RNA–Protein interactions for RNA: ENST00000539972.5

MDM1-209, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-209ENST00000539972 PCDH10Q9P2E7 1040 aa11.37□□□□□ -0.59
MDM1-209ENST00000539972 HOXB3P14651 431 aaPredicted RBP11.35□□□□□ -0.59
MDM1-209ENST00000539972 PAXIP1Q6ZW49 1069 aaPredicted RBP11.34□□□□□ -0.59
MDM1-209ENST00000539972 SPRYD3Q8NCJ5 442 aa11.32□□□□□ -0.6
MDM1-209ENST00000539972 CFAP44Q96MT7 982 aa11.32□□□□□ -0.6
MDM1-209ENST00000539972 NKX1-1Q15270 411 aaPredicted RBP11.29□□□□□ -0.6
MDM1-209ENST00000539972 MARVELD3Q96A59 401 aa11.28□□□□□ -0.6
MDM1-209ENST00000539972 PPP1R37O75864 691 aa11.27□□□□□ -0.61
MDM1-209ENST00000539972 DOK7Q18PE1 504 aa11.27□□□□□ -0.61
MDM1-209ENST00000539972 HAP1P54257 671 aaPredicted RBP11.26□□□□□ -0.61
MDM1-209ENST00000539972 CDAN1Q8IWY9 1227 aa11.26□□□□□ -0.61
MDM1-209ENST00000539972 RYDENQ9NUL5 291 aaKnown RBP11.26□□□□□ -0.61
MDM1-209ENST00000539972 KIF3CO14782 793 aa11.23□□□□□ -0.61
MDM1-209ENST00000539972 EMP3P54852 163 aa11.23□□□□□ -0.61
MDM1-209ENST00000539972 HOXB1P14653 301 aaPredicted RBP11.22□□□□□ -0.61
MDM1-209ENST00000539972 ZNF710Q8N1W2 664 aa11.22□□□□□ -0.61
MDM1-209ENST00000539972 PLSCR2Q9NRY7 297 aa11.22□□□□□ -0.61
MDM1-209ENST00000539972 C2orf72A6NCS6 295 aa11.2□□□□□ -0.62
MDM1-209ENST00000539972 GTPBP6O43824 516 aaPredicted RBP11.2□□□□□ -0.62
MDM1-209ENST00000539972 RIMBP2O15034 1052 aa11.19□□□□□ -0.62
MDM1-209ENST00000539972 ZSWIM6Q9HCJ5 1215 aa11.19□□□□□ -0.62
MDM1-209ENST00000539972 POTEB3A0JP26 581 aa11.17□□□□□ -0.62
MDM1-209ENST00000539972 POTEBQ6S5H4 581 aa11.17□□□□□ -0.62
MDM1-209ENST00000539972 FAM205CA6NFA0 338 aa11.15□□□□□ -0.62
MDM1-209ENST00000539972 GPR153Q6NV75 609 aa11.15□□□□□ -0.62
MDM1-209ENST00000539972 HS3ST6Q96QI5 342 aa11.15□□□□□ -0.62
MDM1-209ENST00000539972 TMC2Q8TDI7 906 aa11.14□□□□□ -0.63
MDM1-209ENST00000539972 TSHZ2Q9NRE2 1034 aa11.09□□□□□ -0.63
MDM1-209ENST00000539972 SLC34A2O95436 690 aa11.08□□□□□ -0.64
MDM1-209ENST00000539972 ARSIQ5FYB1 569 aa11.08□□□□□ -0.64
MDM1-209ENST00000539972 ERBB3P21860 1342 aa11.08□□□□□ -0.64
MDM1-209ENST00000539972 VSIG10Q8N0Z9 540 aa11.07□□□□□ -0.64
MDM1-209ENST00000539972 GPHNQ9NQX3 736 aaPredicted RBP11.06□□□□□ -0.64
MDM1-209ENST00000539972 FOXK1P85037 733 aa11.05□□□□□ -0.64
MDM1-209ENST00000539972 KRTAP3-3Q9BYR6 98 aa11.05□□□□□ -0.64
MDM1-209ENST00000539972 KRTAP3-2Q9BYR7 98 aa11.05□□□□□ -0.64
MDM1-209ENST00000539972 KHSRPQ92945 711 aaKnown RBP eCLIP11.04□□□□□ -0.64
MDM1-209ENST00000539972 VARS2Q5ST30 1063 aaKnown RBP11.03□□□□□ -0.64
MDM1-209ENST00000539972 PCDHGA4Q9Y5G9 962 aa11.01□□□□□ -0.65
MDM1-209ENST00000539972 DSG2Q14126 1118 aa11□□□□□ -0.65
MDM1-209ENST00000539972 PLPP6Q8IY26 295 aa11□□□□□ -0.65
MDM1-209ENST00000539972 CRISPLD2Q9H0B8 497 aa11□□□□□ -0.65
MDM1-209ENST00000539972 SPNS2Q8IVW8 549 aa10.99□□□□□ -0.65
MDM1-209ENST00000539972 ZNF316A6NFI3 1004 aaPredicted RBP10.98□□□□□ -0.65
MDM1-209ENST00000539972 PTCD2Q8WV60 388 aaKnown RBP10.98□□□□□ -0.65
MDM1-209ENST00000539972 NUDT7P0C024 238 aa10.97□□□□□ -0.65
MDM1-209ENST00000539972 ZNF687Q8N1G0 1237 aa10.97□□□□□ -0.65
MDM1-209ENST00000539972 NCKAP5LQ9HCH0 1330 aa10.96□□□□□ -0.65
MDM1-209ENST00000539972 KDM2AQ9Y2K7 1162 aa10.96□□□□□ -0.65
MDM1-209ENST00000539972 KDM4FA0A1W2PPD8 638 aa10.95□□□□□ -0.66
MDM1-209ENST00000539972 MMRN1Q13201 1228 aa10.92□□□□□ -0.66
MDM1-209ENST00000539972 PDE4AP27815 886 aa10.91□□□□□ -0.66
MDM1-209ENST00000539972 LHX6Q9UPM6 363 aa10.91□□□□□ -0.66
MDM1-209ENST00000539972 PPP1R15BQ5SWA1 713 aa10.9□□□□□ -0.66
MDM1-209ENST00000539972 CADPS2Q86UW7 1296 aa10.9□□□□□ -0.66
MDM1-209ENST00000539972 OXER1Q8TDS5 423 aa10.88□□□□□ -0.67
MDM1-209ENST00000539972 TBC1D12O60347 775 aa10.86□□□□□ -0.67
MDM1-209ENST00000539972 MFSD10Q14728 455 aa10.86□□□□□ -0.67
MDM1-209ENST00000539972 LARP6Q9BRS8 491 aaKnown RBP10.85□□□□□ -0.67
MDM1-209ENST00000539972 DDX27Q96GQ7 796 aaKnown RBP10.84□□□□□ -0.67
MDM1-209ENST00000539972 WDR70Q9NW82 654 aa10.84□□□□□ -0.67
MDM1-209ENST00000539972 PSDA5PKW4 1024 aaPredicted RBP10.83□□□□□ -0.68
MDM1-209ENST00000539972 PBX2P40425 430 aa10.82□□□□□ -0.68
MDM1-209ENST00000539972 POTEEQ6S8J3 1075 aa10.82□□□□□ -0.68
MDM1-209ENST00000539972 UPF1Q92900 1129 aaKnown RBP eCLIP10.82□□□□□ -0.68
MDM1-209ENST00000539972 LSM11P83369 360 aaKnown RBP eCLIP10.79□□□□□ -0.68
MDM1-209ENST00000539972 P3H3Q8IVL6 736 aa10.77□□□□□ -0.69
MDM1-209ENST00000539972 AXIN2Q9Y2T1 843 aa10.76□□□□□ -0.69
MDM1-209ENST00000539972 PPP4R3BQ5MIZ7 849 aa10.75□□□□□ -0.69
MDM1-209ENST00000539972 ANKRD13DQ6ZTN6 518 aa10.75□□□□□ -0.69
MDM1-209ENST00000539972 EMILIN3Q9NT22 766 aa10.75□□□□□ -0.69
MDM1-209ENST00000539972 BCANQ96GW7 911 aa10.74□□□□□ -0.69
MDM1-209ENST00000539972 ANO8Q9HCE9 1232 aaPredicted RBP10.74□□□□□ -0.69
MDM1-209ENST00000539972 ARHGAP33O14559 1287 aa10.73□□□□□ -0.69
MDM1-209ENST00000539972 PTGER2P43116 358 aa10.73□□□□□ -0.69
MDM1-209ENST00000539972 EVI5O60447 810 aa10.71□□□□□ -0.69
MDM1-209ENST00000539972 CAMK2BQ13554 666 aa10.71□□□□□ -0.69
MDM1-209ENST00000539972 MYT1LQ9UL68 1186 aa10.71□□□□□ -0.69
MDM1-209ENST00000539972 E2F4Q16254 413 aa10.7□□□□□ -0.7
MDM1-209ENST00000539972 FOSBP53539 338 aa10.69□□□□□ -0.7
MDM1-209ENST00000539972 MAP3K9P80192 1104 aa10.69□□□□□ -0.7
MDM1-209ENST00000539972 KCNV2Q8TDN2 545 aa10.69□□□□□ -0.7
MDM1-209ENST00000539972 RNF166Q96A37 237 aaPredicted RBP10.69□□□□□ -0.7
MDM1-209ENST00000539972 NBR1Q14596 966 aa10.68□□□□□ -0.7
MDM1-209ENST00000539972 ZNF454Q8N9F8 522 aa10.68□□□□□ -0.7
MDM1-209ENST00000539972 PSEN2P49810 448 aa10.67□□□□□ -0.7
MDM1-209ENST00000539972 DMRTA1Q5VZB9 504 aa10.66□□□□□ -0.7
MDM1-209ENST00000539972 JPH4Q96JJ6 628 aa10.66□□□□□ -0.7
MDM1-209ENST00000539972 TK2O00142 265 aa10.65□□□□□ -0.7
MDM1-209ENST00000539972 ADGRD1Q6QNK2 874 aa10.65□□□□□ -0.7
MDM1-209ENST00000539972 BCL2L12Q9HB09 334 aa10.65□□□□□ -0.7
MDM1-209ENST00000539972 KCNK17Q96T54 332 aa10.64□□□□□ -0.71
MDM1-209ENST00000539972 ARHGEF1Q92888 912 aaKnown RBP10.61□□□□□ -0.71
MDM1-209ENST00000539972 ZDHHC16Q969W1 377 aa10.61□□□□□ -0.71
MDM1-209ENST00000539972 KCNH8Q96L42 1107 aa10.61□□□□□ -0.71
MDM1-209ENST00000539972 DPYSL4O14531 572 aa10.6□□□□□ -0.71
MDM1-209ENST00000539972 HRO43593 1189 aa10.6□□□□□ -0.71
MDM1-209ENST00000539972 ADAM33Q9BZ11 813 aa10.59□□□□□ -0.71
MDM1-209ENST00000539972 PCDHGA10Q9Y5H3 936 aa10.58□□□□□ -0.72
MDM1-209ENST00000539972 PTPREP23469 700 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms