RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 AEBP1Q8IUX7 1158 aa14.23□□□□□ -0.13
PBX1-212ENST00000540236 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.23□□□□□ -0.13
PBX1-212ENST00000540236 PDIA4P13667 645 aaKnown RBP14.23□□□□□ -0.13
PBX1-212ENST00000540236 KIAA1211Q6ZU35 1233 aa14.23□□□□□ -0.13
PBX1-212ENST00000540236 GOLGA3Q08378 1498 aa14.23□□□□□ -0.13
PBX1-212ENST00000540236 FOXD1Q16676 465 aa14.23□□□□□ -0.13
PBX1-212ENST00000540236 CC2D1BQ5T0F9 858 aaKnown RBP14.22□□□□□ -0.13
PBX1-212ENST00000540236 WASHC2AQ641Q2 1341 aa14.22□□□□□ -0.13
PBX1-212ENST00000540236 RRP1P56182 461 aaKnown RBP14.21□□□□□ -0.13
PBX1-212ENST00000540236 MFAP1P55081 439 aaKnown RBP14.2□□□□□ -0.14
PBX1-212ENST00000540236 PANK2Q9BZ23 570 aa14.19□□□□□ -0.14
PBX1-212ENST00000540236 BACH2Q9BYV9 841 aa14.19□□□□□ -0.14
PBX1-212ENST00000540236 TNNT3P45378 269 aaPredicted RBP14.18□□□□□ -0.14
PBX1-212ENST00000540236 MPNDQ8N594 471 aa14.18□□□□□ -0.14
PBX1-212ENST00000540236 FOXD4L5Q5VV16 416 aaPredicted RBP14.18□□□□□ -0.14
PBX1-212ENST00000540236 FOXD4L4Q8WXT5 416 aaPredicted RBP14.18□□□□□ -0.14
PBX1-212ENST00000540236 ZBED9Q6R2W3 1325 aa14.18□□□□□ -0.14
PBX1-212ENST00000540236 CBX1P83916 185 aa14.17□□□□□ -0.14
PBX1-212ENST00000540236 FGD1P98174 961 aa14.17□□□□□ -0.14
PBX1-212ENST00000540236 GOLGA6L22H0YM25 854 aa14.17□□□□□ -0.14
PBX1-212ENST00000540236 WDR43Q15061 677 aaKnown RBP eCLIP14.17□□□□□ -0.14
PBX1-212ENST00000540236 HSCBQ8IWL3 235 aa14.17□□□□□ -0.14
PBX1-212ENST00000540236 FAM161AQ3B820 660 aa14.16□□□□□ -0.14
PBX1-212ENST00000540236 TPM2P07951 284 aa14.15□□□□□ -0.14
PBX1-212ENST00000540236 CCDC88BA6NC98 1476 aa14.15□□□□□ -0.14
PBX1-212ENST00000540236 UQCRHLA0A096LP55 91 aa14.15□□□□□ -0.14
PBX1-212ENST00000540236 UQCRHP07919 91 aa14.15□□□□□ -0.14
PBX1-212ENST00000540236 NAP1L2Q9ULW6 460 aaPredicted RBP14.14□□□□□ -0.15
PBX1-212ENST00000540236 NEUROD2Q15784 382 aa14.13□□□□□ -0.15
PBX1-212ENST00000540236 CCNB3Q8WWL7 1395 aa14.13□□□□□ -0.15
PBX1-212ENST00000540236 WASHC2CQ9Y4E1 1318 aa14.13□□□□□ -0.15
PBX1-212ENST00000540236 WDR97A6NE52 1622 aa14.12□□□□□ -0.15
PBX1-212ENST00000540236 AAMPQ13685 434 aa14.12□□□□□ -0.15
PBX1-212ENST00000540236 RUSC2Q8N2Y8 1516 aa14.11□□□□□ -0.15
PBX1-212ENST00000540236 IGSF3O75054 1194 aa14.1□□□□□ -0.15
PBX1-212ENST00000540236 PRKRIP1Q9H875 184 aaPredicted RBP14.1□□□□□ -0.15
PBX1-212ENST00000540236 TRERF1Q96PN7 1200 aa14.09□□□□□ -0.15
PBX1-212ENST00000540236 WRNQ14191 1432 aaPredicted RBP eCLIP14.09□□□□□ -0.15
PBX1-212ENST00000540236 SETD5Q9C0A6 1442 aa14.09□□□□□ -0.15
PBX1-212ENST00000540236 TRAK2O60296 914 aa14.08□□□□□ -0.16
PBX1-212ENST00000540236 PDCL3Q9H2J4 239 aa14.08□□□□□ -0.16
PBX1-212ENST00000540236 ESPNB1AK53 854 aa14.08□□□□□ -0.16
PBX1-212ENST00000540236 NACADO15069 1562 aa14.08□□□□□ -0.16
PBX1-212ENST00000540236 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.07□□□□□ -0.16
PBX1-212ENST00000540236 FOXD4L6Q3SYB3 417 aaPredicted RBP14.07□□□□□ -0.16
PBX1-212ENST00000540236 FOXD4L3Q6VB84 417 aaPredicted RBP14.07□□□□□ -0.16
PBX1-212ENST00000540236 CGNQ9P2M7 1197 aaKnown RBP14.07□□□□□ -0.16
PBX1-212ENST00000540236 SPDYE4A6NLX3 237 aa14.06□□□□□ -0.16
PBX1-212ENST00000540236 GRPEL1Q9HAV7 217 aa14.06□□□□□ -0.16
PBX1-212ENST00000540236 APPP05067 770 aa14.06□□□□□ -0.16
PBX1-212ENST00000540236 MS4A1P11836 297 aa14.04□□□□□ -0.16
PBX1-212ENST00000540236 CDCA7LQ96GN5 454 aa14.04□□□□□ -0.16
PBX1-212ENST00000540236 XPCQ01831 940 aaPredicted RBP14.04□□□□□ -0.16
PBX1-212ENST00000540236 MRE11P49959 708 aa14.03□□□□□ -0.16
PBX1-212ENST00000540236 XRCC6P12956 609 aaKnown RBP eCLIP14.03□□□□□ -0.16
PBX1-212ENST00000540236 ERICH4A6NGS2 130 aa14.03□□□□□ -0.16
PBX1-212ENST00000540236 PTMSP20962 102 aa14.02□□□□□ -0.16
PBX1-212ENST00000540236 FAM177BA6PVY3 158 aa14.02□□□□□ -0.17
PBX1-212ENST00000540236 CHAF1AQ13111 956 aaPredicted RBP14.02□□□□□ -0.17
PBX1-212ENST00000540236 VPS8Q8N3P4 1428 aa14.02□□□□□ -0.17
PBX1-212ENST00000540236 GBP4Q96PP9 640 aa14.02□□□□□ -0.17
PBX1-212ENST00000540236 CERS3Q8IU89 383 aa14.01□□□□□ -0.17
PBX1-212ENST00000540236 NASPP49321 788 aaPredicted RBP14□□□□□ -0.17
PBX1-212ENST00000540236 CCDC146Q8IYE0 955 aa14□□□□□ -0.17
PBX1-212ENST00000540236 DDX49Q9Y6V7 483 aaKnown RBP14□□□□□ -0.17
PBX1-212ENST00000540236 ZNF777Q9ULD5 760 aaPredicted RBP13.99□□□□□ -0.17
PBX1-212ENST00000540236 DRC7Q8IY82 874 aa13.98□□□□□ -0.17
PBX1-212ENST00000540236 DDX11L8A8MPP1 907 aa13.98□□□□□ -0.17
PBX1-212ENST00000540236 NOL8Q76FK4 1167 aaKnown RBP13.97□□□□□ -0.17
PBX1-212ENST00000540236 RNF214Q8ND24 703 aa13.97□□□□□ -0.17
PBX1-212ENST00000540236 KIAA2012Q0VF49 1180 aa13.97□□□□□ -0.17
PBX1-212ENST00000540236 CENPQQ7L2Z9 268 aaPredicted RBP13.96□□□□□ -0.17
PBX1-212ENST00000540236 KTN1Q86UP2 1357 aaKnown RBP13.96□□□□□ -0.17
PBX1-212ENST00000540236 CLUAP1Q96AJ1 413 aa13.96□□□□□ -0.18
PBX1-212ENST00000540236 CLCN1P35523 988 aa13.96□□□□□ -0.18
PBX1-212ENST00000540236 HAP1P54257 671 aaPredicted RBP13.96□□□□□ -0.18
PBX1-212ENST00000540236 CALD1Q05682 793 aaKnown RBP13.94□□□□□ -0.18
PBX1-212ENST00000540236 MCTP1Q6DN14 999 aa13.94□□□□□ -0.18
PBX1-212ENST00000540236 ZNF592Q92610 1267 aa13.94□□□□□ -0.18
PBX1-212ENST00000540236 C20orf194Q5TEA3 1177 aa13.93□□□□□ -0.18
PBX1-212ENST00000540236 FTSJ3Q8IY81 847 aaKnown RBP13.93□□□□□ -0.18
PBX1-212ENST00000540236 CARD11Q9BXL7 1154 aa13.93□□□□□ -0.18
PBX1-212ENST00000540236 SENP3Q9H4L4 574 aaPredicted RBP13.92□□□□□ -0.18
PBX1-212ENST00000540236 TAF7LQ5H9L4 462 aa13.92□□□□□ -0.18
PBX1-212ENST00000540236 PPP4R3BQ5MIZ7 849 aa13.91□□□□□ -0.18
PBX1-212ENST00000540236 ZBTB9Q96C00 473 aa13.91□□□□□ -0.18
PBX1-212ENST00000540236 CEP164Q9UPV0 1460 aa13.91□□□□□ -0.18
PBX1-212ENST00000540236 BCL2L13Q9BXK5 485 aa13.9□□□□□ -0.18
PBX1-212ENST00000540236 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.89□□□□□ -0.19
PBX1-212ENST00000540236 CAVIN1Q6NZI2 390 aaKnown RBP13.89□□□□□ -0.19
PBX1-212ENST00000540236 ZFP91Q96JP5 570 aaPredicted RBP13.89□□□□□ -0.19
PBX1-212ENST00000540236 MAP7D2Q96T17 732 aa13.89□□□□□ -0.19
PBX1-212ENST00000540236 RBM25P49756 843 aaKnown RBP13.89□□□□□ -0.19
PBX1-212ENST00000540236 ZNF526Q8TF50 670 aaPredicted RBP13.89□□□□□ -0.19
PBX1-212ENST00000540236 KCNJ4P48050 445 aa13.89□□□□□ -0.19
PBX1-212ENST00000540236 COG6Q9Y2V7 657 aa13.89□□□□□ -0.19
PBX1-212ENST00000540236 CHMP5Q9NZZ3 219 aa13.88□□□□□ -0.19
PBX1-212ENST00000540236 L3MBTL2Q969R5 705 aa13.88□□□□□ -0.19
PBX1-212ENST00000540236 MCM4P33991 863 aa13.88□□□□□ -0.19
PBX1-212ENST00000540236 SMG6Q86US8 1419 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms