENST00000540250 CCDC180Q9P1Z9 1646 aa15.61■□□□□ 0.09
LINC00943-206ENST00000540250 BCL11BQ9C0K0 894 aaPredicted RBP15.58■□□□□ 0.08
LINC00943-206ENST00000540250 VARS2Q5ST30 1063 aaKnown RBP15.55■□□□□ 0.08
LINC00943-206ENST00000540250 NLRP6P59044 892 aa15.54■□□□□ 0.08
LINC00943-206ENST00000540250 FBXO22Q8NEZ5 403 aa15.54■□□□□ 0.08
LINC00943-206ENST00000540250 ZSWIM6Q9HCJ5 1215 aa15.53■□□□□ 0.08
LINC00943-206ENST00000540250 STK24Q9Y6E0 443 aa15.53■□□□□ 0.08
LINC00943-206ENST00000540250 GPR153Q6NV75 609 aa15.51■□□□□ 0.07
LINC00943-206ENST00000540250 TAOK2Q9UL54 1235 aa15.5■□□□□ 0.07
LINC00943-206ENST00000540250 MFRPQ9BY79 579 aa15.47■□□□□ 0.07
LINC00943-206ENST00000540250 STK25O00506 426 aa15.44■□□□□ 0.06
LINC00943-206ENST00000540250 ECM2O94769 699 aaPredicted RBP15.44■□□□□ 0.06
LINC00943-206ENST00000540250 ARSIQ5FYB1 569 aa15.44■□□□□ 0.06
LINC00943-206ENST00000540250 ZNF687Q8N1G0 1237 aa15.42■□□□□ 0.06
LINC00943-206ENST00000540250 KHSRPQ92945 711 aaKnown RBP eCLIP15.4■□□□□ 0.06
LINC00943-206ENST00000540250 RGL2O15211 777 aa15.36■□□□□ 0.05
LINC00943-206ENST00000540250 PKD2Q13563 968 aa15.36■□□□□ 0.05
LINC00943-206ENST00000540250 KIF3CO14782 793 aa15.34■□□□□ 0.05
LINC00943-206ENST00000540250 RNF166Q96A37 237 aaPredicted RBP15.34■□□□□ 0.05
LINC00943-206ENST00000540250 C2orf72A6NCS6 295 aa15.33■□□□□ 0.04
LINC00943-206ENST00000540250 ZNF316A6NFI3 1004 aaPredicted RBP15.32■□□□□ 0.04
LINC00943-206ENST00000540250 MYT1LQ9UL68 1186 aa15.29■□□□□ 0.04
LINC00943-206ENST00000540250 NUDT7P0C024 238 aa15.23■□□□□ 0.03
LINC00943-206ENST00000540250 AMER1Q5JTC6 1135 aaPredicted RBP15.22■□□□□ 0.03
LINC00943-206ENST00000540250 ANKRD13DQ6ZTN6 518 aa15.22■□□□□ 0.03
LINC00943-206ENST00000540250 PPP1R37O75864 691 aa15.21■□□□□ 0.03
LINC00943-206ENST00000540250 TMC2Q8TDI7 906 aa15.19■□□□□ 0.02
LINC00943-206ENST00000540250 PCDHGA4Q9Y5G9 962 aa15.18■□□□□ 0.02
LINC00943-206ENST00000540250 SLC34A2O95436 690 aa15.17■□□□□ 0.02
LINC00943-206ENST00000540250 PTGER2P43116 358 aa15.17■□□□□ 0.02
LINC00943-206ENST00000540250 LSM11P83369 360 aaKnown RBP eCLIP15.17■□□□□ 0.02
LINC00943-206ENST00000540250 LHX6Q9UPM6 363 aa15.16■□□□□ 0.02
LINC00943-206ENST00000540250 RTN4Q9NQC3 1192 aaKnown RBP15.13■□□□□ 0.01
LINC00943-206ENST00000540250 POTEEQ6S8J3 1075 aa15.11■□□□□ 0.01
LINC00943-206ENST00000540250 PBX2P40425 430 aa15.09■□□□□ 0.01
LINC00943-206ENST00000540250 AXIN2Q9Y2T1 843 aa15.09■□□□□ 0.01
LINC00943-206ENST00000540250 HS6ST3Q8IZP7 471 aa15.01□□□□□ -0.01
LINC00943-206ENST00000540250 KDM4FA0A1W2PPD8 638 aa14.99□□□□□ -0.01
LINC00943-206ENST00000540250 PTCD2Q8WV60 388 aaKnown RBP14.98□□□□□ -0.01
LINC00943-206ENST00000540250 FOXK1P85037 733 aa14.97□□□□□ -0.01
LINC00943-206ENST00000540250 PLPP6Q8IY26 295 aa14.97□□□□□ -0.01
LINC00943-206ENST00000540250 ZCCHC6Q5VYS8 1495 aaKnown RBP14.96□□□□□ -0.01
LINC00943-206ENST00000540250 ARHGAP33O14559 1287 aa14.94□□□□□ -0.02
LINC00943-206ENST00000540250 GPHNQ9NQX3 736 aaPredicted RBP14.94□□□□□ -0.02
LINC00943-206ENST00000540250 PSDA5PKW4 1024 aaPredicted RBP14.93□□□□□ -0.02
LINC00943-206ENST00000540250 DSG2Q14126 1118 aa14.92□□□□□ -0.02
LINC00943-206ENST00000540250 ADGRD1Q6QNK2 874 aa14.91□□□□□ -0.02
LINC00943-206ENST00000540250 CHGAP10645 457 aaKnown RBP14.9□□□□□ -0.02
LINC00943-206ENST00000540250 PSEN2P49810 448 aa14.87□□□□□ -0.03
LINC00943-206ENST00000540250 DMRTA1Q5VZB9 504 aa14.87□□□□□ -0.03
LINC00943-206ENST00000540250 NKX1-1Q15270 411 aaPredicted RBP14.85□□□□□ -0.03
LINC00943-206ENST00000540250 PPP4R3BQ5MIZ7 849 aa14.83□□□□□ -0.04
LINC00943-206ENST00000540250 TK2O00142 265 aa14.82□□□□□ -0.04
LINC00943-206ENST00000540250 TBC1D12O60347 775 aa14.82□□□□□ -0.04
LINC00943-206ENST00000540250 SLC24A1O60721 1099 aa14.82□□□□□ -0.04
LINC00943-206ENST00000540250 HCSTQ9UBK5 93 aa14.81□□□□□ -0.04
LINC00943-206ENST00000540250 HRO43593 1189 aa14.8□□□□□ -0.04
LINC00943-206ENST00000540250 DNAJC5Q9H3Z4 198 aa14.79□□□□□ -0.04
LINC00943-206ENST00000540250 PLA2G2EQ9NZK7 142 aa14.77□□□□□ -0.05
LINC00943-206ENST00000540250 OXER1Q8TDS5 423 aa14.76□□□□□ -0.05
LINC00943-206ENST00000540250 UPF1Q92900 1129 aaKnown RBP eCLIP14.76□□□□□ -0.05
LINC00943-206ENST00000540250 DCAF1Q9Y4B6 1507 aa14.75□□□□□ -0.05
LINC00943-206ENST00000540250 KCNK17Q96T54 332 aa14.74□□□□□ -0.05
LINC00943-206ENST00000540250 CRISPLD2Q9H0B8 497 aa14.74□□□□□ -0.05
LINC00943-206ENST00000540250 PPP1R15BQ5SWA1 713 aa14.7□□□□□ -0.06
LINC00943-206ENST00000540250 RYDENQ9NUL5 291 aaKnown RBP14.7□□□□□ -0.06
LINC00943-206ENST00000540250 KCTD12Q96CX2 325 aaKnown RBP14.69□□□□□ -0.06
LINC00943-206ENST00000540250 ZNF454Q8N9F8 522 aa14.68□□□□□ -0.06
LINC00943-206ENST00000540250 ABCC9O60706 1549 aa14.67□□□□□ -0.06
LINC00943-206ENST00000540250 KCNH8Q96L42 1107 aa14.67□□□□□ -0.06
LINC00943-206ENST00000540250 NCKAP5LQ9HCH0 1330 aa14.66□□□□□ -0.06
LINC00943-206ENST00000540250 STAC3Q96MF2 364 aa14.65□□□□□ -0.06
LINC00943-206ENST00000540250 VPS9D1Q9Y2B5 631 aa14.65□□□□□ -0.06
LINC00943-206ENST00000540250 BCL2L12Q9HB09 334 aa14.62□□□□□ -0.07
LINC00943-206ENST00000540250 PDE4AP27815 886 aa14.61□□□□□ -0.07
LINC00943-206ENST00000540250 FOSBP53539 338 aa14.6□□□□□ -0.07
LINC00943-206ENST00000540250 MYO15BQ96JP2 1530 aa14.58□□□□□ -0.08
LINC00943-206ENST00000540250 GTPBP6O43824 516 aaPredicted RBP14.58□□□□□ -0.08
LINC00943-206ENST00000540250 DCAF8L2P0C7V8 631 aa14.57□□□□□ -0.08
LINC00943-206ENST00000540250 SLC4A5Q9BY07 1137 aa14.56□□□□□ -0.08
LINC00943-206ENST00000540250 ANO8Q9HCE9 1232 aaPredicted RBP14.56□□□□□ -0.08
LINC00943-206ENST00000540250 EVI5O60447 810 aa14.54□□□□□ -0.08
LINC00943-206ENST00000540250 LARP6Q9BRS8 491 aaKnown RBP14.54□□□□□ -0.08
LINC00943-206ENST00000540250 PTPREP23469 700 aa14.53□□□□□ -0.08
LINC00943-206ENST00000540250 PTPN5P54829 565 aa14.53□□□□□ -0.08
LINC00943-206ENST00000540250 JPH4Q96JJ6 628 aa14.53□□□□□ -0.08
LINC00943-206ENST00000540250 ZBED2Q9BTP6 218 aa14.52□□□□□ -0.09
LINC00943-206ENST00000540250 BHMG1C9JSJ3 638 aaPredicted RBP14.51□□□□□ -0.09
LINC00943-206ENST00000540250 DDX27Q96GQ7 796 aaKnown RBP14.51□□□□□ -0.09
LINC00943-206ENST00000540250 ADAM33Q9BZ11 813 aa14.5□□□□□ -0.09
LINC00943-206ENST00000540250 NACADO15069 1562 aa14.5□□□□□ -0.09
LINC00943-206ENST00000540250 ZDHHC16Q969W1 377 aa14.49□□□□□ -0.09
LINC00943-206ENST00000540250 MFSD10Q14728 455 aa14.47□□□□□ -0.09
LINC00943-206ENST00000540250 THSD4Q6ZMP0 1018 aa14.46□□□□□ -0.09
LINC00943-206ENST00000540250 MAP3K9P80192 1104 aa14.45□□□□□ -0.1
LINC00943-206ENST00000540250 EMILIN3Q9NT22 766 aa14.45□□□□□ -0.1
LINC00943-206ENST00000540250 GOLGA8CPA6NN73 597 aa14.42□□□□□ -0.1
LINC00943-206ENST00000540250 MRPL50Q8N5N7 158 aaKnown RBP14.42□□□□□ -0.1
LINC00943-206ENST00000540250 WNT2BQ93097 391 aa14.41□□□□□ -0.1
LINC00943-206ENST00000540250 SHROOM4Q9ULL8 1493 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms