RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 POGZQ7Z3K3 1410 aa15.85■□□□□ 0.13
CHD4-207ENST00000537634 SCAPERQ9BY12 1400 aa15.85■□□□□ 0.13
CHD4-207ENST00000537634 MAGI2Q86UL8 1455 aa15.84■□□□□ 0.13
CHD4-207ENST00000537634 PCF11O94913 1555 aaKnown RBP15.84■□□□□ 0.13
CHD4-207ENST00000537634 YEATS2Q9ULM3 1422 aa15.83■□□□□ 0.12
CHD4-207ENST00000537634 RIMS1Q86UR5 1692 aaKnown RBP15.83■□□□□ 0.12
CHD4-207ENST00000537634 EFCAB2Q5VUJ9 269 aa15.82■□□□□ 0.12
CHD4-207ENST00000537634 CCDC18Q5T9S5 1454 aa15.82■□□□□ 0.12
CHD4-207ENST00000537634 ARHGAP5Q13017 1502 aa15.82■□□□□ 0.12
CHD4-207ENST00000537634 CASKIN1Q8WXD9 1431 aa15.81■□□□□ 0.12
CHD4-207ENST00000537634 SIGLEC1Q9BZZ2 1709 aa15.79■□□□□ 0.12
CHD4-207ENST00000537634 ZNF518AQ6AHZ1 1483 aa15.78■□□□□ 0.12
CHD4-207ENST00000537634 FYCO1Q9BQS8 1478 aa15.77■□□□□ 0.11
CHD4-207ENST00000537634 PREX2Q70Z35 1606 aa15.76■□□□□ 0.11
CHD4-207ENST00000537634 CDC42BPBQ9Y5S2 1711 aa15.76■□□□□ 0.11
CHD4-207ENST00000537634 FER1L4A9Z1Z3 1794 aa15.75■□□□□ 0.11
CHD4-207ENST00000537634 ATP10AO60312 1499 aa15.75■□□□□ 0.11
CHD4-207ENST00000537634 C9orf84Q5VXU9 1444 aa15.75■□□□□ 0.11
CHD4-207ENST00000537634 KDM5CP41229 1560 aa15.75■□□□□ 0.11
CHD4-207ENST00000537634 ILDR1Q86SU0 546 aaPredicted RBP15.74■□□□□ 0.11
CHD4-207ENST00000537634 MLECQ14165 292 aa15.73■□□□□ 0.11
CHD4-207ENST00000537634 LMTK3Q96Q04 1460 aa15.71■□□□□ 0.11
CHD4-207ENST00000537634 ABCC1P33527 1531 aa15.71■□□□□ 0.11
CHD4-207ENST00000537634 CDC42BPAQ5VT25 1732 aa15.71■□□□□ 0.1
CHD4-207ENST00000537634 ITSN2Q9NZM3 1697 aa15.7■□□□□ 0.1
CHD4-207ENST00000537634 PLPPR3Q6T4P5 718 aa15.7■□□□□ 0.1
CHD4-207ENST00000537634 AFAP1Q8N556 730 aa15.7■□□□□ 0.1
CHD4-207ENST00000537634 MYT1LQ9UL68 1186 aa15.7■□□□□ 0.1
CHD4-207ENST00000537634 ARHGEF12Q9NZN5 1544 aa15.69■□□□□ 0.1
CHD4-207ENST00000537634 DIP2CQ9Y2E4 1556 aa15.69■□□□□ 0.1
CHD4-207ENST00000537634 ABCA6Q8N139 1617 aa15.67■□□□□ 0.1
CHD4-207ENST00000537634 REREQ9P2R6 1566 aa15.66■□□□□ 0.1
CHD4-207ENST00000537634 MLH3Q9UHC1 1453 aa15.66■□□□□ 0.1
CHD4-207ENST00000537634 TRAPPC8Q9Y2L5 1435 aa15.66■□□□□ 0.1
CHD4-207ENST00000537634 SAMD9LQ8IVG5 1584 aa15.63■□□□□ 0.09
CHD4-207ENST00000537634 SYCP2Q9BX26 1530 aa15.62■□□□□ 0.09
CHD4-207ENST00000537634 GPATCH8Q9UKJ3 1502 aaKnown RBP15.62■□□□□ 0.09
CHD4-207ENST00000537634 KIDINS220Q9ULH0 1771 aa15.62■□□□□ 0.09
CHD4-207ENST00000537634 PREX1Q8TCU6 1659 aa15.61■□□□□ 0.09
CHD4-207ENST00000537634 HSPA2P54652 639 aa15.61■□□□□ 0.09
CHD4-207ENST00000537634 ZNF777Q9ULD5 760 aaPredicted RBP15.61■□□□□ 0.09
CHD4-207ENST00000537634 MTUS2Q5JR59 1369 aa15.61■□□□□ 0.09
CHD4-207ENST00000537634 AGLP35573 1532 aa15.6■□□□□ 0.09
CHD4-207ENST00000537634 CCNB3Q8WWL7 1395 aa15.59■□□□□ 0.09
CHD4-207ENST00000537634 CEP162Q5TB80 1403 aa15.59■□□□□ 0.09
CHD4-207ENST00000537634 PLEKHH2Q8IVE3 1493 aa15.58■□□□□ 0.08
CHD4-207ENST00000537634 EHBP1L1Q8N3D4 1523 aa15.58■□□□□ 0.08
CHD4-207ENST00000537634 CEBPAP49715 358 aaPredicted RBP15.57■□□□□ 0.08
CHD4-207ENST00000537634 CFDP1Q9UEE9 299 aaPredicted RBP15.57■□□□□ 0.08
CHD4-207ENST00000537634 ESF1Q9H501 851 aaKnown RBP15.56■□□□□ 0.08
CHD4-207ENST00000537634 C3P01024 1663 aa15.55■□□□□ 0.08
CHD4-207ENST00000537634 ATP7AQ04656 1500 aa15.55■□□□□ 0.08
CHD4-207ENST00000537634 KIAA1107Q9UPP5 1409 aa15.55■□□□□ 0.08
CHD4-207ENST00000537634 SPAG9O60271 1321 aaKnown RBP15.55■□□□□ 0.08
CHD4-207ENST00000537634 TIAM1Q13009 1591 aa15.54■□□□□ 0.08
CHD4-207ENST00000537634 HNRNPMP52272 730 aaKnown RBP eCLIP15.54■□□□□ 0.08
CHD4-207ENST00000537634 FBXO41Q8TF61 875 aa15.54■□□□□ 0.08
CHD4-207ENST00000537634 INO80Q9ULG1 1556 aaPredicted RBP15.53■□□□□ 0.08
CHD4-207ENST00000537634 UHRF1BP1Q6BDS2 1440 aa15.53■□□□□ 0.08
CHD4-207ENST00000537634 SETD1BQ9UPS6 1966 aaKnown RBP15.53■□□□□ 0.08
CHD4-207ENST00000537634 CNTLNQ9NXG0 1405 aa15.52■□□□□ 0.08
CHD4-207ENST00000537634 SUPT6HQ7KZ85 1726 aaKnown RBP15.52■□□□□ 0.08
CHD4-207ENST00000537634 PLXNC1O60486 1568 aa15.49■□□□□ 0.07
CHD4-207ENST00000537634 MROH2AA6NES4 1674 aa15.49■□□□□ 0.07
CHD4-207ENST00000537634 ADGBQ8N7X0 1667 aa15.48■□□□□ 0.07
CHD4-207ENST00000537634 A2MP01023 1474 aa15.48■□□□□ 0.07
CHD4-207ENST00000537634 STRCQ7RTU9 1775 aa15.46■□□□□ 0.07
CHD4-207ENST00000537634 ZNF644Q9H582 1327 aaPredicted RBP15.45■□□□□ 0.06
CHD4-207ENST00000537634 NCOA2Q15596 1464 aa15.45■□□□□ 0.06
CHD4-207ENST00000537634 MBD5Q9P267 1494 aa15.45■□□□□ 0.06
CHD4-207ENST00000537634 CLTCQ00610 1675 aaKnown RBP15.44■□□□□ 0.06
CHD4-207ENST00000537634 DMRT2Q9Y5R5 561 aa15.43■□□□□ 0.06
CHD4-207ENST00000537634 NPATQ14207 1427 aa15.43■□□□□ 0.06
CHD4-207ENST00000537634 VPS8Q8N3P4 1428 aa15.43■□□□□ 0.06
CHD4-207ENST00000537634 CAMSAP2Q08AD1 1489 aa15.42■□□□□ 0.06
CHD4-207ENST00000537634 RTEL1-TNFRSF6BF6WH68 1400 aa15.42■□□□□ 0.06
CHD4-207ENST00000537634 CCDC141Q6ZP82 1450 aa15.41■□□□□ 0.06
CHD4-207ENST00000537634 ZMYM3Q14202 1370 aa15.41■□□□□ 0.06
CHD4-207ENST00000537634 CERKQ8TCT0 537 aa15.41■□□□□ 0.06
CHD4-207ENST00000537634 GGT6Q6P531 493 aa15.4■□□□□ 0.06
CHD4-207ENST00000537634 LOC105371045A0A1W2PR82 267 aa15.39■□□□□ 0.05
CHD4-207ENST00000537634 MYO3AQ8NEV4 1616 aa15.38■□□□□ 0.05
CHD4-207ENST00000537634 LRRC9Q6ZRR7 1453 aa15.38■□□□□ 0.05
CHD4-207ENST00000537634 PTPRTO14522 1441 aa15.37■□□□□ 0.05
CHD4-207ENST00000537634 NCOA1Q15788 1441 aa15.37■□□□□ 0.05
CHD4-207ENST00000537634 ZNF142P52746 1687 aaPredicted RBP15.37■□□□□ 0.05
CHD4-207ENST00000537634 DHX29Q7Z478 1369 aaKnown RBP15.36■□□□□ 0.05
CHD4-207ENST00000537634 ARHGEF5Q12774 1597 aa15.36■□□□□ 0.05
CHD4-207ENST00000537634 CAMSAP1Q5T5Y3 1602 aa15.36■□□□□ 0.05
CHD4-207ENST00000537634 RSPH4AQ5TD94 716 aa15.36■□□□□ 0.05
CHD4-207ENST00000537634 PPP6R1Q9UPN7 881 aa15.36■□□□□ 0.05
CHD4-207ENST00000537634 PTPRKQ15262 1439 aa15.34■□□□□ 0.05
CHD4-207ENST00000537634 MAP3K1Q13233 1512 aa15.34■□□□□ 0.05
CHD4-207ENST00000537634 CEP170BQ9Y4F5 1589 aaPredicted RBP15.34■□□□□ 0.05
CHD4-207ENST00000537634 FAM135AQ9P2D6 1515 aa15.33■□□□□ 0.04
CHD4-207ENST00000537634 KIF3BO15066 747 aa15.32■□□□□ 0.04
CHD4-207ENST00000537634 KDM5DQ9BY66 1539 aa15.32■□□□□ 0.04
CHD4-207ENST00000537634 TSPY4P0CV99 314 aa15.31■□□□□ 0.04
CHD4-207ENST00000537634 TSPY10P0CW01 314 aa15.31■□□□□ 0.04
CHD4-207ENST00000537634 PLA2R1Q13018 1463 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms