RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-215ENST00000537296 AKNAQ7Z591 1439 aa17.38■□□□□ 0.37
LDHA-215ENST00000537296 CFAP74Q9C0B2 1584 aa17.38■□□□□ 0.37
LDHA-215ENST00000537296 PHLDB1Q86UU1 1377 aa17.37■□□□□ 0.37
LDHA-215ENST00000537296 RICTORQ6R327 1708 aa17.36■□□□□ 0.37
LDHA-215ENST00000537296 CDC42BPBQ9Y5S2 1711 aa17.36■□□□□ 0.37
LDHA-215ENST00000537296 KCNA4P22459 653 aa17.36■□□□□ 0.37
LDHA-215ENST00000537296 CDC42BPAQ5VT25 1732 aa17.35■□□□□ 0.37
LDHA-215ENST00000537296 PREX2Q70Z35 1606 aa17.33■□□□□ 0.37
LDHA-215ENST00000537296 ARHGAP5Q13017 1502 aa17.33■□□□□ 0.36
LDHA-215ENST00000537296 KDM4FA0A1W2PPD8 638 aa17.32■□□□□ 0.36
LDHA-215ENST00000537296 DENND4BO75064 1496 aaPredicted RBP17.32■□□□□ 0.36
LDHA-215ENST00000537296 VPS8Q8N3P4 1428 aa17.32■□□□□ 0.36
LDHA-215ENST00000537296 ADGRL1O94910 1474 aa17.32■□□□□ 0.36
LDHA-215ENST00000537296 SCAPERQ9BY12 1400 aa17.3■□□□□ 0.36
LDHA-215ENST00000537296 EFCAB2Q5VUJ9 269 aa17.29■□□□□ 0.36
LDHA-215ENST00000537296 MTUS2Q5JR59 1369 aa17.28■□□□□ 0.36
LDHA-215ENST00000537296 TIAM1Q13009 1591 aa17.28■□□□□ 0.36
LDHA-215ENST00000537296 EHBP1L1Q8N3D4 1523 aa17.27■□□□□ 0.35
LDHA-215ENST00000537296 POGZQ7Z3K3 1410 aa17.27■□□□□ 0.35
LDHA-215ENST00000537296 GPATCH8Q9UKJ3 1502 aaKnown RBP17.26■□□□□ 0.35
LDHA-215ENST00000537296 ZMYM4Q5VZL5 1548 aa17.25■□□□□ 0.35
LDHA-215ENST00000537296 ARHGEF40Q8TER5 1519 aa17.24■□□□□ 0.35
LDHA-215ENST00000537296 ARHGEF12Q9NZN5 1544 aa17.24■□□□□ 0.35
LDHA-215ENST00000537296 YEATS2Q9ULM3 1422 aa17.24■□□□□ 0.35
LDHA-215ENST00000537296 SIGLEC1Q9BZZ2 1709 aa17.23■□□□□ 0.35
LDHA-215ENST00000537296 SAMD9LQ8IVG5 1584 aa17.23■□□□□ 0.35
LDHA-215ENST00000537296 ABCC1P33527 1531 aa17.23■□□□□ 0.35
LDHA-215ENST00000537296 ITSN2Q9NZM3 1697 aa17.23■□□□□ 0.35
LDHA-215ENST00000537296 ZFYVE16Q7Z3T8 1539 aa17.21■□□□□ 0.35
LDHA-215ENST00000537296 NCBP3Q53F19 620 aaKnown RBP17.21■□□□□ 0.34
LDHA-215ENST00000537296 CCNB3Q8WWL7 1395 aa17.2■□□□□ 0.34
LDHA-215ENST00000537296 SUPT6HQ7KZ85 1726 aaKnown RBP17.2■□□□□ 0.34
LDHA-215ENST00000537296 AFAP1Q8N556 730 aa17.2■□□□□ 0.34
LDHA-215ENST00000537296 ZNF777Q9ULD5 760 aaPredicted RBP17.2■□□□□ 0.34
LDHA-215ENST00000537296 KDM5CP41229 1560 aa17.19■□□□□ 0.34
LDHA-215ENST00000537296 TRAPPC8Q9Y2L5 1435 aa17.19■□□□□ 0.34
LDHA-215ENST00000537296 LRRC9Q6ZRR7 1453 aa17.19■□□□□ 0.34
LDHA-215ENST00000537296 KANK4Q5T7N3 995 aaPredicted RBP17.18■□□□□ 0.34
LDHA-215ENST00000537296 NCOA2Q15596 1464 aa17.18■□□□□ 0.34
LDHA-215ENST00000537296 ZNF518AQ6AHZ1 1483 aa17.18■□□□□ 0.34
LDHA-215ENST00000537296 SYCP2Q9BX26 1530 aa17.17■□□□□ 0.34
LDHA-215ENST00000537296 MAPK8IP2Q13387 824 aaPredicted RBP17.16■□□□□ 0.34
LDHA-215ENST00000537296 MAGI2Q86UL8 1455 aa17.16■□□□□ 0.34
LDHA-215ENST00000537296 CFDP1Q9UEE9 299 aaPredicted RBP17.16■□□□□ 0.34
LDHA-215ENST00000537296 MAP3K1Q13233 1512 aa17.15■□□□□ 0.34
LDHA-215ENST00000537296 HECW2Q9P2P5 1572 aa17.15■□□□□ 0.34
LDHA-215ENST00000537296 BCORL1Q5H9F3 1711 aa17.15■□□□□ 0.34
LDHA-215ENST00000537296 ZNF644Q9H582 1327 aaPredicted RBP17.14■□□□□ 0.34
LDHA-215ENST00000537296 ADAMTSL3P82987 1691 aa17.14■□□□□ 0.33
LDHA-215ENST00000537296 HNRNPMP52272 730 aaKnown RBP eCLIP17.13■□□□□ 0.33
LDHA-215ENST00000537296 ABCA6Q8N139 1617 aa17.13■□□□□ 0.33
LDHA-215ENST00000537296 KIDINS220Q9ULH0 1771 aa17.12■□□□□ 0.33
LDHA-215ENST00000537296 ARID4BQ4LE39 1312 aaPredicted RBP17.12■□□□□ 0.33
LDHA-215ENST00000537296 DIP2CQ9Y2E4 1556 aa17.12■□□□□ 0.33
LDHA-215ENST00000537296 ATP10AO60312 1499 aa17.1■□□□□ 0.33
LDHA-215ENST00000537296 MLH3Q9UHC1 1453 aa17.1■□□□□ 0.33
LDHA-215ENST00000537296 MADDQ8WXG6 1647 aa17.1■□□□□ 0.33
LDHA-215ENST00000537296 KIAA1107Q9UPP5 1409 aa17.09■□□□□ 0.33
LDHA-215ENST00000537296 CNKSR2Q8WXI2 1034 aa17.08■□□□□ 0.32
LDHA-215ENST00000537296 MYT1LQ9UL68 1186 aa17.08■□□□□ 0.32
LDHA-215ENST00000537296 C9orf84Q5VXU9 1444 aa17.08■□□□□ 0.32
LDHA-215ENST00000537296 PLEKHH2Q8IVE3 1493 aa17.07■□□□□ 0.32
LDHA-215ENST00000537296 CAMSAP2Q08AD1 1489 aa17.06■□□□□ 0.32
LDHA-215ENST00000537296 MBD5Q9P267 1494 aa17.06■□□□□ 0.32
LDHA-215ENST00000537296 INO80Q9ULG1 1556 aaPredicted RBP17.06■□□□□ 0.32
LDHA-215ENST00000537296 RIMS1Q86UR5 1692 aaKnown RBP17.05■□□□□ 0.32
LDHA-215ENST00000537296 MLECQ14165 292 aa17.05■□□□□ 0.32
LDHA-215ENST00000537296 ATP7AQ04656 1500 aa17.03■□□□□ 0.32
LDHA-215ENST00000537296 SPAG9O60271 1321 aaKnown RBP17.03■□□□□ 0.32
LDHA-215ENST00000537296 APLP2Q06481 763 aa17.03■□□□□ 0.32
LDHA-215ENST00000537296 REREQ9P2R6 1566 aa17.03■□□□□ 0.32
LDHA-215ENST00000537296 PTPRMP28827 1452 aa17.03■□□□□ 0.32
LDHA-215ENST00000537296 FER1L4A9Z1Z3 1794 aa17.02■□□□□ 0.32
LDHA-215ENST00000537296 MYOM3Q5VTT5 1437 aa17.01■□□□□ 0.31
LDHA-215ENST00000537296 CCDC141Q6ZP82 1450 aa16.98■□□□□ 0.31
LDHA-215ENST00000537296 ARHGEF5Q12774 1597 aa16.97■□□□□ 0.31
LDHA-215ENST00000537296 ADGBQ8N7X0 1667 aa16.97■□□□□ 0.31
LDHA-215ENST00000537296 AGLP35573 1532 aa16.96■□□□□ 0.31
LDHA-215ENST00000537296 MIA2Q96PC5 1412 aa16.96■□□□□ 0.31
LDHA-215ENST00000537296 PLXNC1O60486 1568 aa16.95■□□□□ 0.3
LDHA-215ENST00000537296 PTPN23Q9H3S7 1636 aa16.94■□□□□ 0.3
LDHA-215ENST00000537296 A2MP01023 1474 aa16.94■□□□□ 0.3
LDHA-215ENST00000537296 NPM3O75607 178 aaKnown RBP16.92■□□□□ 0.3
LDHA-215ENST00000537296 RTEL1-TNFRSF6BF6WH68 1400 aa16.92■□□□□ 0.3
LDHA-215ENST00000537296 FGD6Q6ZV73 1430 aa16.91■□□□□ 0.3
LDHA-215ENST00000537296 PPARGC1BQ86YN6 1023 aaKnown RBP16.91■□□□□ 0.3
LDHA-215ENST00000537296 CROCC2H7BZ55 1655 aa16.89■□□□□ 0.29
LDHA-215ENST00000537296 MAST1Q9Y2H9 1570 aa16.89■□□□□ 0.29
LDHA-215ENST00000537296 CEBPAP49715 358 aaPredicted RBP16.88■□□□□ 0.29
LDHA-215ENST00000537296 RSPH4AQ5TD94 716 aa16.88■□□□□ 0.29
LDHA-215ENST00000537296 DMRT2Q9Y5R5 561 aa16.88■□□□□ 0.29
LDHA-215ENST00000537296 TCOF1Q13428 1488 aaKnown RBP16.88■□□□□ 0.29
LDHA-215ENST00000537296 C3P01024 1663 aa16.87■□□□□ 0.29
LDHA-215ENST00000537296 TSPY4P0CV99 314 aa16.86■□□□□ 0.29
LDHA-215ENST00000537296 TSPY10P0CW01 314 aa16.86■□□□□ 0.29
LDHA-215ENST00000537296 DHX29Q7Z478 1369 aaKnown RBP16.85■□□□□ 0.29
LDHA-215ENST00000537296 ABCC5O15440 1437 aa16.85■□□□□ 0.29
LDHA-215ENST00000537296 DNMT1P26358 1616 aaKnown RBP16.85■□□□□ 0.29
LDHA-215ENST00000537296 CLTCQ00610 1675 aaKnown RBP16.85■□□□□ 0.29
LDHA-215ENST00000537296 LMTK3Q96Q04 1460 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms