RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 ADAMTSL3P82987 1691 aa13.81□□□□□ -0.2
SFSWAP-202ENST00000535202 BCORL1Q5H9F3 1711 aa13.81□□□□□ -0.2
SFSWAP-202ENST00000535202 POGZQ7Z3K3 1410 aa13.81□□□□□ -0.2
SFSWAP-202ENST00000535202 ZFYVE16Q7Z3T8 1539 aa13.8□□□□□ -0.2
SFSWAP-202ENST00000535202 EFCAB2Q5VUJ9 269 aa13.8□□□□□ -0.2
SFSWAP-202ENST00000535202 HECW2Q9P2P5 1572 aa13.79□□□□□ -0.2
SFSWAP-202ENST00000535202 CDC42BPBQ9Y5S2 1711 aa13.78□□□□□ -0.2
SFSWAP-202ENST00000535202 YEATS2Q9ULM3 1422 aa13.78□□□□□ -0.2
SFSWAP-202ENST00000535202 PREX2Q70Z35 1606 aa13.77□□□□□ -0.21
SFSWAP-202ENST00000535202 MAGI2Q86UL8 1455 aa13.77□□□□□ -0.21
SFSWAP-202ENST00000535202 MADDQ8WXG6 1647 aa13.77□□□□□ -0.21
SFSWAP-202ENST00000535202 SIGLEC1Q9BZZ2 1709 aa13.76□□□□□ -0.21
SFSWAP-202ENST00000535202 PTPRMP28827 1452 aa13.75□□□□□ -0.21
SFSWAP-202ENST00000535202 CDC42BPAQ5VT25 1732 aa13.75□□□□□ -0.21
SFSWAP-202ENST00000535202 CEP162Q5TB80 1403 aa13.74□□□□□ -0.21
SFSWAP-202ENST00000535202 RIMS1Q86UR5 1692 aaKnown RBP13.74□□□□□ -0.21
SFSWAP-202ENST00000535202 ZNF518AQ6AHZ1 1483 aa13.74□□□□□ -0.21
SFSWAP-202ENST00000535202 ITSN2Q9NZM3 1697 aa13.72□□□□□ -0.21
SFSWAP-202ENST00000535202 KDM5CP41229 1560 aa13.72□□□□□ -0.21
SFSWAP-202ENST00000535202 ABCC1P33527 1531 aa13.72□□□□□ -0.21
SFSWAP-202ENST00000535202 MYT1LQ9UL68 1186 aa13.71□□□□□ -0.21
SFSWAP-202ENST00000535202 C9orf84Q5VXU9 1444 aa13.71□□□□□ -0.22
SFSWAP-202ENST00000535202 ATP10AO60312 1499 aa13.7□□□□□ -0.22
SFSWAP-202ENST00000535202 MLECQ14165 292 aa13.7□□□□□ -0.22
SFSWAP-202ENST00000535202 AFAP1Q8N556 730 aa13.7□□□□□ -0.22
SFSWAP-202ENST00000535202 FER1L4A9Z1Z3 1794 aa13.69□□□□□ -0.22
SFSWAP-202ENST00000535202 MTUS2Q5JR59 1369 aa13.69□□□□□ -0.22
SFSWAP-202ENST00000535202 ARHGEF12Q9NZN5 1544 aa13.69□□□□□ -0.22
SFSWAP-202ENST00000535202 TRAPPC8Q9Y2L5 1435 aa13.68□□□□□ -0.22
SFSWAP-202ENST00000535202 PLPPR3Q6T4P5 718 aa13.68□□□□□ -0.22
SFSWAP-202ENST00000535202 ZNF777Q9ULD5 760 aaPredicted RBP13.68□□□□□ -0.22
SFSWAP-202ENST00000535202 SAMD9LQ8IVG5 1584 aa13.67□□□□□ -0.22
SFSWAP-202ENST00000535202 DIP2CQ9Y2E4 1556 aa13.67□□□□□ -0.22
SFSWAP-202ENST00000535202 GPATCH8Q9UKJ3 1502 aaKnown RBP13.67□□□□□ -0.22
SFSWAP-202ENST00000535202 ABCA6Q8N139 1617 aa13.67□□□□□ -0.22
SFSWAP-202ENST00000535202 EHBP1L1Q8N3D4 1523 aa13.66□□□□□ -0.22
SFSWAP-202ENST00000535202 LOC105371045A0A1W2PR82 267 aa13.66□□□□□ -0.22
SFSWAP-202ENST00000535202 SYCP2Q9BX26 1530 aa13.65□□□□□ -0.22
SFSWAP-202ENST00000535202 CCNB3Q8WWL7 1395 aa13.65□□□□□ -0.22
SFSWAP-202ENST00000535202 MLH3Q9UHC1 1453 aa13.65□□□□□ -0.22
SFSWAP-202ENST00000535202 KIDINS220Q9ULH0 1771 aa13.63□□□□□ -0.23
SFSWAP-202ENST00000535202 CFDP1Q9UEE9 299 aaPredicted RBP13.63□□□□□ -0.23
SFSWAP-202ENST00000535202 TIAM1Q13009 1591 aa13.62□□□□□ -0.23
SFSWAP-202ENST00000535202 REREQ9P2R6 1566 aa13.62□□□□□ -0.23
SFSWAP-202ENST00000535202 HNRNPMP52272 730 aaKnown RBP eCLIP13.61□□□□□ -0.23
SFSWAP-202ENST00000535202 PLEKHH2Q8IVE3 1493 aa13.61□□□□□ -0.23
SFSWAP-202ENST00000535202 LMTK3Q96Q04 1460 aa13.61□□□□□ -0.23
SFSWAP-202ENST00000535202 SUPT6HQ7KZ85 1726 aaKnown RBP13.59□□□□□ -0.23
SFSWAP-202ENST00000535202 VPS8Q8N3P4 1428 aa13.59□□□□□ -0.23
SFSWAP-202ENST00000535202 KIAA1107Q9UPP5 1409 aa13.58□□□□□ -0.24
SFSWAP-202ENST00000535202 AGLP35573 1532 aa13.58□□□□□ -0.24
SFSWAP-202ENST00000535202 SPAG9O60271 1321 aaKnown RBP13.58□□□□□ -0.24
SFSWAP-202ENST00000535202 ATP7AQ04656 1500 aa13.57□□□□□ -0.24
SFSWAP-202ENST00000535202 NCOA2Q15596 1464 aa13.56□□□□□ -0.24
SFSWAP-202ENST00000535202 INO80Q9ULG1 1556 aaPredicted RBP13.56□□□□□ -0.24
SFSWAP-202ENST00000535202 CEBPAP49715 358 aaPredicted RBP13.55□□□□□ -0.24
SFSWAP-202ENST00000535202 ZNF644Q9H582 1327 aaPredicted RBP13.55□□□□□ -0.24
SFSWAP-202ENST00000535202 PREX1Q8TCU6 1659 aa13.54□□□□□ -0.24
SFSWAP-202ENST00000535202 HSPA2P54652 639 aa13.54□□□□□ -0.24
SFSWAP-202ENST00000535202 ESF1Q9H501 851 aaKnown RBP13.54□□□□□ -0.24
SFSWAP-202ENST00000535202 C3P01024 1663 aa13.53□□□□□ -0.24
SFSWAP-202ENST00000535202 LRRC9Q6ZRR7 1453 aa13.52□□□□□ -0.25
SFSWAP-202ENST00000535202 ADGBQ8N7X0 1667 aa13.51□□□□□ -0.25
SFSWAP-202ENST00000535202 PLXNC1O60486 1568 aa13.51□□□□□ -0.25
SFSWAP-202ENST00000535202 A2MP01023 1474 aa13.51□□□□□ -0.25
SFSWAP-202ENST00000535202 CAMSAP2Q08AD1 1489 aa13.51□□□□□ -0.25
SFSWAP-202ENST00000535202 MBD5Q9P267 1494 aa13.51□□□□□ -0.25
SFSWAP-202ENST00000535202 ILDR1Q86SU0 546 aaPredicted RBP13.5□□□□□ -0.25
SFSWAP-202ENST00000535202 CNTLNQ9NXG0 1405 aa13.49□□□□□ -0.25
SFSWAP-202ENST00000535202 MAP3K1Q13233 1512 aa13.49□□□□□ -0.25
SFSWAP-202ENST00000535202 CCDC141Q6ZP82 1450 aa13.48□□□□□ -0.25
SFSWAP-202ENST00000535202 UHRF1BP1Q6BDS2 1440 aa13.47□□□□□ -0.25
SFSWAP-202ENST00000535202 MROH2AA6NES4 1674 aa13.47□□□□□ -0.25
SFSWAP-202ENST00000535202 CLTCQ00610 1675 aaKnown RBP13.47□□□□□ -0.25
SFSWAP-202ENST00000535202 SETD1BQ9UPS6 1966 aaKnown RBP13.47□□□□□ -0.25
SFSWAP-202ENST00000535202 KANK4Q5T7N3 995 aaPredicted RBP13.47□□□□□ -0.25
SFSWAP-202ENST00000535202 RTEL1-TNFRSF6BF6WH68 1400 aa13.47□□□□□ -0.25
SFSWAP-202ENST00000535202 GGT6Q6P531 493 aa13.45□□□□□ -0.26
SFSWAP-202ENST00000535202 ARHGEF5Q12774 1597 aa13.45□□□□□ -0.26
SFSWAP-202ENST00000535202 APLP2Q06481 763 aa13.43□□□□□ -0.26
SFSWAP-202ENST00000535202 RSPH4AQ5TD94 716 aa13.43□□□□□ -0.26
SFSWAP-202ENST00000535202 ZMYM3Q14202 1370 aa13.43□□□□□ -0.26
SFSWAP-202ENST00000535202 MYOM3Q5VTT5 1437 aa13.42□□□□□ -0.26
SFSWAP-202ENST00000535202 DHX29Q7Z478 1369 aaKnown RBP13.42□□□□□ -0.26
SFSWAP-202ENST00000535202 STRCQ7RTU9 1775 aa13.4□□□□□ -0.26
SFSWAP-202ENST00000535202 NPATQ14207 1427 aa13.4□□□□□ -0.26
SFSWAP-202ENST00000535202 TSPY4P0CV99 314 aa13.4□□□□□ -0.26
SFSWAP-202ENST00000535202 TSPY10P0CW01 314 aa13.4□□□□□ -0.26
SFSWAP-202ENST00000535202 MIA2Q96PC5 1412 aa13.39□□□□□ -0.27
SFSWAP-202ENST00000535202 KIF3BO15066 747 aa13.39□□□□□ -0.27
SFSWAP-202ENST00000535202 MAST1Q9Y2H9 1570 aa13.38□□□□□ -0.27
SFSWAP-202ENST00000535202 MYO3AQ8NEV4 1616 aa13.38□□□□□ -0.27
SFSWAP-202ENST00000535202 PPP6R1Q9UPN7 881 aa13.37□□□□□ -0.27
SFSWAP-202ENST00000535202 PTPRKQ15262 1439 aa13.37□□□□□ -0.27
SFSWAP-202ENST00000535202 PTPN23Q9H3S7 1636 aa13.36□□□□□ -0.27
SFSWAP-202ENST00000535202 KDM5DQ9BY66 1539 aa13.36□□□□□ -0.27
SFSWAP-202ENST00000535202 FBXO41Q8TF61 875 aa13.36□□□□□ -0.27
SFSWAP-202ENST00000535202 ZNF142P52746 1687 aaPredicted RBP13.35□□□□□ -0.27
SFSWAP-202ENST00000535202 DMRT2Q9Y5R5 561 aa13.34□□□□□ -0.27
SFSWAP-202ENST00000535202 CAMSAP1Q5T5Y3 1602 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms