RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 PREX2Q70Z35 1606 aa17.6■□□□□ 0.41
VTN-202ENST00000539746 ABCA9Q8IUA7 1624 aa17.59■□□□□ 0.41
VTN-202ENST00000539746 ARHGAP5Q13017 1502 aa17.59■□□□□ 0.41
VTN-202ENST00000539746 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.59■□□□□ 0.41
VTN-202ENST00000539746 KIAA1107Q9UPP5 1409 aa17.59■□□□□ 0.41
VTN-202ENST00000539746 AKNAQ7Z591 1439 aa17.58■□□□□ 0.41
VTN-202ENST00000539746 TSPY4P0CV99 314 aa17.58■□□□□ 0.4
VTN-202ENST00000539746 TSPY10P0CW01 314 aa17.58■□□□□ 0.4
VTN-202ENST00000539746 HRCP23327 699 aa17.58■□□□□ 0.4
VTN-202ENST00000539746 CAMSAP2Q08AD1 1489 aa17.56■□□□□ 0.4
VTN-202ENST00000539746 ROCK1Q13464 1354 aa17.55■□□□□ 0.4
VTN-202ENST00000539746 GLI2P10070 1586 aa17.55■□□□□ 0.4
VTN-202ENST00000539746 SHANK2Q9UPX8 1470 aa17.55■□□□□ 0.4
VTN-202ENST00000539746 CDC42BPAQ5VT25 1732 aa17.53■□□□□ 0.4
VTN-202ENST00000539746 ZNF777Q9ULD5 760 aaPredicted RBP17.53■□□□□ 0.4
VTN-202ENST00000539746 CD109Q6YHK3 1445 aa17.53■□□□□ 0.4
VTN-202ENST00000539746 ARHGEF5Q12774 1597 aa17.53■□□□□ 0.4
VTN-202ENST00000539746 TEX14Q8IWB6 1497 aa17.52■□□□□ 0.4
VTN-202ENST00000539746 TTC37Q6PGP7 1564 aa17.52■□□□□ 0.39
VTN-202ENST00000539746 DNAJC5Q9H3Z4 198 aa17.51■□□□□ 0.39
VTN-202ENST00000539746 ANKRD30AQ9BXX3 1397 aa17.51■□□□□ 0.39
VTN-202ENST00000539746 DNMT1P26358 1616 aaKnown RBP17.5■□□□□ 0.39
VTN-202ENST00000539746 CCDC141Q6ZP82 1450 aa17.5■□□□□ 0.39
VTN-202ENST00000539746 NEO1Q92859 1461 aa17.5■□□□□ 0.39
VTN-202ENST00000539746 DAPK1P53355 1430 aa17.5■□□□□ 0.39
VTN-202ENST00000539746 FANCAO15360 1455 aa17.5■□□□□ 0.39
VTN-202ENST00000539746 ZEB1P37275 1124 aaPredicted RBP17.49■□□□□ 0.39
VTN-202ENST00000539746 HFM1A2PYH4 1435 aa17.48■□□□□ 0.39
VTN-202ENST00000539746 ITGAEP38570 1179 aa17.48■□□□□ 0.39
VTN-202ENST00000539746 SETD5Q9C0A6 1442 aa17.47■□□□□ 0.39
VTN-202ENST00000539746 CLSPNQ9HAW4 1339 aa17.45■□□□□ 0.38
VTN-202ENST00000539746 CDC42BPBQ9Y5S2 1711 aa17.44■□□□□ 0.38
VTN-202ENST00000539746 ADGRL2O95490 1459 aa17.44■□□□□ 0.38
VTN-202ENST00000539746 RTEL1-TNFRSF6BF6WH68 1400 aa17.42■□□□□ 0.38
VTN-202ENST00000539746 ABCC5O15440 1437 aa17.42■□□□□ 0.38
VTN-202ENST00000539746 FAM69CQ0P6D2 419 aa17.42■□□□□ 0.38
VTN-202ENST00000539746 ADGRL1O94910 1474 aa17.42■□□□□ 0.38
VTN-202ENST00000539746 ZNF518AQ6AHZ1 1483 aa17.42■□□□□ 0.38
VTN-202ENST00000539746 ABCC1P33527 1531 aa17.42■□□□□ 0.38
VTN-202ENST00000539746 SAMD9LQ8IVG5 1584 aa17.41■□□□□ 0.38
VTN-202ENST00000539746 C9orf84Q5VXU9 1444 aa17.41■□□□□ 0.38
VTN-202ENST00000539746 DIP2BQ9P265 1576 aa17.4■□□□□ 0.38
VTN-202ENST00000539746 MAST1Q9Y2H9 1570 aa17.4■□□□□ 0.38
VTN-202ENST00000539746 ADGBQ8N7X0 1667 aa17.4■□□□□ 0.38
VTN-202ENST00000539746 MAP3K4Q9Y6R4 1608 aa17.39■□□□□ 0.38
VTN-202ENST00000539746 CROCC2H7BZ55 1655 aa17.39■□□□□ 0.37
VTN-202ENST00000539746 MBD5Q9P267 1494 aa17.39■□□□□ 0.37
VTN-202ENST00000539746 SYCP2Q9BX26 1530 aa17.39■□□□□ 0.37
VTN-202ENST00000539746 CCER1Q8TC90 406 aaPredicted RBP17.37■□□□□ 0.37
VTN-202ENST00000539746 SPAG9O60271 1321 aaKnown RBP17.37■□□□□ 0.37
VTN-202ENST00000539746 ZNF644Q9H582 1327 aaPredicted RBP17.37■□□□□ 0.37
VTN-202ENST00000539746 NCOA1Q15788 1441 aa17.36■□□□□ 0.37
VTN-202ENST00000539746 SCAPERQ9BY12 1400 aa17.36■□□□□ 0.37
VTN-202ENST00000539746 HNRNPMP52272 730 aaKnown RBP eCLIP17.35■□□□□ 0.37
VTN-202ENST00000539746 NAIPQ13075 1403 aa17.35■□□□□ 0.37
VTN-202ENST00000539746 DENND4BO75064 1496 aaPredicted RBP17.35■□□□□ 0.37
VTN-202ENST00000539746 GCC2Q8IWJ2 1684 aa17.35■□□□□ 0.37
VTN-202ENST00000539746 PLXNC1O60486 1568 aa17.34■□□□□ 0.37
VTN-202ENST00000539746 RAB3GAP2Q9H2M9 1393 aa17.34■□□□□ 0.37
VTN-202ENST00000539746 KIF15Q9NS87 1388 aa17.32■□□□□ 0.36
VTN-202ENST00000539746 POGZQ7Z3K3 1410 aa17.31■□□□□ 0.36
VTN-202ENST00000539746 CHIC2Q9UKJ5 165 aa17.31■□□□□ 0.36
VTN-202ENST00000539746 MYT1LQ9UL68 1186 aa17.31■□□□□ 0.36
VTN-202ENST00000539746 DUOX2Q9NRD8 1548 aa17.31■□□□□ 0.36
VTN-202ENST00000539746 MAGI2Q86UL8 1455 aa17.31■□□□□ 0.36
VTN-202ENST00000539746 ERBINQ96RT1 1412 aa17.3■□□□□ 0.36
VTN-202ENST00000539746 ANKRD50Q9ULJ7 1429 aa17.3■□□□□ 0.36
VTN-202ENST00000539746 PTPRKQ15262 1439 aa17.29■□□□□ 0.36
VTN-202ENST00000539746 MLH3Q9UHC1 1453 aa17.28■□□□□ 0.36
VTN-202ENST00000539746 RRP7BPQ9NSQ0 103 aa17.27■□□□□ 0.36
VTN-202ENST00000539746 ATP7AQ04656 1500 aa17.26■□□□□ 0.35
VTN-202ENST00000539746 KDM5CP41229 1560 aa17.25■□□□□ 0.35
VTN-202ENST00000539746 TRAPPC8Q9Y2L5 1435 aa17.23■□□□□ 0.35
VTN-202ENST00000539746 ZFYVE16Q7Z3T8 1539 aa17.23■□□□□ 0.35
VTN-202ENST00000539746 TRIM52Q96A61 297 aa17.23■□□□□ 0.35
VTN-202ENST00000539746 KANK1Q14678 1352 aa17.23■□□□□ 0.35
VTN-202ENST00000539746 HECW2Q9P2P5 1572 aa17.23■□□□□ 0.35
VTN-202ENST00000539746 ARHGEF12Q9NZN5 1544 aa17.22■□□□□ 0.35
VTN-202ENST00000539746 INO80Q9ULG1 1556 aaPredicted RBP17.22■□□□□ 0.35
VTN-202ENST00000539746 TRHP20396 242 aaPredicted RBP17.21■□□□□ 0.35
VTN-202ENST00000539746 TIMELESSQ9UNS1 1208 aa17.21■□□□□ 0.35
VTN-202ENST00000539746 AFAP1Q8N556 730 aa17.2■□□□□ 0.34
VTN-202ENST00000539746 ZMYM4Q5VZL5 1548 aa17.2■□□□□ 0.34
VTN-202ENST00000539746 DHX29Q7Z478 1369 aaKnown RBP17.19■□□□□ 0.34
VTN-202ENST00000539746 EIF2AK4Q9P2K8 1649 aaKnown RBP17.19■□□□□ 0.34
VTN-202ENST00000539746 KIF13AQ9H1H9 1805 aa17.18■□□□□ 0.34
VTN-202ENST00000539746 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
VTN-202ENST00000539746 PPP6R1Q9UPN7 881 aa17.15■□□□□ 0.34
VTN-202ENST00000539746 A2MP01023 1474 aa17.15■□□□□ 0.34
VTN-202ENST00000539746 KDM5DQ9BY66 1539 aa17.15■□□□□ 0.34
VTN-202ENST00000539746 SLC4A1APQ9BWU0 796 aaKnown RBP17.14■□□□□ 0.33
VTN-202ENST00000539746 NUP155O75694 1391 aa17.14■□□□□ 0.33
VTN-202ENST00000539746 FAM135AQ9P2D6 1515 aa17.13■□□□□ 0.33
VTN-202ENST00000539746 RICTORQ6R327 1708 aa17.12■□□□□ 0.33
VTN-202ENST00000539746 MPHOSPH9Q99550 1183 aa17.11■□□□□ 0.33
VTN-202ENST00000539746 UNC13BO14795 1591 aa17.11■□□□□ 0.33
VTN-202ENST00000539746 REREQ9P2R6 1566 aa17.11■□□□□ 0.33
VTN-202ENST00000539746 PPRC1Q5VV67 1664 aaKnown RBP17.1■□□□□ 0.33
VTN-202ENST00000539746 TSPOAP1O95153 1857 aa17.1■□□□□ 0.33
VTN-202ENST00000539746 RAPGEF3O95398 923 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms