RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 YEATS2Q9ULM3 1422 aa27.11■■□□□ 1.93
DDB1-215ENST00000539712 ADAMTSL3P82987 1691 aa27.1■■□□□ 1.93
DDB1-215ENST00000539712 CEP162Q5TB80 1403 aa27.09■■□□□ 1.93
DDB1-215ENST00000539712 MAGI2Q86UL8 1455 aa27.08■■□□□ 1.93
DDB1-215ENST00000539712 ARHGAP5Q13017 1502 aa27.08■■□□□ 1.93
DDB1-215ENST00000539712 CDC42BPBQ9Y5S2 1711 aa27.07■■□□□ 1.92
DDB1-215ENST00000539712 LOC105371045A0A1W2PR82 267 aa27.06■■□□□ 1.92
DDB1-215ENST00000539712 ZFYVE16Q7Z3T8 1539 aa27.06■■□□□ 1.92
DDB1-215ENST00000539712 BCORL1Q5H9F3 1711 aa27.04■■□□□ 1.92
DDB1-215ENST00000539712 ARID4BQ4LE39 1312 aaPredicted RBP27.04■■□□□ 1.92
DDB1-215ENST00000539712 SIGLEC1Q9BZZ2 1709 aa27.04■■□□□ 1.92
DDB1-215ENST00000539712 PREX2Q70Z35 1606 aa27.02■■□□□ 1.92
DDB1-215ENST00000539712 AFAP1Q8N556 730 aa27.02■■□□□ 1.92
DDB1-215ENST00000539712 ARHGEF12Q9NZN5 1544 aa27■■□□□ 1.91
DDB1-215ENST00000539712 PTPRMP28827 1452 aa27■■□□□ 1.91
DDB1-215ENST00000539712 ZNF518AQ6AHZ1 1483 aa26.99■■□□□ 1.91
DDB1-215ENST00000539712 CDC42BPAQ5VT25 1732 aa26.99■■□□□ 1.91
DDB1-215ENST00000539712 KDM5CP41229 1560 aa26.98■■□□□ 1.91
DDB1-215ENST00000539712 GPATCH8Q9UKJ3 1502 aaKnown RBP26.97■■□□□ 1.91
DDB1-215ENST00000539712 MADDQ8WXG6 1647 aa26.96■■□□□ 1.91
DDB1-215ENST00000539712 ATP10AO60312 1499 aa26.95■■□□□ 1.91
DDB1-215ENST00000539712 TRAPPC8Q9Y2L5 1435 aa26.95■■□□□ 1.9
DDB1-215ENST00000539712 ABCC1P33527 1531 aa26.95■■□□□ 1.9
DDB1-215ENST00000539712 HECW2Q9P2P5 1572 aa26.94■■□□□ 1.9
DDB1-215ENST00000539712 MTUS2Q5JR59 1369 aa26.9■■□□□ 1.9
DDB1-215ENST00000539712 MLH3Q9UHC1 1453 aa26.89■■□□□ 1.9
DDB1-215ENST00000539712 C9orf84Q5VXU9 1444 aa26.89■■□□□ 1.89
DDB1-215ENST00000539712 ITSN2Q9NZM3 1697 aa26.88■■□□□ 1.89
DDB1-215ENST00000539712 SAMD9LQ8IVG5 1584 aa26.87■■□□□ 1.89
DDB1-215ENST00000539712 ZNF777Q9ULD5 760 aaPredicted RBP26.85■■□□□ 1.89
DDB1-215ENST00000539712 DIP2CQ9Y2E4 1556 aa26.84■■□□□ 1.89
DDB1-215ENST00000539712 MLECQ14165 292 aa26.84■■□□□ 1.89
DDB1-215ENST00000539712 RIMS1Q86UR5 1692 aaKnown RBP26.84■■□□□ 1.89
DDB1-215ENST00000539712 CCNB3Q8WWL7 1395 aa26.84■■□□□ 1.89
DDB1-215ENST00000539712 CFDP1Q9UEE9 299 aaPredicted RBP26.83■■□□□ 1.89
DDB1-215ENST00000539712 EHBP1L1Q8N3D4 1523 aa26.82■■□□□ 1.88
DDB1-215ENST00000539712 ABCA6Q8N139 1617 aa26.81■■□□□ 1.88
DDB1-215ENST00000539712 HNRNPMP52272 730 aaKnown RBP eCLIP26.81■■□□□ 1.88
DDB1-215ENST00000539712 KIAA1107Q9UPP5 1409 aa26.8■■□□□ 1.88
DDB1-215ENST00000539712 SYCP2Q9BX26 1530 aa26.8■■□□□ 1.88
DDB1-215ENST00000539712 REREQ9P2R6 1566 aa26.8■■□□□ 1.88
DDB1-215ENST00000539712 VPS8Q8N3P4 1428 aa26.79■■□□□ 1.88
DDB1-215ENST00000539712 TIAM1Q13009 1591 aa26.79■■□□□ 1.88
DDB1-215ENST00000539712 KIDINS220Q9ULH0 1771 aa26.79■■□□□ 1.88
DDB1-215ENST00000539712 MYT1LQ9UL68 1186 aa26.78■■□□□ 1.88
DDB1-215ENST00000539712 ZNF644Q9H582 1327 aaPredicted RBP26.76■■□□□ 1.87
DDB1-215ENST00000539712 PLEKHH2Q8IVE3 1493 aa26.74■■□□□ 1.87
DDB1-215ENST00000539712 FER1L4A9Z1Z3 1794 aa26.74■■□□□ 1.87
DDB1-215ENST00000539712 AGLP35573 1532 aa26.72■■□□□ 1.87
DDB1-215ENST00000539712 SPAG9O60271 1321 aaKnown RBP26.71■■□□□ 1.87
DDB1-215ENST00000539712 NCOA2Q15596 1464 aa26.71■■□□□ 1.87
DDB1-215ENST00000539712 LMTK3Q96Q04 1460 aa26.71■■□□□ 1.87
DDB1-215ENST00000539712 MBD5Q9P267 1494 aa26.69■■□□□ 1.86
DDB1-215ENST00000539712 PLPPR3Q6T4P5 718 aa26.69■■□□□ 1.86
DDB1-215ENST00000539712 LRRC9Q6ZRR7 1453 aa26.66■■□□□ 1.86
DDB1-215ENST00000539712 SUPT6HQ7KZ85 1726 aaKnown RBP26.65■■□□□ 1.86
DDB1-215ENST00000539712 CEBPAP49715 358 aaPredicted RBP26.65■■□□□ 1.86
DDB1-215ENST00000539712 KANK4Q5T7N3 995 aaPredicted RBP26.65■■□□□ 1.86
DDB1-215ENST00000539712 INO80Q9ULG1 1556 aaPredicted RBP26.65■■□□□ 1.86
DDB1-215ENST00000539712 ATP7AQ04656 1500 aa26.65■■□□□ 1.86
DDB1-215ENST00000539712 MAP3K1Q13233 1512 aa26.63■■□□□ 1.85
DDB1-215ENST00000539712 HSPA2P54652 639 aa26.58■■□□□ 1.85
DDB1-215ENST00000539712 PLXNC1O60486 1568 aa26.57■■□□□ 1.84
DDB1-215ENST00000539712 CAMSAP2Q08AD1 1489 aa26.56■■□□□ 1.84
DDB1-215ENST00000539712 A2MP01023 1474 aa26.55■■□□□ 1.84
DDB1-215ENST00000539712 RTEL1-TNFRSF6BF6WH68 1400 aa26.55■■□□□ 1.84
DDB1-215ENST00000539712 C3P01024 1663 aa26.5■■□□□ 1.83
DDB1-215ENST00000539712 CCDC141Q6ZP82 1450 aa26.5■■□□□ 1.83
DDB1-215ENST00000539712 RSPH4AQ5TD94 716 aa26.49■■□□□ 1.83
DDB1-215ENST00000539712 CNTLNQ9NXG0 1405 aa26.48■■□□□ 1.83
DDB1-215ENST00000539712 ADGBQ8N7X0 1667 aa26.47■■□□□ 1.83
DDB1-215ENST00000539712 SETD1BQ9UPS6 1966 aaKnown RBP26.46■■□□□ 1.83
DDB1-215ENST00000539712 ESF1Q9H501 851 aaKnown RBP26.46■■□□□ 1.83
DDB1-215ENST00000539712 PREX1Q8TCU6 1659 aa26.46■■□□□ 1.83
DDB1-215ENST00000539712 ARHGEF5Q12774 1597 aa26.46■■□□□ 1.83
DDB1-215ENST00000539712 DHX29Q7Z478 1369 aaKnown RBP26.46■■□□□ 1.83
DDB1-215ENST00000539712 MYOM3Q5VTT5 1437 aa26.44■■□□□ 1.82
DDB1-215ENST00000539712 ILDR1Q86SU0 546 aaPredicted RBP26.43■■□□□ 1.82
DDB1-215ENST00000539712 ZMYM3Q14202 1370 aa26.43■■□□□ 1.82
DDB1-215ENST00000539712 MIA2Q96PC5 1412 aa26.42■■□□□ 1.82
DDB1-215ENST00000539712 GGT6Q6P531 493 aa26.42■■□□□ 1.82
DDB1-215ENST00000539712 MROH2AA6NES4 1674 aa26.41■■□□□ 1.82
DDB1-215ENST00000539712 UHRF1BP1Q6BDS2 1440 aa26.39■■□□□ 1.82
DDB1-215ENST00000539712 PPP6R1Q9UPN7 881 aa26.38■■□□□ 1.81
DDB1-215ENST00000539712 TSPY4P0CV99 314 aa26.37■■□□□ 1.81
DDB1-215ENST00000539712 TSPY10P0CW01 314 aa26.37■■□□□ 1.81
DDB1-215ENST00000539712 CLTCQ00610 1675 aaKnown RBP26.37■■□□□ 1.81
DDB1-215ENST00000539712 APLP2Q06481 763 aa26.36■■□□□ 1.81
DDB1-215ENST00000539712 NPATQ14207 1427 aa26.35■■□□□ 1.81
DDB1-215ENST00000539712 KIF3BO15066 747 aa26.33■■□□□ 1.81
DDB1-215ENST00000539712 MAST1Q9Y2H9 1570 aa26.33■■□□□ 1.8
DDB1-215ENST00000539712 PTPRKQ15262 1439 aa26.31■■□□□ 1.8
DDB1-215ENST00000539712 STRCQ7RTU9 1775 aa26.3■■□□□ 1.8
DDB1-215ENST00000539712 ABCC5O15440 1437 aa26.25■■□□□ 1.79
DDB1-215ENST00000539712 PTPN23Q9H3S7 1636 aa26.25■■□□□ 1.79
DDB1-215ENST00000539712 FGD6Q6ZV73 1430 aa26.24■■□□□ 1.79
DDB1-215ENST00000539712 TCOF1Q13428 1488 aaKnown RBP26.23■■□□□ 1.79
DDB1-215ENST00000539712 KDM5DQ9BY66 1539 aa26.2■■□□□ 1.79
DDB1-215ENST00000539712 FAM135AQ9P2D6 1515 aa26.19■■□□□ 1.78
DDB1-215ENST00000539712 WASHC2CQ9Y4E1 1318 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms