RNA–Protein interactions for RNA: ENST00000537533.1

PTPN6-209, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-209ENST00000537533 CDC42BPAQ5VT25 1732 aa19.97■□□□□ 0.79
PTPN6-209ENST00000537533 ARHGAP5Q13017 1502 aa19.97■□□□□ 0.79
PTPN6-209ENST00000537533 ZMYM4Q5VZL5 1548 aa19.97■□□□□ 0.79
PTPN6-209ENST00000537533 SCAPERQ9BY12 1400 aa19.95■□□□□ 0.78
PTPN6-209ENST00000537533 POGZQ7Z3K3 1410 aa19.93■□□□□ 0.78
PTPN6-209ENST00000537533 VPS8Q8N3P4 1428 aa19.93■□□□□ 0.78
PTPN6-209ENST00000537533 MAGI2Q86UL8 1455 aa19.92■□□□□ 0.78
PTPN6-209ENST00000537533 ARHGEF40Q8TER5 1519 aa19.92■□□□□ 0.78
PTPN6-209ENST00000537533 MTUS2Q5JR59 1369 aa19.91■□□□□ 0.78
PTPN6-209ENST00000537533 EHBP1L1Q8N3D4 1523 aa19.91■□□□□ 0.78
PTPN6-209ENST00000537533 GPATCH8Q9UKJ3 1502 aaKnown RBP19.89■□□□□ 0.77
PTPN6-209ENST00000537533 TIAM1Q13009 1591 aa19.87■□□□□ 0.77
PTPN6-209ENST00000537533 ABCC1P33527 1531 aa19.87■□□□□ 0.77
PTPN6-209ENST00000537533 ZFYVE16Q7Z3T8 1539 aa19.87■□□□□ 0.77
PTPN6-209ENST00000537533 KDM5CP41229 1560 aa19.87■□□□□ 0.77
PTPN6-209ENST00000537533 ZNF518AQ6AHZ1 1483 aa19.86■□□□□ 0.77
PTPN6-209ENST00000537533 ITSN2Q9NZM3 1697 aa19.86■□□□□ 0.77
PTPN6-209ENST00000537533 MAP3K1Q13233 1512 aa19.84■□□□□ 0.77
PTPN6-209ENST00000537533 ARHGEF12Q9NZN5 1544 aa19.84■□□□□ 0.77
PTPN6-209ENST00000537533 YEATS2Q9ULM3 1422 aa19.84■□□□□ 0.77
PTPN6-209ENST00000537533 CCNB3Q8WWL7 1395 aa19.83■□□□□ 0.77
PTPN6-209ENST00000537533 SAMD9LQ8IVG5 1584 aa19.83■□□□□ 0.76
PTPN6-209ENST00000537533 BCORL1Q5H9F3 1711 aa19.82■□□□□ 0.76
PTPN6-209ENST00000537533 SUPT6HQ7KZ85 1726 aaKnown RBP19.82■□□□□ 0.76
PTPN6-209ENST00000537533 ADAMTSL3P82987 1691 aa19.81■□□□□ 0.76
PTPN6-209ENST00000537533 AFAP1Q8N556 730 aa19.81■□□□□ 0.76
PTPN6-209ENST00000537533 SIGLEC1Q9BZZ2 1709 aa19.79■□□□□ 0.76
PTPN6-209ENST00000537533 HECW2Q9P2P5 1572 aa19.79■□□□□ 0.76
PTPN6-209ENST00000537533 TRAPPC8Q9Y2L5 1435 aa19.79■□□□□ 0.76
PTPN6-209ENST00000537533 CFDP1Q9UEE9 299 aaPredicted RBP19.79■□□□□ 0.76
PTPN6-209ENST00000537533 LRRC9Q6ZRR7 1453 aa19.79■□□□□ 0.76
PTPN6-209ENST00000537533 MLH3Q9UHC1 1453 aa19.79■□□□□ 0.76
PTPN6-209ENST00000537533 KIAA1107Q9UPP5 1409 aa19.78■□□□□ 0.76
PTPN6-209ENST00000537533 ATP10AO60312 1499 aa19.78■□□□□ 0.76
PTPN6-209ENST00000537533 NCOA2Q15596 1464 aa19.78■□□□□ 0.76
PTPN6-209ENST00000537533 PLEKHH2Q8IVE3 1493 aa19.78■□□□□ 0.76
PTPN6-209ENST00000537533 ZNF777Q9ULD5 760 aaPredicted RBP19.76■□□□□ 0.75
PTPN6-209ENST00000537533 SYCP2Q9BX26 1530 aa19.76■□□□□ 0.75
PTPN6-209ENST00000537533 C9orf84Q5VXU9 1444 aa19.76■□□□□ 0.75
PTPN6-209ENST00000537533 ARID4BQ4LE39 1312 aaPredicted RBP19.75■□□□□ 0.75
PTPN6-209ENST00000537533 KIDINS220Q9ULH0 1771 aa19.74■□□□□ 0.75
PTPN6-209ENST00000537533 REREQ9P2R6 1566 aa19.74■□□□□ 0.75
PTPN6-209ENST00000537533 DIP2CQ9Y2E4 1556 aa19.74■□□□□ 0.75
PTPN6-209ENST00000537533 ABCA6Q8N139 1617 aa19.73■□□□□ 0.75
PTPN6-209ENST00000537533 MADDQ8WXG6 1647 aa19.71■□□□□ 0.75
PTPN6-209ENST00000537533 HNRNPMP52272 730 aaKnown RBP eCLIP19.7■□□□□ 0.74
PTPN6-209ENST00000537533 KANK4Q5T7N3 995 aaPredicted RBP19.7■□□□□ 0.74
PTPN6-209ENST00000537533 PTPRMP28827 1452 aa19.68■□□□□ 0.74
PTPN6-209ENST00000537533 MBD5Q9P267 1494 aa19.68■□□□□ 0.74
PTPN6-209ENST00000537533 ZNF644Q9H582 1327 aaPredicted RBP19.68■□□□□ 0.74
PTPN6-209ENST00000537533 MYT1LQ9UL68 1186 aa19.67■□□□□ 0.74
PTPN6-209ENST00000537533 INO80Q9ULG1 1556 aaPredicted RBP19.66■□□□□ 0.74
PTPN6-209ENST00000537533 SPAG9O60271 1321 aaKnown RBP19.66■□□□□ 0.74
PTPN6-209ENST00000537533 AGLP35573 1532 aa19.66■□□□□ 0.74
PTPN6-209ENST00000537533 RIMS1Q86UR5 1692 aaKnown RBP19.65■□□□□ 0.74
PTPN6-209ENST00000537533 ATP7AQ04656 1500 aa19.65■□□□□ 0.74
PTPN6-209ENST00000537533 FER1L4A9Z1Z3 1794 aa19.65■□□□□ 0.74
PTPN6-209ENST00000537533 APLP2Q06481 763 aa19.64■□□□□ 0.73
PTPN6-209ENST00000537533 CAMSAP2Q08AD1 1489 aa19.64■□□□□ 0.73
PTPN6-209ENST00000537533 RSPH4AQ5TD94 716 aa19.61■□□□□ 0.73
PTPN6-209ENST00000537533 MYOM3Q5VTT5 1437 aa19.6■□□□□ 0.73
PTPN6-209ENST00000537533 MIA2Q96PC5 1412 aa19.6■□□□□ 0.73
PTPN6-209ENST00000537533 MLECQ14165 292 aa19.6■□□□□ 0.73
PTPN6-209ENST00000537533 ARHGEF5Q12774 1597 aa19.6■□□□□ 0.73
PTPN6-209ENST00000537533 RTEL1-TNFRSF6BF6WH68 1400 aa19.59■□□□□ 0.73
PTPN6-209ENST00000537533 CCDC141Q6ZP82 1450 aa19.59■□□□□ 0.73
PTPN6-209ENST00000537533 ADGBQ8N7X0 1667 aa19.59■□□□□ 0.73
PTPN6-209ENST00000537533 PLXNC1O60486 1568 aa19.57■□□□□ 0.72
PTPN6-209ENST00000537533 A2MP01023 1474 aa19.55■□□□□ 0.72
PTPN6-209ENST00000537533 MAST1Q9Y2H9 1570 aa19.5■□□□□ 0.71
PTPN6-209ENST00000537533 PTPN23Q9H3S7 1636 aa19.49■□□□□ 0.71
PTPN6-209ENST00000537533 SETD1BQ9UPS6 1966 aaKnown RBP19.48■□□□□ 0.71
PTPN6-209ENST00000537533 DHX29Q7Z478 1369 aaKnown RBP19.48■□□□□ 0.71
PTPN6-209ENST00000537533 TSPY4P0CV99 314 aa19.48■□□□□ 0.71
PTPN6-209ENST00000537533 TSPY10P0CW01 314 aa19.48■□□□□ 0.71
PTPN6-209ENST00000537533 FGD6Q6ZV73 1430 aa19.47■□□□□ 0.71
PTPN6-209ENST00000537533 CNTLNQ9NXG0 1405 aa19.47■□□□□ 0.71
PTPN6-209ENST00000537533 TCOF1Q13428 1488 aaKnown RBP19.47■□□□□ 0.71
PTPN6-209ENST00000537533 C3P01024 1663 aa19.46■□□□□ 0.71
PTPN6-209ENST00000537533 MROH2AA6NES4 1674 aa19.46■□□□□ 0.71
PTPN6-209ENST00000537533 LMTK3Q96Q04 1460 aa19.45■□□□□ 0.7
PTPN6-209ENST00000537533 CROCC2H7BZ55 1655 aa19.43■□□□□ 0.7
PTPN6-209ENST00000537533 PPP6R1Q9UPN7 881 aa19.43■□□□□ 0.7
PTPN6-209ENST00000537533 CEBPAP49715 358 aaPredicted RBP19.42■□□□□ 0.7
PTPN6-209ENST00000537533 ESF1Q9H501 851 aaKnown RBP19.42■□□□□ 0.7
PTPN6-209ENST00000537533 SHANK2Q9UPX8 1470 aa19.41■□□□□ 0.7
PTPN6-209ENST00000537533 DNMT1P26358 1616 aaKnown RBP19.41■□□□□ 0.7
PTPN6-209ENST00000537533 PREX1Q8TCU6 1659 aa19.41■□□□□ 0.7
PTPN6-209ENST00000537533 PLPPR3Q6T4P5 718 aa19.41■□□□□ 0.7
PTPN6-209ENST00000537533 ABCC5O15440 1437 aa19.41■□□□□ 0.7
PTPN6-209ENST00000537533 CLTCQ00610 1675 aaKnown RBP19.4■□□□□ 0.7
PTPN6-209ENST00000537533 GGT6Q6P531 493 aa19.39■□□□□ 0.69
PTPN6-209ENST00000537533 DAPK1P53355 1430 aa19.38■□□□□ 0.69
PTPN6-209ENST00000537533 FAM135AQ9P2D6 1515 aa19.37■□□□□ 0.69
PTPN6-209ENST00000537533 ZMYM3Q14202 1370 aa19.37■□□□□ 0.69
PTPN6-209ENST00000537533 EIF2AK4Q9P2K8 1649 aaKnown RBP19.36■□□□□ 0.69
PTPN6-209ENST00000537533 KIF3BO15066 747 aa19.36■□□□□ 0.69
PTPN6-209ENST00000537533 DUOX2Q9NRD8 1548 aa19.35■□□□□ 0.69
PTPN6-209ENST00000537533 RNF17Q9BXT8 1623 aaKnown RBP19.34■□□□□ 0.69
PTPN6-209ENST00000537533 NPATQ14207 1427 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms