RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ADAMTSL3P82987 1691 aa24.27■■□□□ 1.48
RAB40B-202ENST00000538809 CDC42BPAQ5VT25 1732 aa24.27■■□□□ 1.48
RAB40B-202ENST00000538809 ARHGAP5Q13017 1502 aa24.27■■□□□ 1.48
RAB40B-202ENST00000538809 SIGLEC1Q9BZZ2 1709 aa24.26■■□□□ 1.47
RAB40B-202ENST00000538809 ZFYVE16Q7Z3T8 1539 aa24.25■■□□□ 1.47
RAB40B-202ENST00000538809 POGZQ7Z3K3 1410 aa24.24■■□□□ 1.47
RAB40B-202ENST00000538809 SCAPERQ9BY12 1400 aa24.24■■□□□ 1.47
RAB40B-202ENST00000538809 MADDQ8WXG6 1647 aa24.21■■□□□ 1.47
RAB40B-202ENST00000538809 CEP162Q5TB80 1403 aa24.21■■□□□ 1.47
RAB40B-202ENST00000538809 YEATS2Q9ULM3 1422 aa24.2■■□□□ 1.46
RAB40B-202ENST00000538809 ITSN2Q9NZM3 1697 aa24.18■■□□□ 1.46
RAB40B-202ENST00000538809 EFCAB2Q5VUJ9 269 aa24.18■■□□□ 1.46
RAB40B-202ENST00000538809 RIMS1Q86UR5 1692 aaKnown RBP24.18■■□□□ 1.46
RAB40B-202ENST00000538809 HECW2Q9P2P5 1572 aa24.17■■□□□ 1.46
RAB40B-202ENST00000538809 ARID4BQ4LE39 1312 aaPredicted RBP24.15■■□□□ 1.46
RAB40B-202ENST00000538809 MAGI2Q86UL8 1455 aa24.15■■□□□ 1.46
RAB40B-202ENST00000538809 ABCC1P33527 1531 aa24.15■■□□□ 1.46
RAB40B-202ENST00000538809 KDM5CP41229 1560 aa24.14■■□□□ 1.45
RAB40B-202ENST00000538809 ZNF518AQ6AHZ1 1483 aa24.13■■□□□ 1.45
RAB40B-202ENST00000538809 FER1L4A9Z1Z3 1794 aa24.11■■□□□ 1.45
RAB40B-202ENST00000538809 PTPRMP28827 1452 aa24.11■■□□□ 1.45
RAB40B-202ENST00000538809 SAMD9LQ8IVG5 1584 aa24.08■■□□□ 1.45
RAB40B-202ENST00000538809 ABCA6Q8N139 1617 aa24.07■■□□□ 1.44
RAB40B-202ENST00000538809 ARHGEF12Q9NZN5 1544 aa24.07■■□□□ 1.44
RAB40B-202ENST00000538809 DIP2CQ9Y2E4 1556 aa24.06■■□□□ 1.44
RAB40B-202ENST00000538809 EHBP1L1Q8N3D4 1523 aa24.05■■□□□ 1.44
RAB40B-202ENST00000538809 C9orf84Q5VXU9 1444 aa24.04■■□□□ 1.44
RAB40B-202ENST00000538809 LOC105371045A0A1W2PR82 267 aa24.04■■□□□ 1.44
RAB40B-202ENST00000538809 ATP10AO60312 1499 aa24.04■■□□□ 1.44
RAB40B-202ENST00000538809 MTUS2Q5JR59 1369 aa24.03■■□□□ 1.44
RAB40B-202ENST00000538809 AFAP1Q8N556 730 aa24.03■■□□□ 1.44
RAB40B-202ENST00000538809 SYCP2Q9BX26 1530 aa24.03■■□□□ 1.44
RAB40B-202ENST00000538809 GPATCH8Q9UKJ3 1502 aaKnown RBP24.03■■□□□ 1.44
RAB40B-202ENST00000538809 TRAPPC8Q9Y2L5 1435 aa24.02■■□□□ 1.44
RAB40B-202ENST00000538809 KIDINS220Q9ULH0 1771 aa24.02■■□□□ 1.44
RAB40B-202ENST00000538809 TIAM1Q13009 1591 aa24.02■■□□□ 1.44
RAB40B-202ENST00000538809 MLECQ14165 292 aa23.98■■□□□ 1.43
RAB40B-202ENST00000538809 MYT1LQ9UL68 1186 aa23.98■■□□□ 1.43
RAB40B-202ENST00000538809 MLH3Q9UHC1 1453 aa23.97■■□□□ 1.43
RAB40B-202ENST00000538809 ZNF777Q9ULD5 760 aaPredicted RBP23.97■■□□□ 1.43
RAB40B-202ENST00000538809 SUPT6HQ7KZ85 1726 aaKnown RBP23.96■■□□□ 1.43
RAB40B-202ENST00000538809 REREQ9P2R6 1566 aa23.96■■□□□ 1.43
RAB40B-202ENST00000538809 CCNB3Q8WWL7 1395 aa23.96■■□□□ 1.43
RAB40B-202ENST00000538809 VPS8Q8N3P4 1428 aa23.93■■□□□ 1.42
RAB40B-202ENST00000538809 PLPPR3Q6T4P5 718 aa23.91■■□□□ 1.42
RAB40B-202ENST00000538809 INO80Q9ULG1 1556 aaPredicted RBP23.91■■□□□ 1.42
RAB40B-202ENST00000538809 CFDP1Q9UEE9 299 aaPredicted RBP23.9■■□□□ 1.42
RAB40B-202ENST00000538809 PLEKHH2Q8IVE3 1493 aa23.88■■□□□ 1.41
RAB40B-202ENST00000538809 ATP7AQ04656 1500 aa23.88■■□□□ 1.41
RAB40B-202ENST00000538809 HNRNPMP52272 730 aaKnown RBP eCLIP23.87■■□□□ 1.41
RAB40B-202ENST00000538809 NCOA2Q15596 1464 aa23.87■■□□□ 1.41
RAB40B-202ENST00000538809 LMTK3Q96Q04 1460 aa23.86■■□□□ 1.41
RAB40B-202ENST00000538809 AGLP35573 1532 aa23.85■■□□□ 1.41
RAB40B-202ENST00000538809 KIAA1107Q9UPP5 1409 aa23.84■■□□□ 1.41
RAB40B-202ENST00000538809 C3P01024 1663 aa23.83■■□□□ 1.4
RAB40B-202ENST00000538809 PREX1Q8TCU6 1659 aa23.82■■□□□ 1.4
RAB40B-202ENST00000538809 ADGBQ8N7X0 1667 aa23.81■■□□□ 1.4
RAB40B-202ENST00000538809 SPAG9O60271 1321 aaKnown RBP23.81■■□□□ 1.4
RAB40B-202ENST00000538809 ZNF644Q9H582 1327 aaPredicted RBP23.81■■□□□ 1.4
RAB40B-202ENST00000538809 LRRC9Q6ZRR7 1453 aa23.8■■□□□ 1.4
RAB40B-202ENST00000538809 PLXNC1O60486 1568 aa23.78■■□□□ 1.4
RAB40B-202ENST00000538809 CAMSAP2Q08AD1 1489 aa23.78■■□□□ 1.4
RAB40B-202ENST00000538809 MBD5Q9P267 1494 aa23.76■■□□□ 1.39
RAB40B-202ENST00000538809 MAP3K1Q13233 1512 aa23.74■■□□□ 1.39
RAB40B-202ENST00000538809 CEBPAP49715 358 aaPredicted RBP23.73■■□□□ 1.39
RAB40B-202ENST00000538809 A2MP01023 1474 aa23.73■■□□□ 1.39
RAB40B-202ENST00000538809 MROH2AA6NES4 1674 aa23.73■■□□□ 1.39
RAB40B-202ENST00000538809 CLTCQ00610 1675 aaKnown RBP23.73■■□□□ 1.39
RAB40B-202ENST00000538809 SETD1BQ9UPS6 1966 aaKnown RBP23.72■■□□□ 1.39
RAB40B-202ENST00000538809 CCDC141Q6ZP82 1450 aa23.7■■□□□ 1.38
RAB40B-202ENST00000538809 HSPA2P54652 639 aa23.69■■□□□ 1.38
RAB40B-202ENST00000538809 ARHGEF5Q12774 1597 aa23.69■■□□□ 1.38
RAB40B-202ENST00000538809 KANK4Q5T7N3 995 aaPredicted RBP23.68■■□□□ 1.38
RAB40B-202ENST00000538809 ESF1Q9H501 851 aaKnown RBP23.65■■□□□ 1.38
RAB40B-202ENST00000538809 RTEL1-TNFRSF6BF6WH68 1400 aa23.64■■□□□ 1.37
RAB40B-202ENST00000538809 CNTLNQ9NXG0 1405 aa23.64■■□□□ 1.37
RAB40B-202ENST00000538809 MYOM3Q5VTT5 1437 aa23.61■■□□□ 1.37
RAB40B-202ENST00000538809 UHRF1BP1Q6BDS2 1440 aa23.6■■□□□ 1.37
RAB40B-202ENST00000538809 STRCQ7RTU9 1775 aa23.6■■□□□ 1.37
RAB40B-202ENST00000538809 CROCC2H7BZ55 1655 aa23.58■■□□□ 1.37
RAB40B-202ENST00000538809 MAST1Q9Y2H9 1570 aa23.57■■□□□ 1.36
RAB40B-202ENST00000538809 PTPN23Q9H3S7 1636 aa23.55■■□□□ 1.36
RAB40B-202ENST00000538809 GGT6Q6P531 493 aa23.55■■□□□ 1.36
RAB40B-202ENST00000538809 MIA2Q96PC5 1412 aa23.55■■□□□ 1.36
RAB40B-202ENST00000538809 DHX29Q7Z478 1369 aaKnown RBP23.54■■□□□ 1.36
RAB40B-202ENST00000538809 APLP2Q06481 763 aa23.54■■□□□ 1.36
RAB40B-202ENST00000538809 ILDR1Q86SU0 546 aaPredicted RBP23.54■■□□□ 1.36
RAB40B-202ENST00000538809 MYO3AQ8NEV4 1616 aa23.54■■□□□ 1.36
RAB40B-202ENST00000538809 ZMYM3Q14202 1370 aa23.52■■□□□ 1.36
RAB40B-202ENST00000538809 RSPH4AQ5TD94 716 aa23.52■■□□□ 1.36
RAB40B-202ENST00000538809 ZNF142P52746 1687 aaPredicted RBP23.51■■□□□ 1.35
RAB40B-202ENST00000538809 NPATQ14207 1427 aa23.5■■□□□ 1.35
RAB40B-202ENST00000538809 KDM5DQ9BY66 1539 aa23.48■■□□□ 1.35
RAB40B-202ENST00000538809 RNF17Q9BXT8 1623 aaKnown RBP23.48■■□□□ 1.35
RAB40B-202ENST00000538809 KIF3BO15066 747 aa23.47■■□□□ 1.35
RAB40B-202ENST00000538809 TSPY4P0CV99 314 aa23.47■■□□□ 1.35
RAB40B-202ENST00000538809 TSPY10P0CW01 314 aa23.47■■□□□ 1.35
RAB40B-202ENST00000538809 EIF2AK4Q9P2K8 1649 aaKnown RBP23.47■■□□□ 1.35
RAB40B-202ENST00000538809 PTPRKQ15262 1439 aa23.46■■□□□ 1.35
RAB40B-202ENST00000538809 DNMT1P26358 1616 aaKnown RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms