RNA–Protein interactions for RNA: ENST00000535515.5

C12orf56-202, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 3

Gene C12orf56, Length 489 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-202ENST00000535515 HOXB1P14653 301 aaPredicted RBP11.82□□□□□ -0.52
C12orf56-202ENST00000535515 HS3ST6Q96QI5 342 aa11.8□□□□□ -0.52
C12orf56-202ENST00000535515 HS6ST3Q8IZP7 471 aa11.78□□□□□ -0.52
C12orf56-202ENST00000535515 POTEB3A0JP26 581 aa11.77□□□□□ -0.53
C12orf56-202ENST00000535515 POTEBQ6S5H4 581 aa11.77□□□□□ -0.53
C12orf56-202ENST00000535515 CHGAP10645 457 aaKnown RBP11.76□□□□□ -0.53
C12orf56-202ENST00000535515 ZSWIM6Q9HCJ5 1215 aa11.76□□□□□ -0.53
C12orf56-202ENST00000535515 PPP1R37O75864 691 aa11.73□□□□□ -0.53
C12orf56-202ENST00000535515 ERBB3P21860 1342 aa11.73□□□□□ -0.53
C12orf56-202ENST00000535515 C2orf72A6NCS6 295 aa11.72□□□□□ -0.53
C12orf56-202ENST00000535515 KIF3CO14782 793 aa11.71□□□□□ -0.53
C12orf56-202ENST00000535515 GPR153Q6NV75 609 aa11.71□□□□□ -0.53
C12orf56-202ENST00000535515 SPNS2Q8IVW8 549 aa11.68□□□□□ -0.54
C12orf56-202ENST00000535515 TMC2Q8TDI7 906 aa11.68□□□□□ -0.54
C12orf56-202ENST00000535515 ARSIQ5FYB1 569 aa11.67□□□□□ -0.54
C12orf56-202ENST00000535515 KRTAP3-3Q9BYR6 98 aa11.67□□□□□ -0.54
C12orf56-202ENST00000535515 KRTAP3-2Q9BYR7 98 aa11.67□□□□□ -0.54
C12orf56-202ENST00000535515 VARS2Q5ST30 1063 aaKnown RBP11.65□□□□□ -0.54
C12orf56-202ENST00000535515 DNAJC5Q9H3Z4 198 aa11.64□□□□□ -0.55
C12orf56-202ENST00000535515 MMRN1Q13201 1228 aa11.62□□□□□ -0.55
C12orf56-202ENST00000535515 NKX1-1Q15270 411 aaPredicted RBP11.61□□□□□ -0.55
C12orf56-202ENST00000535515 KHSRPQ92945 711 aaKnown RBP eCLIP11.61□□□□□ -0.55
C12orf56-202ENST00000535515 RYDENQ9NUL5 291 aaKnown RBP11.6□□□□□ -0.55
C12orf56-202ENST00000535515 SLC34A2O95436 690 aa11.59□□□□□ -0.55
C12orf56-202ENST00000535515 ZNF687Q8N1G0 1237 aa11.57□□□□□ -0.56
C12orf56-202ENST00000535515 ZNF316A6NFI3 1004 aaPredicted RBP11.56□□□□□ -0.56
C12orf56-202ENST00000535515 DCAF8L2P0C7V8 631 aa11.55□□□□□ -0.56
C12orf56-202ENST00000535515 PCDHGA4Q9Y5G9 962 aa11.55□□□□□ -0.56
C12orf56-202ENST00000535515 NUDT7P0C024 238 aa11.54□□□□□ -0.56
C12orf56-202ENST00000535515 GPHNQ9NQX3 736 aaPredicted RBP11.54□□□□□ -0.56
C12orf56-202ENST00000535515 FOXK1P85037 733 aa11.53□□□□□ -0.56
C12orf56-202ENST00000535515 PLPP6Q8IY26 295 aa11.51□□□□□ -0.57
C12orf56-202ENST00000535515 DSG2Q14126 1118 aa11.49□□□□□ -0.57
C12orf56-202ENST00000535515 LHX6Q9UPM6 363 aa11.48□□□□□ -0.57
C12orf56-202ENST00000535515 PTCD2Q8WV60 388 aaKnown RBP11.47□□□□□ -0.57
C12orf56-202ENST00000535515 GTPBP6O43824 516 aaPredicted RBP11.46□□□□□ -0.57
C12orf56-202ENST00000535515 TBC1D12O60347 775 aa11.42□□□□□ -0.58
C12orf56-202ENST00000535515 CRISPLD2Q9H0B8 497 aa11.42□□□□□ -0.58
C12orf56-202ENST00000535515 ANKRD13DQ6ZTN6 518 aa11.41□□□□□ -0.58
C12orf56-202ENST00000535515 KDM4FA0A1W2PPD8 638 aa11.4□□□□□ -0.58
C12orf56-202ENST00000535515 PDE4AP27815 886 aa11.4□□□□□ -0.58
C12orf56-202ENST00000535515 PSDA5PKW4 1024 aaPredicted RBP11.39□□□□□ -0.59
C12orf56-202ENST00000535515 PBX2P40425 430 aa11.39□□□□□ -0.59
C12orf56-202ENST00000535515 LSM11P83369 360 aaKnown RBP eCLIP11.38□□□□□ -0.59
C12orf56-202ENST00000535515 PPP1R15BQ5SWA1 713 aa11.37□□□□□ -0.59
C12orf56-202ENST00000535515 MYT1LQ9UL68 1186 aa11.37□□□□□ -0.59
C12orf56-202ENST00000535515 NCKAP5LQ9HCH0 1330 aa11.36□□□□□ -0.59
C12orf56-202ENST00000535515 RNF166Q96A37 237 aaPredicted RBP11.36□□□□□ -0.59
C12orf56-202ENST00000535515 PTGER2P43116 358 aa11.35□□□□□ -0.59
C12orf56-202ENST00000535515 POTEEQ6S8J3 1075 aa11.35□□□□□ -0.59
C12orf56-202ENST00000535515 AXIN2Q9Y2T1 843 aa11.35□□□□□ -0.59
C12orf56-202ENST00000535515 OXER1Q8TDS5 423 aa11.34□□□□□ -0.59
C12orf56-202ENST00000535515 UPF1Q92900 1129 aaKnown RBP eCLIP11.34□□□□□ -0.59
C12orf56-202ENST00000535515 LARP6Q9BRS8 491 aaKnown RBP11.33□□□□□ -0.6
C12orf56-202ENST00000535515 ARHGAP33O14559 1287 aa11.31□□□□□ -0.6
C12orf56-202ENST00000535515 PPP4R3BQ5MIZ7 849 aa11.3□□□□□ -0.6
C12orf56-202ENST00000535515 DDX27Q96GQ7 796 aaKnown RBP11.29□□□□□ -0.6
C12orf56-202ENST00000535515 AMER1Q5JTC6 1135 aaPredicted RBP11.27□□□□□ -0.61
C12orf56-202ENST00000535515 BBXQ8WY36 941 aaPredicted RBP11.26□□□□□ -0.61
C12orf56-202ENST00000535515 MFSD10Q14728 455 aa11.25□□□□□ -0.61
C12orf56-202ENST00000535515 PSEN2P49810 448 aa11.23□□□□□ -0.61
C12orf56-202ENST00000535515 CADPS2Q86UW7 1296 aa11.23□□□□□ -0.61
C12orf56-202ENST00000535515 ADGRD1Q6QNK2 874 aa11.22□□□□□ -0.61
C12orf56-202ENST00000535515 ZNF454Q8N9F8 522 aa11.22□□□□□ -0.61
C12orf56-202ENST00000535515 MAP3K9P80192 1104 aa11.21□□□□□ -0.61
C12orf56-202ENST00000535515 DMRTA1Q5VZB9 504 aa11.21□□□□□ -0.61
C12orf56-202ENST00000535515 KCNH8Q96L42 1107 aa11.21□□□□□ -0.61
C12orf56-202ENST00000535515 TK2O00142 265 aa11.2□□□□□ -0.62
C12orf56-202ENST00000535515 EVI5O60447 810 aa11.2□□□□□ -0.62
C12orf56-202ENST00000535515 ANO8Q9HCE9 1232 aaPredicted RBP11.2□□□□□ -0.62
C12orf56-202ENST00000535515 RTN4Q9NQC3 1192 aaKnown RBP11.19□□□□□ -0.62
C12orf56-202ENST00000535515 KCNK17Q96T54 332 aa11.18□□□□□ -0.62
C12orf56-202ENST00000535515 FOSBP53539 338 aa11.17□□□□□ -0.62
C12orf56-202ENST00000535515 EMILIN3Q9NT22 766 aa11.17□□□□□ -0.62
C12orf56-202ENST00000535515 SPRYD3Q8NCJ5 442 aa11.15□□□□□ -0.62
C12orf56-202ENST00000535515 BCL2L12Q9HB09 334 aa11.15□□□□□ -0.62
C12orf56-202ENST00000535515 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.15□□□□□ -0.62
C12orf56-202ENST00000535515 JPH4Q96JJ6 628 aa11.14□□□□□ -0.63
C12orf56-202ENST00000535515 HRO43593 1189 aa11.13□□□□□ -0.63
C12orf56-202ENST00000535515 STAC3Q96MF2 364 aa11.13□□□□□ -0.63
C12orf56-202ENST00000535515 PTPREP23469 700 aa11.11□□□□□ -0.63
C12orf56-202ENST00000535515 ZDHHC16Q969W1 377 aa11.11□□□□□ -0.63
C12orf56-202ENST00000535515 CAMK2BQ13554 666 aa11.09□□□□□ -0.63
C12orf56-202ENST00000535515 VPS9D1Q9Y2B5 631 aa11.09□□□□□ -0.63
C12orf56-202ENST00000535515 ADAM33Q9BZ11 813 aa11.08□□□□□ -0.64
C12orf56-202ENST00000535515 HCSTQ9UBK5 93 aa11.08□□□□□ -0.64
C12orf56-202ENST00000535515 SLC4A5Q9BY07 1137 aa11.07□□□□□ -0.64
C12orf56-202ENST00000535515 PAXIP1Q6ZW49 1069 aaPredicted RBP11.05□□□□□ -0.64
C12orf56-202ENST00000535515 PCDHGA10Q9Y5H3 936 aa11.05□□□□□ -0.64
C12orf56-202ENST00000535515 DPYSL4O14531 572 aa11.04□□□□□ -0.64
C12orf56-202ENST00000535515 CFAP44Q96MT7 982 aa11.04□□□□□ -0.64
C12orf56-202ENST00000535515 KCTD12Q96CX2 325 aaKnown RBP11.03□□□□□ -0.64
C12orf56-202ENST00000535515 ZBED2Q9BTP6 218 aa11.03□□□□□ -0.64
C12orf56-202ENST00000535515 PHF14O94880 888 aa11.02□□□□□ -0.65
C12orf56-202ENST00000535515 TYW1BQ6NUM6 668 aa11.01□□□□□ -0.65
C12orf56-202ENST00000535515 FBXW7Q969H0 707 aa11.01□□□□□ -0.65
C12orf56-202ENST00000535515 BHMG1C9JSJ3 638 aaPredicted RBP10.99□□□□□ -0.65
C12orf56-202ENST00000535515 PPP1R3GB7ZBB8 358 aa10.97□□□□□ -0.65
C12orf56-202ENST00000535515 EPAS1Q99814 870 aa10.97□□□□□ -0.65
C12orf56-202ENST00000535515 GOLGA8CPA6NN73 597 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms