RNA–Protein interactions for RNA: ENST00000539953.1

SCNN1A-214, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 2

Gene SCNN1A, Length 401 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-214ENST00000539953 MAGI2Q86UL8 1455 aa20.56■□□□□ 0.88
SCNN1A-214ENST00000539953 POGZQ7Z3K3 1410 aa20.55■□□□□ 0.88
SCNN1A-214ENST00000539953 SCAPERQ9BY12 1400 aa20.54■□□□□ 0.88
SCNN1A-214ENST00000539953 ATP1B4Q9UN42 357 aaPredicted RBP20.53■□□□□ 0.88
SCNN1A-214ENST00000539953 PCF11O94913 1555 aaKnown RBP20.53■□□□□ 0.88
SCNN1A-214ENST00000539953 LMTK3Q96Q04 1460 aa20.52■□□□□ 0.88
SCNN1A-214ENST00000539953 TROQ12816 1431 aaPredicted RBP20.51■□□□□ 0.87
SCNN1A-214ENST00000539953 FER1L4A9Z1Z3 1794 aa20.49■□□□□ 0.87
SCNN1A-214ENST00000539953 CDC42BPBQ9Y5S2 1711 aa20.49■□□□□ 0.87
SCNN1A-214ENST00000539953 CDK11AQ9UQ88 783 aaPredicted RBP20.47■□□□□ 0.87
SCNN1A-214ENST00000539953 EFCAB2Q5VUJ9 269 aa20.46■□□□□ 0.87
SCNN1A-214ENST00000539953 KDM5CP41229 1560 aa20.45■□□□□ 0.86
SCNN1A-214ENST00000539953 ATP10AO60312 1499 aa20.44■□□□□ 0.86
SCNN1A-214ENST00000539953 ARHGAP5Q13017 1502 aa20.44■□□□□ 0.86
SCNN1A-214ENST00000539953 CLIP1P30622 1438 aa20.43■□□□□ 0.86
SCNN1A-214ENST00000539953 CASKIN1Q8WXD9 1431 aa20.43■□□□□ 0.86
SCNN1A-214ENST00000539953 ARHGEF12Q9NZN5 1544 aa20.43■□□□□ 0.86
SCNN1A-214ENST00000539953 C9orf84Q5VXU9 1444 aa20.42■□□□□ 0.86
SCNN1A-214ENST00000539953 ZNF518AQ6AHZ1 1483 aa20.42■□□□□ 0.86
SCNN1A-214ENST00000539953 PREX2Q70Z35 1606 aa20.42■□□□□ 0.86
SCNN1A-214ENST00000539953 CDC42BPAQ5VT25 1732 aa20.39■□□□□ 0.86
SCNN1A-214ENST00000539953 CCDC18Q5T9S5 1454 aa20.39■□□□□ 0.85
SCNN1A-214ENST00000539953 MLECQ14165 292 aa20.39■□□□□ 0.85
SCNN1A-214ENST00000539953 DIP2CQ9Y2E4 1556 aa20.38■□□□□ 0.85
SCNN1A-214ENST00000539953 AFAP1Q8N556 730 aa20.38■□□□□ 0.85
SCNN1A-214ENST00000539953 ITSN2Q9NZM3 1697 aa20.37■□□□□ 0.85
SCNN1A-214ENST00000539953 ABCC1P33527 1531 aa20.37■□□□□ 0.85
SCNN1A-214ENST00000539953 ABCA6Q8N139 1617 aa20.36■□□□□ 0.85
SCNN1A-214ENST00000539953 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
SCNN1A-214ENST00000539953 HSPA2P54652 639 aa20.35■□□□□ 0.85
SCNN1A-214ENST00000539953 REREQ9P2R6 1566 aa20.34■□□□□ 0.85
SCNN1A-214ENST00000539953 FYCO1Q9BQS8 1478 aa20.34■□□□□ 0.85
SCNN1A-214ENST00000539953 MLH3Q9UHC1 1453 aa20.33■□□□□ 0.85
SCNN1A-214ENST00000539953 PREX1Q8TCU6 1659 aa20.32■□□□□ 0.84
SCNN1A-214ENST00000539953 FBXO41Q8TF61 875 aa20.32■□□□□ 0.84
SCNN1A-214ENST00000539953 TRAPPC8Q9Y2L5 1435 aa20.32■□□□□ 0.84
SCNN1A-214ENST00000539953 KIDINS220Q9ULH0 1771 aa20.31■□□□□ 0.84
SCNN1A-214ENST00000539953 SAMD9LQ8IVG5 1584 aa20.27■□□□□ 0.84
SCNN1A-214ENST00000539953 CEBPAP49715 358 aaPredicted RBP20.27■□□□□ 0.84
SCNN1A-214ENST00000539953 AGLP35573 1532 aa20.27■□□□□ 0.83
SCNN1A-214ENST00000539953 SETD1BQ9UPS6 1966 aaKnown RBP20.26■□□□□ 0.83
SCNN1A-214ENST00000539953 C3P01024 1663 aa20.26■□□□□ 0.83
SCNN1A-214ENST00000539953 STRCQ7RTU9 1775 aa20.24■□□□□ 0.83
SCNN1A-214ENST00000539953 GPATCH8Q9UKJ3 1502 aaKnown RBP20.23■□□□□ 0.83
SCNN1A-214ENST00000539953 MYT1LQ9UL68 1186 aa20.23■□□□□ 0.83
SCNN1A-214ENST00000539953 SYCP2Q9BX26 1530 aa20.21■□□□□ 0.83
SCNN1A-214ENST00000539953 ZNF777Q9ULD5 760 aaPredicted RBP20.16■□□□□ 0.82
SCNN1A-214ENST00000539953 UHRF1BP1Q6BDS2 1440 aa20.15■□□□□ 0.82
SCNN1A-214ENST00000539953 INO80Q9ULG1 1556 aaPredicted RBP20.15■□□□□ 0.82
SCNN1A-214ENST00000539953 SUPT6HQ7KZ85 1726 aaKnown RBP20.15■□□□□ 0.82
SCNN1A-214ENST00000539953 HNRNPMP52272 730 aaKnown RBP eCLIP20.14■□□□□ 0.81
SCNN1A-214ENST00000539953 MROH2AA6NES4 1674 aa20.13■□□□□ 0.81
SCNN1A-214ENST00000539953 ATP7AQ04656 1500 aa20.13■□□□□ 0.81
SCNN1A-214ENST00000539953 KIAA1107Q9UPP5 1409 aa20.13■□□□□ 0.81
SCNN1A-214ENST00000539953 PLXNC1O60486 1568 aa20.12■□□□□ 0.81
SCNN1A-214ENST00000539953 TIAM1Q13009 1591 aa20.12■□□□□ 0.81
SCNN1A-214ENST00000539953 CERKQ8TCT0 537 aa20.11■□□□□ 0.81
SCNN1A-214ENST00000539953 CCNB3Q8WWL7 1395 aa20.1■□□□□ 0.81
SCNN1A-214ENST00000539953 SPAG9O60271 1321 aaKnown RBP20.1■□□□□ 0.81
SCNN1A-214ENST00000539953 PLEKHH2Q8IVE3 1493 aa20.1■□□□□ 0.81
SCNN1A-214ENST00000539953 CNTLNQ9NXG0 1405 aa20.1■□□□□ 0.81
SCNN1A-214ENST00000539953 MTUS2Q5JR59 1369 aa20.09■□□□□ 0.81
SCNN1A-214ENST00000539953 CFDP1Q9UEE9 299 aaPredicted RBP20.09■□□□□ 0.81
SCNN1A-214ENST00000539953 EHBP1L1Q8N3D4 1523 aa20.07■□□□□ 0.8
SCNN1A-214ENST00000539953 CLTCQ00610 1675 aaKnown RBP20.07■□□□□ 0.8
SCNN1A-214ENST00000539953 ESF1Q9H501 851 aaKnown RBP20.06■□□□□ 0.8
SCNN1A-214ENST00000539953 ADGBQ8N7X0 1667 aa20.06■□□□□ 0.8
SCNN1A-214ENST00000539953 A2MP01023 1474 aa20.05■□□□□ 0.8
SCNN1A-214ENST00000539953 CEP162Q5TB80 1403 aa20.05■□□□□ 0.8
SCNN1A-214ENST00000539953 MBD5Q9P267 1494 aa20.05■□□□□ 0.8
SCNN1A-214ENST00000539953 ZNF644Q9H582 1327 aaPredicted RBP20.04■□□□□ 0.8
SCNN1A-214ENST00000539953 NPATQ14207 1427 aa20.03■□□□□ 0.8
SCNN1A-214ENST00000539953 DMRT2Q9Y5R5 561 aa20.03■□□□□ 0.8
SCNN1A-214ENST00000539953 PTPRTO14522 1441 aa20.02■□□□□ 0.8
SCNN1A-214ENST00000539953 ZMYM3Q14202 1370 aa20.02■□□□□ 0.8
SCNN1A-214ENST00000539953 NCOA1Q15788 1441 aa20.01■□□□□ 0.79
SCNN1A-214ENST00000539953 ZNF142P52746 1687 aaPredicted RBP19.99■□□□□ 0.79
SCNN1A-214ENST00000539953 MYO3AQ8NEV4 1616 aa19.98■□□□□ 0.79
SCNN1A-214ENST00000539953 CAMSAP1Q5T5Y3 1602 aa19.98■□□□□ 0.79
SCNN1A-214ENST00000539953 LTBP4Q8N2S1 1624 aa19.97■□□□□ 0.79
SCNN1A-214ENST00000539953 RTEL1-TNFRSF6BF6WH68 1400 aa19.96■□□□□ 0.79
SCNN1A-214ENST00000539953 PTPRKQ15262 1439 aa19.95■□□□□ 0.78
SCNN1A-214ENST00000539953 NCOA2Q15596 1464 aa19.95■□□□□ 0.78
SCNN1A-214ENST00000539953 GGT6Q6P531 493 aa19.93■□□□□ 0.78
SCNN1A-214ENST00000539953 CAMSAP2Q08AD1 1489 aa19.92■□□□□ 0.78
SCNN1A-214ENST00000539953 CEP170BQ9Y4F5 1589 aaPredicted RBP19.92■□□□□ 0.78
SCNN1A-214ENST00000539953 DHX29Q7Z478 1369 aaKnown RBP19.91■□□□□ 0.78
SCNN1A-214ENST00000539953 CCDC141Q6ZP82 1450 aa19.91■□□□□ 0.78
SCNN1A-214ENST00000539953 PPP6R1Q9UPN7 881 aa19.9■□□□□ 0.78
SCNN1A-214ENST00000539953 ARHGEF5Q12774 1597 aa19.87■□□□□ 0.77
SCNN1A-214ENST00000539953 PLA2R1Q13018 1463 aa19.87■□□□□ 0.77
SCNN1A-214ENST00000539953 NCKAP5LQ9HCH0 1330 aa19.87■□□□□ 0.77
SCNN1A-214ENST00000539953 TCOF1Q13428 1488 aaKnown RBP19.86■□□□□ 0.77
SCNN1A-214ENST00000539953 DNMT1P26358 1616 aaKnown RBP19.85■□□□□ 0.77
SCNN1A-214ENST00000539953 IQSEC2Q5JU85 1478 aa19.85■□□□□ 0.77
SCNN1A-214ENST00000539953 LRRC9Q6ZRR7 1453 aa19.85■□□□□ 0.77
SCNN1A-214ENST00000539953 VPS8Q8N3P4 1428 aa19.85■□□□□ 0.77
SCNN1A-214ENST00000539953 LOC105371045A0A1W2PR82 267 aa19.83■□□□□ 0.77
SCNN1A-214ENST00000539953 KDM5DQ9BY66 1539 aa19.82■□□□□ 0.76
SCNN1A-214ENST00000539953 FAM135AQ9P2D6 1515 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms