RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 CRISPLD2Q9H0B8 497 aa15.05■□□□□ -0
TRAV11-201ENST00000539512 C7P10643 843 aa15.04■□□□□ -0
TRAV11-201ENST00000539512 MFSD10Q14728 455 aa15□□□□□ -0.01
TRAV11-201ENST00000539512 PELP1Q8IZL8 1130 aaKnown RBP14.99□□□□□ -0.01
TRAV11-201ENST00000539512 ARHGEF1Q92888 912 aaKnown RBP14.99□□□□□ -0.01
TRAV11-201ENST00000539512 GPHNQ9NQX3 736 aaPredicted RBP14.99□□□□□ -0.01
TRAV11-201ENST00000539512 METRNQ9UJH8 293 aa14.98□□□□□ -0.01
TRAV11-201ENST00000539512 TULP1O00294 542 aaPredicted RBP14.97□□□□□ -0.01
TRAV11-201ENST00000539512 PPP1R15BQ5SWA1 713 aa14.96□□□□□ -0.01
TRAV11-201ENST00000539512 TPRNQ4KMQ1 711 aa14.94□□□□□ -0.02
TRAV11-201ENST00000539512 COLQQ9Y215 455 aaPredicted RBP14.94□□□□□ -0.02
TRAV11-201ENST00000539512 TMEM121BQ9BXQ6 578 aaPredicted RBP14.93□□□□□ -0.02
TRAV11-201ENST00000539512 C3orf67Q6ZVT6 689 aa14.9□□□□□ -0.02
TRAV11-201ENST00000539512 POTEIP0CG38 1075 aa14.86□□□□□ -0.03
TRAV11-201ENST00000539512 DSG2Q14126 1118 aa14.86□□□□□ -0.03
TRAV11-201ENST00000539512 C2orf72A6NCS6 295 aa14.85□□□□□ -0.03
TRAV11-201ENST00000539512 PRKCSHP14314 528 aaPredicted RBP14.85□□□□□ -0.03
TRAV11-201ENST00000539512 FOXK1P85037 733 aa14.85□□□□□ -0.03
TRAV11-201ENST00000539512 CAMK2BQ13554 666 aa14.85□□□□□ -0.03
TRAV11-201ENST00000539512 PLPP6Q8IY26 295 aa14.82□□□□□ -0.04
TRAV11-201ENST00000539512 SMYD5Q6GMV2 418 aa14.79□□□□□ -0.04
TRAV11-201ENST00000539512 ARIH1Q9Y4X5 557 aaPredicted RBP14.79□□□□□ -0.04
TRAV11-201ENST00000539512 POTEFA5A3E0 1075 aa14.78□□□□□ -0.04
TRAV11-201ENST00000539512 SEMA3EO15041 775 aa14.77□□□□□ -0.05
TRAV11-201ENST00000539512 KIF3CO14782 793 aa14.76□□□□□ -0.05
TRAV11-201ENST00000539512 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.75□□□□□ -0.05
TRAV11-201ENST00000539512 DPYSL4O14531 572 aa14.73□□□□□ -0.05
TRAV11-201ENST00000539512 LMOD2Q6P5Q4 547 aa14.73□□□□□ -0.05
TRAV11-201ENST00000539512 TESPA1A2RU30 521 aaPredicted RBP14.71□□□□□ -0.05
TRAV11-201ENST00000539512 EMILIN3Q9NT22 766 aa14.71□□□□□ -0.05
TRAV11-201ENST00000539512 SPDYE16A6NNV3 312 aaPredicted RBP14.7□□□□□ -0.06
TRAV11-201ENST00000539512 MAP3K9P80192 1104 aa14.7□□□□□ -0.06
TRAV11-201ENST00000539512 TMEM92Q6UXU6 159 aa14.7□□□□□ -0.06
TRAV11-201ENST00000539512 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.69□□□□□ -0.06
TRAV11-201ENST00000539512 UPF1Q92900 1129 aaKnown RBP eCLIP14.67□□□□□ -0.06
TRAV11-201ENST00000539512 ZNF316A6NFI3 1004 aaPredicted RBP14.66□□□□□ -0.06
TRAV11-201ENST00000539512 PDIA6Q15084 440 aa14.64□□□□□ -0.07
TRAV11-201ENST00000539512 TBC1D12O60347 775 aa14.62□□□□□ -0.07
TRAV11-201ENST00000539512 OXER1Q8TDS5 423 aa14.57□□□□□ -0.08
TRAV11-201ENST00000539512 SCUBE2Q9NQ36 999 aa14.57□□□□□ -0.08
TRAV11-201ENST00000539512 MLLT3P42568 568 aaPredicted RBP14.56□□□□□ -0.08
TRAV11-201ENST00000539512 MAMSTRQ6ZN01 415 aa14.56□□□□□ -0.08
TRAV11-201ENST00000539512 GRXCR2A6NFK2 248 aa14.51□□□□□ -0.09
TRAV11-201ENST00000539512 SLC34A2O95436 690 aa14.5□□□□□ -0.09
TRAV11-201ENST00000539512 PTCD2Q8WV60 388 aaKnown RBP14.5□□□□□ -0.09
TRAV11-201ENST00000539512 EVI5O60447 810 aa14.49□□□□□ -0.09
TRAV11-201ENST00000539512 SLAIN1Q8ND83 568 aa14.49□□□□□ -0.09
TRAV11-201ENST00000539512 GPIHBP1Q8IV16 184 aa14.48□□□□□ -0.09
TRAV11-201ENST00000539512 ZC3H15Q8WU90 426 aaKnown RBP14.48□□□□□ -0.09
TRAV11-201ENST00000539512 RBM26Q5T8P6 1007 aaKnown RBP14.47□□□□□ -0.09
TRAV11-201ENST00000539512 RIMBP2O15034 1052 aa14.45□□□□□ -0.1
TRAV11-201ENST00000539512 DOK7Q18PE1 504 aa14.45□□□□□ -0.1
TRAV11-201ENST00000539512 DDX12PQ92771 950 aa14.44□□□□□ -0.1
TRAV11-201ENST00000539512 PCDHGA4Q9Y5G9 962 aa14.42□□□□□ -0.1
TRAV11-201ENST00000539512 PTGER2P43116 358 aa14.41□□□□□ -0.1
TRAV11-201ENST00000539512 POTEB2H3BUK9 544 aa14.4□□□□□ -0.1
TRAV11-201ENST00000539512 POTEJP0CG39 1038 aa14.4□□□□□ -0.1
TRAV11-201ENST00000539512 ZNF710Q8N1W2 664 aa14.39□□□□□ -0.11
TRAV11-201ENST00000539512 NUTM2FA1L443 756 aa14.38□□□□□ -0.11
TRAV11-201ENST00000539512 KRI1Q8N9T8 703 aaKnown RBP14.36□□□□□ -0.11
TRAV11-201ENST00000539512 SNPHO15079 494 aa14.33□□□□□ -0.12
TRAV11-201ENST00000539512 ZMYND10O75800 440 aa14.33□□□□□ -0.12
TRAV11-201ENST00000539512 OSBPP22059 807 aa14.33□□□□□ -0.12
TRAV11-201ENST00000539512 EPAS1Q99814 870 aa14.32□□□□□ -0.12
TRAV11-201ENST00000539512 ANO8Q9HCE9 1232 aaPredicted RBP14.32□□□□□ -0.12
TRAV11-201ENST00000539512 ZSWIM6Q9HCJ5 1215 aa14.32□□□□□ -0.12
TRAV11-201ENST00000539512 PHF14O94880 888 aa14.31□□□□□ -0.12
TRAV11-201ENST00000539512 SLC24A3Q9HC58 644 aa14.29□□□□□ -0.12
TRAV11-201ENST00000539512 ARSIQ5FYB1 569 aa14.28□□□□□ -0.12
TRAV11-201ENST00000539512 BARGINQ6ZT62 677 aa14.28□□□□□ -0.12
TRAV11-201ENST00000539512 MAP3K7O43318 606 aa14.27□□□□□ -0.13
TRAV11-201ENST00000539512 FCHSD2O94868 740 aa14.27□□□□□ -0.13
TRAV11-201ENST00000539512 NUDT7P0C024 238 aa14.26□□□□□ -0.13
TRAV11-201ENST00000539512 HOXB3P14651 431 aaPredicted RBP14.26□□□□□ -0.13
TRAV11-201ENST00000539512 TYW1BQ6NUM6 668 aa14.26□□□□□ -0.13
TRAV11-201ENST00000539512 FBXW7Q969H0 707 aa14.25□□□□□ -0.13
TRAV11-201ENST00000539512 RBM33Q96EV2 1170 aaKnown RBP14.25□□□□□ -0.13
TRAV11-201ENST00000539512 JPH4Q96JJ6 628 aa14.25□□□□□ -0.13
TRAV11-201ENST00000539512 ZNF454Q8N9F8 522 aa14.23□□□□□ -0.13
TRAV11-201ENST00000539512 EN1Q05925 392 aaPredicted RBP14.22□□□□□ -0.13
TRAV11-201ENST00000539512 AK7Q96M32 723 aa14.22□□□□□ -0.13
TRAV11-201ENST00000539512 HIC1Q14526 733 aa14.21□□□□□ -0.13
TRAV11-201ENST00000539512 PCDHGA10Q9Y5H3 936 aa14.21□□□□□ -0.13
TRAV11-201ENST00000539512 GNPATO15228 680 aa14.19□□□□□ -0.14
TRAV11-201ENST00000539512 KHSRPQ92945 711 aaKnown RBP eCLIP14.19□□□□□ -0.14
TRAV11-201ENST00000539512 FOSBP53539 338 aa14.18□□□□□ -0.14
TRAV11-201ENST00000539512 NEUROD2Q15784 382 aa14.18□□□□□ -0.14
TRAV11-201ENST00000539512 GPR153Q6NV75 609 aa14.18□□□□□ -0.14
TRAV11-201ENST00000539512 PSDA5PKW4 1024 aaPredicted RBP14.17□□□□□ -0.14
TRAV11-201ENST00000539512 LHX8Q68G74 356 aa14.17□□□□□ -0.14
TRAV11-201ENST00000539512 ZDHHC16Q969W1 377 aa14.17□□□□□ -0.14
TRAV11-201ENST00000539512 GPR37O15354 613 aa14.16□□□□□ -0.14
TRAV11-201ENST00000539512 KDM4FA0A1W2PPD8 638 aa14.15□□□□□ -0.14
TRAV11-201ENST00000539512 PRIM1P49642 420 aaKnown RBP14.15□□□□□ -0.14
TRAV11-201ENST00000539512 MAP2K5Q13163 448 aa14.15□□□□□ -0.14
TRAV11-201ENST00000539512 PTGDRQ13258 359 aa14.14□□□□□ -0.15
TRAV11-201ENST00000539512 PPP4R3BQ5MIZ7 849 aa14.14□□□□□ -0.15
TRAV11-201ENST00000539512 OTUD5Q96G74 571 aa14.14□□□□□ -0.15
TRAV11-201ENST00000539512 MINK1Q8N4C8 1332 aaPredicted RBP14.14□□□□□ -0.15
TRAV11-201ENST00000539512 LHX6Q9UPM6 363 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms