RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 CDC42BPBQ9Y5S2 1711 aa35.09■■■■□ 3.21
VPS37C-202ENST00000535818 FRMPD1Q5SYB0 1578 aa35.08■■■■□ 3.21
VPS37C-202ENST00000535818 CDC42BPAQ5VT25 1732 aa35.07■■■■□ 3.2
VPS37C-202ENST00000535818 SCAPERQ9BY12 1400 aa35.05■■■■□ 3.2
VPS37C-202ENST00000535818 RICTORQ6R327 1708 aa35.04■■■■□ 3.2
VPS37C-202ENST00000535818 CCNB3Q8WWL7 1395 aa35.02■■■■□ 3.2
VPS37C-202ENST00000535818 MAP3K1Q13233 1512 aa34.99■■■■□ 3.19
VPS37C-202ENST00000535818 GPATCH8Q9UKJ3 1502 aaKnown RBP34.99■■■■□ 3.19
VPS37C-202ENST00000535818 SUPT6HQ7KZ85 1726 aaKnown RBP34.98■■■■□ 3.19
VPS37C-202ENST00000535818 APLP2Q06481 763 aa34.98■■■■□ 3.19
VPS37C-202ENST00000535818 POGZQ7Z3K3 1410 aa34.98■■■■□ 3.19
VPS37C-202ENST00000535818 LRRC9Q6ZRR7 1453 aa34.96■■■■□ 3.19
VPS37C-202ENST00000535818 ZNF777Q9ULD5 760 aaPredicted RBP34.93■■■■□ 3.18
VPS37C-202ENST00000535818 ITSN2Q9NZM3 1697 aa34.92■■■■□ 3.18
VPS37C-202ENST00000535818 ZMYM4Q5VZL5 1548 aa34.92■■■■□ 3.18
VPS37C-202ENST00000535818 ABCC1P33527 1531 aa34.91■■■■□ 3.18
VPS37C-202ENST00000535818 NCOA2Q15596 1464 aa34.91■■■■□ 3.18
VPS37C-202ENST00000535818 CFDP1Q9UEE9 299 aaPredicted RBP34.91■■■■□ 3.18
VPS37C-202ENST00000535818 ZNF518AQ6AHZ1 1483 aa34.89■■■■□ 3.18
VPS37C-202ENST00000535818 SAMD9LQ8IVG5 1584 aa34.87■■■■□ 3.17
VPS37C-202ENST00000535818 ARHGEF40Q8TER5 1519 aa34.87■■■■□ 3.17
VPS37C-202ENST00000535818 KANK4Q5T7N3 995 aaPredicted RBP34.86■■■■□ 3.17
VPS37C-202ENST00000535818 ZFYVE16Q7Z3T8 1539 aa34.86■■■■□ 3.17
VPS37C-202ENST00000535818 AEBP2Q6ZN18 517 aaPredicted RBP34.85■■■■□ 3.17
VPS37C-202ENST00000535818 MAGI2Q86UL8 1455 aa34.84■■■■□ 3.17
VPS37C-202ENST00000535818 ARHGEF12Q9NZN5 1544 aa34.82■■■■□ 3.16
VPS37C-202ENST00000535818 KDM5CP41229 1560 aa34.8■■■■□ 3.16
VPS37C-202ENST00000535818 PLEKHH2Q8IVE3 1493 aa34.8■■■■□ 3.16
VPS37C-202ENST00000535818 AFAP1Q8N556 730 aa34.8■■■■□ 3.16
VPS37C-202ENST00000535818 SYCP2Q9BX26 1530 aa34.8■■■■□ 3.16
VPS37C-202ENST00000535818 MYT1LQ9UL68 1186 aa34.79■■■■□ 3.16
VPS37C-202ENST00000535818 YEATS2Q9ULM3 1422 aa34.79■■■■□ 3.16
VPS37C-202ENST00000535818 TRAPPC8Q9Y2L5 1435 aa34.79■■■■□ 3.16
VPS37C-202ENST00000535818 KDM4FA0A1W2PPD8 638 aa34.78■■■■□ 3.16
VPS37C-202ENST00000535818 HECW2Q9P2P5 1572 aa34.75■■■■□ 3.15
VPS37C-202ENST00000535818 KIAA1107Q9UPP5 1409 aa34.73■■■■□ 3.15
VPS37C-202ENST00000535818 HNRNPMP52272 730 aaKnown RBP eCLIP34.73■■■■□ 3.154e-7■■■■□ 24.4
VPS37C-202ENST00000535818 ARID4BQ4LE39 1312 aaPredicted RBP34.72■■■■□ 3.15
VPS37C-202ENST00000535818 ZNF644Q9H582 1327 aaPredicted RBP34.69■■■■□ 3.14
VPS37C-202ENST00000535818 MLH3Q9UHC1 1453 aa34.67■■■■□ 3.14
VPS37C-202ENST00000535818 ATP10AO60312 1499 aa34.65■■■■□ 3.14
VPS37C-202ENST00000535818 CAMSAP2Q08AD1 1489 aa34.65■■■■□ 3.14
VPS37C-202ENST00000535818 MYOM3Q5VTT5 1437 aa34.64■■■■□ 3.14
VPS37C-202ENST00000535818 C9orf84Q5VXU9 1444 aa34.64■■■■□ 3.14
VPS37C-202ENST00000535818 DIP2CQ9Y2E4 1556 aa34.62■■■■□ 3.13
VPS37C-202ENST00000535818 SPAG9O60271 1321 aaKnown RBP34.61■■■■□ 3.13
VPS37C-202ENST00000535818 ABCA6Q8N139 1617 aa34.6■■■■□ 3.13
VPS37C-202ENST00000535818 KIDINS220Q9ULH0 1771 aa34.59■■■■□ 3.13
VPS37C-202ENST00000535818 BCORL1Q5H9F3 1711 aa34.58■■■■□ 3.13
VPS37C-202ENST00000535818 MBD5Q9P267 1494 aa34.58■■■■□ 3.13
VPS37C-202ENST00000535818 MIA2Q96PC5 1412 aa34.56■■■■□ 3.12
VPS37C-202ENST00000535818 SIGLEC1Q9BZZ2 1709 aa34.56■■■■□ 3.12
VPS37C-202ENST00000535818 ATP7AQ04656 1500 aa34.55■■■■□ 3.12
VPS37C-202ENST00000535818 INO80Q9ULG1 1556 aaPredicted RBP34.53■■■■□ 3.12
VPS37C-202ENST00000535818 CCDC141Q6ZP82 1450 aa34.52■■■■□ 3.12
VPS37C-202ENST00000535818 ADAMTSL3P82987 1691 aa34.52■■■■□ 3.12
VPS37C-202ENST00000535818 REREQ9P2R6 1566 aa34.5■■■■□ 3.11
VPS37C-202ENST00000535818 RSPH4AQ5TD94 716 aa34.49■■■■□ 3.11
VPS37C-202ENST00000535818 ARHGEF5Q12774 1597 aa34.48■■■■□ 3.11
VPS37C-202ENST00000535818 MLECQ14165 292 aa34.47■■■■□ 3.11
VPS37C-202ENST00000535818 MADDQ8WXG6 1647 aa34.46■■■■□ 3.11
VPS37C-202ENST00000535818 PTPN23Q9H3S7 1636 aa34.44■■■■□ 3.1
VPS37C-202ENST00000535818 FGD6Q6ZV73 1430 aa34.43■■■■□ 3.1
VPS37C-202ENST00000535818 RTEL1-TNFRSF6BF6WH68 1400 aa34.42■■■■□ 3.1
VPS37C-202ENST00000535818 TSPY4P0CV99 314 aa34.39■■■■□ 3.1
VPS37C-202ENST00000535818 TSPY10P0CW01 314 aa34.39■■■■□ 3.1
VPS37C-202ENST00000535818 AGLP35573 1532 aa34.39■■■■□ 3.1
VPS37C-202ENST00000535818 RIMS1Q86UR5 1692 aaKnown RBP34.38■■■■□ 3.09
VPS37C-202ENST00000535818 ADGBQ8N7X0 1667 aa34.37■■■■□ 3.09
VPS37C-202ENST00000535818 A2MP01023 1474 aa34.36■■■■□ 3.09
VPS37C-202ENST00000535818 PTPRMP28827 1452 aa34.35■■■■□ 3.09
VPS37C-202ENST00000535818 FER1L4A9Z1Z3 1794 aa34.35■■■■□ 3.09
VPS37C-202ENST00000535818 TCOF1Q13428 1488 aaKnown RBP34.33■■■■□ 3.09
VPS37C-202ENST00000535818 PPARGC1BQ86YN6 1023 aaKnown RBP34.33■■■■□ 3.09
VPS37C-202ENST00000535818 PLXNC1O60486 1568 aa34.31■■■■□ 3.08
VPS37C-202ENST00000535818 MAST1Q9Y2H9 1570 aa34.29■■■■□ 3.08
VPS37C-202ENST00000535818 CROCC2H7BZ55 1655 aa34.25■■■■□ 3.07
VPS37C-202ENST00000535818 DNMT1P26358 1616 aaKnown RBP34.24■■■■□ 3.07
VPS37C-202ENST00000535818 FAM50AQ14320 339 aaKnown RBP34.23■■■■□ 3.07
VPS37C-202ENST00000535818 DHX29Q7Z478 1369 aaKnown RBP34.23■■■■□ 3.07
VPS37C-202ENST00000535818 ABCC5O15440 1437 aa34.22■■■■□ 3.07
VPS37C-202ENST00000535818 DAPK1P53355 1430 aa34.22■■■■□ 3.07
VPS37C-202ENST00000535818 PLPPR3Q6T4P5 718 aa34.22■■■■□ 3.07
VPS37C-202ENST00000535818 ESF1Q9H501 851 aaKnown RBP34.22■■■■□ 3.07
VPS37C-202ENST00000535818 SHANK2Q9UPX8 1470 aa34.21■■■■□ 3.07
VPS37C-202ENST00000535818 GGT6Q6P531 493 aa34.15■■■■□ 3.06
VPS37C-202ENST00000535818 KIF3BO15066 747 aa34.11■■■■□ 3.05
VPS37C-202ENST00000535818 CNTLNQ9NXG0 1405 aa34.11■■■■□ 3.05
VPS37C-202ENST00000535818 CHIC2Q9UKJ5 165 aa34.08■■■■□ 3.05
VPS37C-202ENST00000535818 KIF15Q9NS87 1388 aa34.07■■■■□ 3.04
VPS37C-202ENST00000535818 DUOX2Q9NRD8 1548 aa34.06■■■■□ 3.04
VPS37C-202ENST00000535818 CEBPAP49715 358 aaPredicted RBP34.05■■■■□ 3.04
VPS37C-202ENST00000535818 ANKRD30AQ9BXX3 1397 aa34.04■■■■□ 3.04
VPS37C-202ENST00000535818 RRP7BPQ9NSQ0 103 aa34.04■■■■□ 3.04
VPS37C-202ENST00000535818 CLTCQ00610 1675 aaKnown RBP34.03■■■■□ 3.04
VPS37C-202ENST00000535818 EIF2AK4Q9P2K8 1649 aaKnown RBP34.03■■■■□ 3.04
VPS37C-202ENST00000535818 C3P01024 1663 aa34.03■■■■□ 3.04
VPS37C-202ENST00000535818 PPP6R1Q9UPN7 881 aa34.02■■■■□ 3.04
VPS37C-202ENST00000535818 MROH2AA6NES4 1674 aa34.02■■■■□ 3.04
VPS37C-202ENST00000535818 ADGRL2O95490 1459 aa33.97■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms