RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 ARHGAP5Q13017 1502 aa37.31■■■■□ 3.56
HMGA2-208ENST00000537429 MIA2Q96PC5 1412 aa37.31■■■■□ 3.56
HMGA2-208ENST00000537429 PPRC1Q5VV67 1664 aaKnown RBP37.3■■■■□ 3.56
HMGA2-208ENST00000537429 TSPOAP1O95153 1857 aa37.3■■■■□ 3.56
HMGA2-208ENST00000537429 FGD6Q6ZV73 1430 aa37.28■■■■□ 3.56
HMGA2-208ENST00000537429 EFCAB2Q5VUJ9 269 aa37.27■■■■□ 3.56
HMGA2-208ENST00000537429 FANCAO15360 1455 aa37.26■■■■□ 3.56
HMGA2-208ENST00000537429 TEX14Q8IWB6 1497 aa37.22■■■■□ 3.55
HMGA2-208ENST00000537429 CFAP74Q9C0B2 1584 aa37.2■■■■□ 3.55
HMGA2-208ENST00000537429 ZNF777Q9ULD5 760 aaPredicted RBP37.2■■■■□ 3.55
HMGA2-208ENST00000537429 NEO1Q92859 1461 aa37.19■■■■□ 3.54
HMGA2-208ENST00000537429 RRBP1Q9P2E9 1410 aaKnown RBP37.19■■■■□ 3.54
HMGA2-208ENST00000537429 SAMD9LQ8IVG5 1584 aa37.18■■■■□ 3.54
HMGA2-208ENST00000537429 PTPN23Q9H3S7 1636 aa37.18■■■■□ 3.54
HMGA2-208ENST00000537429 ZNF644Q9H582 1327 aaPredicted RBP37.18■■■■□ 3.54
HMGA2-208ENST00000537429 TCOF1Q13428 1488 aaKnown RBP37.15■■■■□ 3.54
HMGA2-208ENST00000537429 AKNAQ7Z591 1439 aa37.15■■■■□ 3.54
HMGA2-208ENST00000537429 CAMSAP2Q08AD1 1489 aa37.14■■■■□ 3.54
HMGA2-208ENST00000537429 ABCC1P33527 1531 aa37.09■■■■□ 3.53
HMGA2-208ENST00000537429 PLEKHH2Q8IVE3 1493 aa37.09■■■■□ 3.53
HMGA2-208ENST00000537429 KIAA1107Q9UPP5 1409 aa37.08■■■■□ 3.53
HMGA2-208ENST00000537429 ADGRL1O94910 1474 aa37.07■■■■□ 3.53
HMGA2-208ENST00000537429 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.07■■■■□ 3.53
HMGA2-208ENST00000537429 FAM50AQ14320 339 aaKnown RBP37.05■■■■□ 3.52
HMGA2-208ENST00000537429 ARHGEF12Q9NZN5 1544 aa37.04■■■■□ 3.52
HMGA2-208ENST00000537429 SCAPERQ9BY12 1400 aa37.03■■■■□ 3.52
HMGA2-208ENST00000537429 SYCP2Q9BX26 1530 aa37.03■■■■□ 3.52
HMGA2-208ENST00000537429 HNRNPMP52272 730 aaKnown RBP eCLIP37.02■■■■□ 3.522e-8■■□□□ 11.6
HMGA2-208ENST00000537429 MBD5Q9P267 1494 aa37.02■■■■□ 3.52
HMGA2-208ENST00000537429 ARHGEF5Q12774 1597 aa36.95■■■■□ 3.51
HMGA2-208ENST00000537429 TRAPPC8Q9Y2L5 1435 aa36.94■■■■□ 3.5
HMGA2-208ENST00000537429 RSPH4AQ5TD94 716 aa36.94■■■■□ 3.5
HMGA2-208ENST00000537429 DENND4BO75064 1496 aaPredicted RBP36.94■■■■□ 3.5
HMGA2-208ENST00000537429 COL17A1Q9UMD9 1497 aaPredicted RBP36.92■■■■□ 3.5
HMGA2-208ENST00000537429 DNMT1P26358 1616 aaKnown RBP36.91■■■■□ 3.5
HMGA2-208ENST00000537429 POGZQ7Z3K3 1410 aa36.9■■■■□ 3.5
HMGA2-208ENST00000537429 CCDC141Q6ZP82 1450 aa36.89■■■■□ 3.5
HMGA2-208ENST00000537429 ABCC5O15440 1437 aa36.89■■■■□ 3.5
HMGA2-208ENST00000537429 ZNF518AQ6AHZ1 1483 aa36.88■■■■□ 3.49
HMGA2-208ENST00000537429 DAPK1P53355 1430 aa36.88■■■■□ 3.49
HMGA2-208ENST00000537429 AFAP1Q8N556 730 aa36.88■■■■□ 3.49
HMGA2-208ENST00000537429 RAPGEF3O95398 923 aa36.87■■■■□ 3.49
HMGA2-208ENST00000537429 RICTORQ6R327 1708 aa36.87■■■■□ 3.49
HMGA2-208ENST00000537429 TRIM26Q12899 539 aaPredicted RBP36.86■■■■□ 3.49
HMGA2-208ENST00000537429 FRMPD1Q5SYB0 1578 aa36.83■■■■□ 3.49
HMGA2-208ENST00000537429 KDM6BO15054 1643 aa36.82■■■■□ 3.48
HMGA2-208ENST00000537429 KDM5CP41229 1560 aa36.81■■■■□ 3.48
HMGA2-208ENST00000537429 CROCC2H7BZ55 1655 aa36.81■■■■□ 3.48
HMGA2-208ENST00000537429 ITGAEP38570 1179 aa36.8■■■■□ 3.48
HMGA2-208ENST00000537429 PTPRKQ15262 1439 aa36.8■■■■□ 3.48
HMGA2-208ENST00000537429 TSPY4P0CV99 314 aa36.8■■■■□ 3.48
HMGA2-208ENST00000537429 TSPY10P0CW01 314 aa36.8■■■■□ 3.48
HMGA2-208ENST00000537429 SHANK2Q9UPX8 1470 aa36.77■■■■□ 3.48
HMGA2-208ENST00000537429 MAST1Q9Y2H9 1570 aa36.74■■■■□ 3.47
HMGA2-208ENST00000537429 SPAG9O60271 1321 aaKnown RBP36.74■■■■□ 3.47
HMGA2-208ENST00000537429 C9orf84Q5VXU9 1444 aa36.74■■■■□ 3.47
HMGA2-208ENST00000537429 ZMYM4Q5VZL5 1548 aa36.73■■■■□ 3.47
HMGA2-208ENST00000537429 MLH3Q9UHC1 1453 aa36.72■■■■□ 3.47
HMGA2-208ENST00000537429 RTEL1-TNFRSF6BF6WH68 1400 aa36.71■■■■□ 3.47
HMGA2-208ENST00000537429 CHIC2Q9UKJ5 165 aa36.69■■■■□ 3.46
HMGA2-208ENST00000537429 MYT1LQ9UL68 1186 aa36.69■■■■□ 3.46
HMGA2-208ENST00000537429 HECW2Q9P2P5 1572 aa36.69■■■■□ 3.46
HMGA2-208ENST00000537429 INO80Q9ULG1 1556 aaPredicted RBP36.69■■■■□ 3.46
HMGA2-208ENST00000537429 ZFYVE16Q7Z3T8 1539 aa36.68■■■■□ 3.46
HMGA2-208ENST00000537429 ATP7AQ04656 1500 aa36.67■■■■□ 3.46
HMGA2-208ENST00000537429 KIDINS220Q9ULH0 1771 aa36.66■■■■□ 3.46
HMGA2-208ENST00000537429 ADGRL2O95490 1459 aa36.66■■■■□ 3.46
HMGA2-208ENST00000537429 MAGI2Q86UL8 1455 aa36.65■■■■□ 3.46
HMGA2-208ENST00000537429 ADGBQ8N7X0 1667 aa36.63■■■■□ 3.45
HMGA2-208ENST00000537429 ROCK1Q13464 1354 aa36.62■■■■□ 3.45
HMGA2-208ENST00000537429 NCOA1Q15788 1441 aa36.62■■■■□ 3.45
HMGA2-208ENST00000537429 ANKRD30AQ9BXX3 1397 aa36.6■■■■□ 3.45
HMGA2-208ENST00000537429 PLXNC1O60486 1568 aa36.58■■■■□ 3.45
HMGA2-208ENST00000537429 YEATS2Q9ULM3 1422 aa36.57■■■■□ 3.45
HMGA2-208ENST00000537429 ABCA6Q8N139 1617 aa36.54■■■■□ 3.44
HMGA2-208ENST00000537429 RRP7BPQ9NSQ0 103 aa36.54■■■■□ 3.44
HMGA2-208ENST00000537429 DIP2CQ9Y2E4 1556 aa36.51■■■■□ 3.44
HMGA2-208ENST00000537429 KIF15Q9NS87 1388 aa36.51■■■■□ 3.43
HMGA2-208ENST00000537429 ARHGEF40Q8TER5 1519 aa36.49■■■■□ 3.43
HMGA2-208ENST00000537429 PCGF6Q9BYE7 350 aa36.49■■■■□ 3.43
HMGA2-208ENST00000537429 HFM1A2PYH4 1435 aa36.48■■■■□ 3.43
HMGA2-208ENST00000537429 NAIPQ13075 1403 aa36.45■■■■□ 3.43
HMGA2-208ENST00000537429 DUOX2Q9NRD8 1548 aa36.45■■■■□ 3.42
HMGA2-208ENST00000537429 ATP10AO60312 1499 aa36.45■■■■□ 3.42
HMGA2-208ENST00000537429 A2MP01023 1474 aa36.42■■■■□ 3.42
HMGA2-208ENST00000537429 DHX29Q7Z478 1369 aaKnown RBP36.42■■■■□ 3.42
HMGA2-208ENST00000537429 GCC2Q8IWJ2 1684 aa36.42■■■■□ 3.42
HMGA2-208ENST00000537429 REREQ9P2R6 1566 aa36.39■■■■□ 3.42
HMGA2-208ENST00000537429 ANKRD50Q9ULJ7 1429 aa36.37■■■■□ 3.41
HMGA2-208ENST00000537429 ERBINQ96RT1 1412 aa36.35■■■■□ 3.41
HMGA2-208ENST00000537429 SETD5Q9C0A6 1442 aa36.35■■■■□ 3.41
HMGA2-208ENST00000537429 SIGLEC1Q9BZZ2 1709 aa36.28■■■■□ 3.4
HMGA2-208ENST00000537429 EIF2AK4Q9P2K8 1649 aaKnown RBP36.28■■■■□ 3.4
HMGA2-208ENST00000537429 AGLP35573 1532 aa36.26■■■■□ 3.4
HMGA2-208ENST00000537429 RAB3GAP2Q9H2M9 1393 aa36.24■■■■□ 3.39
HMGA2-208ENST00000537429 BCORL1Q5H9F3 1711 aa36.24■■■■□ 3.39
HMGA2-208ENST00000537429 KIF3BO15066 747 aa36.23■■■■□ 3.39
HMGA2-208ENST00000537429 ARID4BQ4LE39 1312 aaPredicted RBP36.2■■■■□ 3.38
HMGA2-208ENST00000537429 HRCP23327 699 aa36.18■■■■□ 3.38
HMGA2-208ENST00000537429 DEPDC5O75140 1603 aa36.14■■■■□ 3.38
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