RNA–Protein interactions for RNA: ENST00000538753.5

COPS7A-209, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-209ENST00000538753 HECW2Q9P2P5 1572 aa23.54■■□□□ 1.36
COPS7A-209ENST00000538753 SCAPERQ9BY12 1400 aa23.54■■□□□ 1.36
COPS7A-209ENST00000538753 EFCAB2Q5VUJ9 269 aa23.53■■□□□ 1.36
COPS7A-209ENST00000538753 ZFYVE16Q7Z3T8 1539 aa23.53■■□□□ 1.36
COPS7A-209ENST00000538753 MAGI2Q86UL8 1455 aa23.52■■□□□ 1.36
COPS7A-209ENST00000538753 MADDQ8WXG6 1647 aa23.51■■□□□ 1.35
COPS7A-209ENST00000538753 POGZQ7Z3K3 1410 aa23.51■■□□□ 1.35
COPS7A-209ENST00000538753 SIGLEC1Q9BZZ2 1709 aa23.51■■□□□ 1.35
COPS7A-209ENST00000538753 ARHGAP5Q13017 1502 aa23.51■■□□□ 1.35
COPS7A-209ENST00000538753 ARID4BQ4LE39 1312 aaPredicted RBP23.51■■□□□ 1.35
COPS7A-209ENST00000538753 CDC42BPAQ5VT25 1732 aa23.5■■□□□ 1.35
COPS7A-209ENST00000538753 PREX2Q70Z35 1606 aa23.5■■□□□ 1.35
COPS7A-209ENST00000538753 YEATS2Q9ULM3 1422 aa23.48■■□□□ 1.35
COPS7A-209ENST00000538753 PTPRMP28827 1452 aa23.48■■□□□ 1.35
COPS7A-209ENST00000538753 RIMS1Q86UR5 1692 aaKnown RBP23.46■■□□□ 1.35
COPS7A-209ENST00000538753 ZNF518AQ6AHZ1 1483 aa23.43■■□□□ 1.34
COPS7A-209ENST00000538753 KDM5CP41229 1560 aa23.42■■□□□ 1.34
COPS7A-209ENST00000538753 ITSN2Q9NZM3 1697 aa23.41■■□□□ 1.34
COPS7A-209ENST00000538753 FER1L4A9Z1Z3 1794 aa23.4■■□□□ 1.34
COPS7A-209ENST00000538753 ATP10AO60312 1499 aa23.39■■□□□ 1.34
COPS7A-209ENST00000538753 ABCC1P33527 1531 aa23.38■■□□□ 1.33
COPS7A-209ENST00000538753 AFAP1Q8N556 730 aa23.36■■□□□ 1.33
COPS7A-209ENST00000538753 C9orf84Q5VXU9 1444 aa23.35■■□□□ 1.33
COPS7A-209ENST00000538753 CEP162Q5TB80 1403 aa23.34■■□□□ 1.33
COPS7A-209ENST00000538753 ARHGEF12Q9NZN5 1544 aa23.33■■□□□ 1.32
COPS7A-209ENST00000538753 DIP2CQ9Y2E4 1556 aa23.32■■□□□ 1.32
COPS7A-209ENST00000538753 ABCA6Q8N139 1617 aa23.31■■□□□ 1.32
COPS7A-209ENST00000538753 SAMD9LQ8IVG5 1584 aa23.31■■□□□ 1.32
COPS7A-209ENST00000538753 MLH3Q9UHC1 1453 aa23.3■■□□□ 1.32
COPS7A-209ENST00000538753 KIDINS220Q9ULH0 1771 aa23.3■■□□□ 1.32
COPS7A-209ENST00000538753 GPATCH8Q9UKJ3 1502 aaKnown RBP23.3■■□□□ 1.32
COPS7A-209ENST00000538753 TRAPPC8Q9Y2L5 1435 aa23.3■■□□□ 1.32
COPS7A-209ENST00000538753 MLECQ14165 292 aa23.29■■□□□ 1.32
COPS7A-209ENST00000538753 REREQ9P2R6 1566 aa23.29■■□□□ 1.32
COPS7A-209ENST00000538753 MYT1LQ9UL68 1186 aa23.27■■□□□ 1.32
COPS7A-209ENST00000538753 MTUS2Q5JR59 1369 aa23.27■■□□□ 1.31
COPS7A-209ENST00000538753 ZNF777Q9ULD5 760 aaPredicted RBP23.24■■□□□ 1.31
COPS7A-209ENST00000538753 LMTK3Q96Q04 1460 aa23.24■■□□□ 1.31
COPS7A-209ENST00000538753 EHBP1L1Q8N3D4 1523 aa23.23■■□□□ 1.31
COPS7A-209ENST00000538753 SYCP2Q9BX26 1530 aa23.23■■□□□ 1.31
COPS7A-209ENST00000538753 CCNB3Q8WWL7 1395 aa23.22■■□□□ 1.31
COPS7A-209ENST00000538753 SETD1BQ9UPS6 1966 aaKnown RBP23.21■■□□□ 1.31
COPS7A-209ENST00000538753 TIAM1Q13009 1591 aa23.2■■□□□ 1.3
COPS7A-209ENST00000538753 PLEKHH2Q8IVE3 1493 aa23.19■■□□□ 1.3
COPS7A-209ENST00000538753 PLPPR3Q6T4P5 718 aa23.19■■□□□ 1.3
COPS7A-209ENST00000538753 CFDP1Q9UEE9 299 aaPredicted RBP23.19■■□□□ 1.3
COPS7A-209ENST00000538753 AGLP35573 1532 aa23.18■■□□□ 1.3
COPS7A-209ENST00000538753 KIAA1107Q9UPP5 1409 aa23.18■■□□□ 1.3
COPS7A-209ENST00000538753 LOC105371045A0A1W2PR82 267 aa23.18■■□□□ 1.3
COPS7A-209ENST00000538753 SUPT6HQ7KZ85 1726 aaKnown RBP23.16■■□□□ 1.3
COPS7A-209ENST00000538753 PREX1Q8TCU6 1659 aa23.16■■□□□ 1.3
COPS7A-209ENST00000538753 HNRNPMP52272 730 aaKnown RBP eCLIP23.16■■□□□ 1.3
COPS7A-209ENST00000538753 INO80Q9ULG1 1556 aaPredicted RBP23.14■■□□□ 1.3
COPS7A-209ENST00000538753 C3P01024 1663 aa23.14■■□□□ 1.29
COPS7A-209ENST00000538753 ATP7AQ04656 1500 aa23.13■■□□□ 1.29
COPS7A-209ENST00000538753 SPAG9O60271 1321 aaKnown RBP23.12■■□□□ 1.29
COPS7A-209ENST00000538753 ADGBQ8N7X0 1667 aa23.09■■□□□ 1.29
COPS7A-209ENST00000538753 VPS8Q8N3P4 1428 aa23.09■■□□□ 1.29
COPS7A-209ENST00000538753 CEBPAP49715 358 aaPredicted RBP23.08■■□□□ 1.29
COPS7A-209ENST00000538753 ILDR1Q86SU0 546 aaPredicted RBP23.08■■□□□ 1.29
COPS7A-209ENST00000538753 NCOA2Q15596 1464 aa23.07■■□□□ 1.28
COPS7A-209ENST00000538753 HSPA2P54652 639 aa23.07■■□□□ 1.28
COPS7A-209ENST00000538753 ZNF644Q9H582 1327 aaPredicted RBP23.07■■□□□ 1.28
COPS7A-209ENST00000538753 MROH2AA6NES4 1674 aa23.06■■□□□ 1.28
COPS7A-209ENST00000538753 PLXNC1O60486 1568 aa23.06■■□□□ 1.28
COPS7A-209ENST00000538753 MBD5Q9P267 1494 aa23.05■■□□□ 1.28
COPS7A-209ENST00000538753 ESF1Q9H501 851 aaKnown RBP23.04■■□□□ 1.28
COPS7A-209ENST00000538753 A2MP01023 1474 aa23.02■■□□□ 1.28
COPS7A-209ENST00000538753 CNTLNQ9NXG0 1405 aa23.01■■□□□ 1.27
COPS7A-209ENST00000538753 LRRC9Q6ZRR7 1453 aa23.01■■□□□ 1.27
COPS7A-209ENST00000538753 MAP3K1Q13233 1512 aa23■■□□□ 1.27
COPS7A-209ENST00000538753 CLTCQ00610 1675 aaKnown RBP23■■□□□ 1.27
COPS7A-209ENST00000538753 CAMSAP2Q08AD1 1489 aa22.99■■□□□ 1.27
COPS7A-209ENST00000538753 STRCQ7RTU9 1775 aa22.98■■□□□ 1.27
COPS7A-209ENST00000538753 RTEL1-TNFRSF6BF6WH68 1400 aa22.98■■□□□ 1.27
COPS7A-209ENST00000538753 UHRF1BP1Q6BDS2 1440 aa22.98■■□□□ 1.27
COPS7A-209ENST00000538753 CCDC141Q6ZP82 1450 aa22.95■■□□□ 1.26
COPS7A-209ENST00000538753 ARHGEF5Q12774 1597 aa22.94■■□□□ 1.26
COPS7A-209ENST00000538753 RSPH4AQ5TD94 716 aa22.93■■□□□ 1.26
COPS7A-209ENST00000538753 ZMYM3Q14202 1370 aa22.9■■□□□ 1.26
COPS7A-209ENST00000538753 KANK4Q5T7N3 995 aaPredicted RBP22.9■■□□□ 1.26
COPS7A-209ENST00000538753 NPATQ14207 1427 aa22.89■■□□□ 1.25
COPS7A-209ENST00000538753 GGT6Q6P531 493 aa22.88■■□□□ 1.25
COPS7A-209ENST00000538753 DHX29Q7Z478 1369 aaKnown RBP22.88■■□□□ 1.25
COPS7A-209ENST00000538753 PPP6R1Q9UPN7 881 aa22.87■■□□□ 1.25
COPS7A-209ENST00000538753 FBXO41Q8TF61 875 aa22.85■■□□□ 1.25
COPS7A-209ENST00000538753 MYOM3Q5VTT5 1437 aa22.84■■□□□ 1.25
COPS7A-209ENST00000538753 MAST1Q9Y2H9 1570 aa22.83■■□□□ 1.25
COPS7A-209ENST00000538753 ZNF142P52746 1687 aaPredicted RBP22.83■■□□□ 1.24
COPS7A-209ENST00000538753 MIA2Q96PC5 1412 aa22.82■■□□□ 1.24
COPS7A-209ENST00000538753 MYO3AQ8NEV4 1616 aa22.82■■□□□ 1.24
COPS7A-209ENST00000538753 TSPY4P0CV99 314 aa22.82■■□□□ 1.24
COPS7A-209ENST00000538753 TSPY10P0CW01 314 aa22.82■■□□□ 1.24
COPS7A-209ENST00000538753 DMRT2Q9Y5R5 561 aa22.82■■□□□ 1.24
COPS7A-209ENST00000538753 APLP2Q06481 763 aa22.8■■□□□ 1.24
COPS7A-209ENST00000538753 PTPRKQ15262 1439 aa22.8■■□□□ 1.24
COPS7A-209ENST00000538753 KIF3BO15066 747 aa22.79■■□□□ 1.24
COPS7A-209ENST00000538753 FAM135AQ9P2D6 1515 aa22.78■■□□□ 1.24
COPS7A-209ENST00000538753 CAMSAP1Q5T5Y3 1602 aa22.77■■□□□ 1.24
COPS7A-209ENST00000538753 CROCC2H7BZ55 1655 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms