RNA–Protein interactions for RNA: ENST00000538178.5

LMNTD1-205, Transcript of lamin tail domain containing 1, humanhuman

TSL 3

Gene LMNTD1, Length 716 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-205ENST00000538178 KIF3CO14782 793 aa14.38□□□□□ -0.11
LMNTD1-205ENST00000538178 DOK7Q18PE1 504 aa14.38□□□□□ -0.11
LMNTD1-205ENST00000538178 C2orf72A6NCS6 295 aa14.35□□□□□ -0.11
LMNTD1-205ENST00000538178 GTPBP6O43824 516 aaPredicted RBP14.35□□□□□ -0.11
LMNTD1-205ENST00000538178 ZNF710Q8N1W2 664 aa14.32□□□□□ -0.12
LMNTD1-205ENST00000538178 TMC2Q8TDI7 906 aa14.32□□□□□ -0.12
LMNTD1-205ENST00000538178 PCDH10Q9P2E7 1040 aa14.32□□□□□ -0.12
LMNTD1-205ENST00000538178 RIMBP2O15034 1052 aa14.31□□□□□ -0.12
LMNTD1-205ENST00000538178 MARVELD3Q96A59 401 aa14.3□□□□□ -0.12
LMNTD1-205ENST00000538178 ZSWIM6Q9HCJ5 1215 aa14.28□□□□□ -0.12
LMNTD1-205ENST00000538178 HOXB1P14653 301 aaPredicted RBP14.27□□□□□ -0.13
LMNTD1-205ENST00000538178 EMP3P54852 163 aa14.26□□□□□ -0.13
LMNTD1-205ENST00000538178 BBXQ8WY36 941 aaPredicted RBP14.26□□□□□ -0.13
LMNTD1-205ENST00000538178 GPHNQ9NQX3 736 aaPredicted RBP14.23□□□□□ -0.13
LMNTD1-205ENST00000538178 GPR153Q6NV75 609 aa14.21□□□□□ -0.13
LMNTD1-205ENST00000538178 CDAN1Q8IWY9 1227 aa14.2□□□□□ -0.14
LMNTD1-205ENST00000538178 FOXK1P85037 733 aa14.19□□□□□ -0.14
LMNTD1-205ENST00000538178 SLC34A2O95436 690 aa14.18□□□□□ -0.14
LMNTD1-205ENST00000538178 CRISPLD2Q9H0B8 497 aa14.16□□□□□ -0.14
LMNTD1-205ENST00000538178 FAM205CA6NFA0 338 aa14.15□□□□□ -0.14
LMNTD1-205ENST00000538178 DSG2Q14126 1118 aa14.14□□□□□ -0.15
LMNTD1-205ENST00000538178 ARSIQ5FYB1 569 aa14.14□□□□□ -0.15
LMNTD1-205ENST00000538178 HS3ST6Q96QI5 342 aa14.14□□□□□ -0.15
LMNTD1-205ENST00000538178 PLPP6Q8IY26 295 aa14.13□□□□□ -0.15
LMNTD1-205ENST00000538178 POTEB3A0JP26 581 aa14.12□□□□□ -0.15
LMNTD1-205ENST00000538178 POTEBQ6S5H4 581 aa14.12□□□□□ -0.15
LMNTD1-205ENST00000538178 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.12□□□□□ -0.15
LMNTD1-205ENST00000538178 NCKAP5LQ9HCH0 1330 aa14.11□□□□□ -0.15
LMNTD1-205ENST00000538178 PDE4AP27815 886 aa14.1□□□□□ -0.15
LMNTD1-205ENST00000538178 ERBB3P21860 1342 aa14.1□□□□□ -0.15
LMNTD1-205ENST00000538178 PCDHGA4Q9Y5G9 962 aa14.09□□□□□ -0.15
LMNTD1-205ENST00000538178 SPRYD3Q8NCJ5 442 aa14.08□□□□□ -0.16
LMNTD1-205ENST00000538178 KHSRPQ92945 711 aaKnown RBP eCLIP14.08□□□□□ -0.16
LMNTD1-205ENST00000538178 PTCD2Q8WV60 388 aaKnown RBP14.06□□□□□ -0.16
LMNTD1-205ENST00000538178 PPP1R15BQ5SWA1 713 aa14.05□□□□□ -0.16
LMNTD1-205ENST00000538178 VARS2Q5ST30 1063 aaKnown RBP14.04□□□□□ -0.16
LMNTD1-205ENST00000538178 CADPS2Q86UW7 1296 aa14.03□□□□□ -0.16
LMNTD1-205ENST00000538178 NUDT7P0C024 238 aa14.02□□□□□ -0.17
LMNTD1-205ENST00000538178 LARP6Q9BRS8 491 aaKnown RBP14.02□□□□□ -0.17
LMNTD1-205ENST00000538178 MFSD10Q14728 455 aa14.01□□□□□ -0.17
LMNTD1-205ENST00000538178 ZNF316A6NFI3 1004 aaPredicted RBP14□□□□□ -0.17
LMNTD1-205ENST00000538178 DDX27Q96GQ7 796 aaKnown RBP14□□□□□ -0.17
LMNTD1-205ENST00000538178 PLSCR2Q9NRY7 297 aa14□□□□□ -0.17
LMNTD1-205ENST00000538178 PAXIP1Q6ZW49 1069 aaPredicted RBP13.98□□□□□ -0.17
LMNTD1-205ENST00000538178 KDM4FA0A1W2PPD8 638 aa13.97□□□□□ -0.17
LMNTD1-205ENST00000538178 TBC1D12O60347 775 aa13.97□□□□□ -0.17
LMNTD1-205ENST00000538178 KRTAP3-3Q9BYR6 98 aa13.97□□□□□ -0.17
LMNTD1-205ENST00000538178 KRTAP3-2Q9BYR7 98 aa13.97□□□□□ -0.17
LMNTD1-205ENST00000538178 OXER1Q8TDS5 423 aa13.96□□□□□ -0.17
LMNTD1-205ENST00000538178 CFAP44Q96MT7 982 aa13.96□□□□□ -0.17
LMNTD1-205ENST00000538178 ZNF687Q8N1G0 1237 aa13.95□□□□□ -0.18
LMNTD1-205ENST00000538178 LHX6Q9UPM6 363 aa13.94□□□□□ -0.18
LMNTD1-205ENST00000538178 UPF1Q92900 1129 aaKnown RBP eCLIP13.91□□□□□ -0.18
LMNTD1-205ENST00000538178 PSDA5PKW4 1024 aaPredicted RBP13.87□□□□□ -0.19
LMNTD1-205ENST00000538178 SPNS2Q8IVW8 549 aa13.85□□□□□ -0.19
LMNTD1-205ENST00000538178 EMILIN3Q9NT22 766 aa13.83□□□□□ -0.2
LMNTD1-205ENST00000538178 CAMK2BQ13554 666 aa13.82□□□□□ -0.2
LMNTD1-205ENST00000538178 PBX2P40425 430 aa13.8□□□□□ -0.2
LMNTD1-205ENST00000538178 MAP3K9P80192 1104 aa13.79□□□□□ -0.2
LMNTD1-205ENST00000538178 ANO8Q9HCE9 1232 aaPredicted RBP13.78□□□□□ -0.2
LMNTD1-205ENST00000538178 EVI5O60447 810 aa13.77□□□□□ -0.21
LMNTD1-205ENST00000538178 PPP4R3BQ5MIZ7 849 aa13.76□□□□□ -0.21
LMNTD1-205ENST00000538178 MMRN1Q13201 1228 aa13.75□□□□□ -0.21
LMNTD1-205ENST00000538178 POTEEQ6S8J3 1075 aa13.75□□□□□ -0.21
LMNTD1-205ENST00000538178 LSM11P83369 360 aaKnown RBP eCLIP13.73□□□□□ -0.21
LMNTD1-205ENST00000538178 ARHGAP33O14559 1287 aa13.71□□□□□ -0.21
LMNTD1-205ENST00000538178 AXIN2Q9Y2T1 843 aa13.71□□□□□ -0.21
LMNTD1-205ENST00000538178 FOSBP53539 338 aa13.7□□□□□ -0.22
LMNTD1-205ENST00000538178 ZNF454Q8N9F8 522 aa13.7□□□□□ -0.22
LMNTD1-205ENST00000538178 JPH4Q96JJ6 628 aa13.69□□□□□ -0.22
LMNTD1-205ENST00000538178 WDR70Q9NW82 654 aa13.69□□□□□ -0.22
LMNTD1-205ENST00000538178 ANKRD13DQ6ZTN6 518 aa13.68□□□□□ -0.22
LMNTD1-205ENST00000538178 TSHZ2Q9NRE2 1034 aa13.68□□□□□ -0.22
LMNTD1-205ENST00000538178 DPYSL4O14531 572 aa13.67□□□□□ -0.22
LMNTD1-205ENST00000538178 E2F4Q16254 413 aa13.66□□□□□ -0.22
LMNTD1-205ENST00000538178 PTGER2P43116 358 aa13.63□□□□□ -0.23
LMNTD1-205ENST00000538178 BCL2L12Q9HB09 334 aa13.63□□□□□ -0.23
LMNTD1-205ENST00000538178 PSEN2P49810 448 aa13.62□□□□□ -0.23
LMNTD1-205ENST00000538178 PLCB2Q00722 1185 aa13.61□□□□□ -0.23
LMNTD1-205ENST00000538178 ZDHHC16Q969W1 377 aa13.61□□□□□ -0.23
LMNTD1-205ENST00000538178 KCNH8Q96L42 1107 aa13.61□□□□□ -0.23
LMNTD1-205ENST00000538178 ARIH1Q9Y4X5 557 aaPredicted RBP13.61□□□□□ -0.23
LMNTD1-205ENST00000538178 KCNK17Q96T54 332 aa13.6□□□□□ -0.23
LMNTD1-205ENST00000538178 DMRTA1Q5VZB9 504 aa13.59□□□□□ -0.23
LMNTD1-205ENST00000538178 PCDHGA10Q9Y5H3 936 aa13.59□□□□□ -0.23
LMNTD1-205ENST00000538178 TK2O00142 265 aa13.58□□□□□ -0.24
LMNTD1-205ENST00000538178 PDIA6Q15084 440 aa13.58□□□□□ -0.24
LMNTD1-205ENST00000538178 MYT1LQ9UL68 1186 aa13.58□□□□□ -0.24
LMNTD1-205ENST00000538178 PHF14O94880 888 aa13.57□□□□□ -0.24
LMNTD1-205ENST00000538178 ADGRD1Q6QNK2 874 aa13.57□□□□□ -0.24
LMNTD1-205ENST00000538178 ADAM33Q9BZ11 813 aa13.57□□□□□ -0.24
LMNTD1-205ENST00000538178 SPDYE16A6NNV3 312 aaPredicted RBP13.56□□□□□ -0.24
LMNTD1-205ENST00000538178 PTPREP23469 700 aa13.56□□□□□ -0.24
LMNTD1-205ENST00000538178 TYW1BQ6NUM6 668 aa13.54□□□□□ -0.24
LMNTD1-205ENST00000538178 FBXW7Q969H0 707 aa13.54□□□□□ -0.24
LMNTD1-205ENST00000538178 RNF166Q96A37 237 aaPredicted RBP13.54□□□□□ -0.24
LMNTD1-205ENST00000538178 EPAS1Q99814 870 aa13.53□□□□□ -0.24
LMNTD1-205ENST00000538178 SLC4A5Q9BY07 1137 aa13.5□□□□□ -0.25
LMNTD1-205ENST00000538178 HRO43593 1189 aa13.49□□□□□ -0.25
LMNTD1-205ENST00000538178 DDX12PQ92771 950 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms