RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 HOXB3P14651 431 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-201ENST00000535076 POTEGQ6S5H5 508 aa8.54□□□□□ -1.04
SNHG1-201ENST00000535076 DCAF8L2P0C7V8 631 aa8.51□□□□□ -1.05
SNHG1-201ENST00000535076 AMER1Q5JTC6 1135 aaPredicted RBP8.5□□□□□ -1.05
SNHG1-201ENST00000535076 KIF3CO14782 793 aa8.48□□□□□ -1.05
SNHG1-201ENST00000535076 GTPBP6O43824 516 aaPredicted RBP8.47□□□□□ -1.05
SNHG1-201ENST00000535076 C2orf72A6NCS6 295 aa8.46□□□□□ -1.06
SNHG1-201ENST00000535076 MARVELD3Q96A59 401 aa8.46□□□□□ -1.06
SNHG1-201ENST00000535076 SNPHO15079 494 aa8.45□□□□□ -1.06
SNHG1-201ENST00000535076 POTEB3A0JP26 581 aa8.43□□□□□ -1.06
SNHG1-201ENST00000535076 POTEBQ6S5H4 581 aa8.43□□□□□ -1.06
SNHG1-201ENST00000535076 BCL11AQ9H165 835 aa8.39□□□□□ -1.07
SNHG1-201ENST00000535076 KHSRPQ92945 711 aaKnown RBP eCLIP8.38□□□□□ -1.073e-12■■■■□ 20.5
SNHG1-201ENST00000535076 HOXB1P14653 301 aaPredicted RBP8.37□□□□□ -1.07
SNHG1-201ENST00000535076 DOK7Q18PE1 504 aa8.37□□□□□ -1.07
SNHG1-201ENST00000535076 GPR153Q6NV75 609 aa8.37□□□□□ -1.07
SNHG1-201ENST00000535076 EMP3P54852 163 aa8.36□□□□□ -1.07
SNHG1-201ENST00000535076 CADPS2Q86UW7 1296 aa8.36□□□□□ -1.07
SNHG1-201ENST00000535076 TMC2Q8TDI7 906 aa8.36□□□□□ -1.07
SNHG1-201ENST00000535076 NCKAP5LQ9HCH0 1330 aa8.35□□□□□ -1.07
SNHG1-201ENST00000535076 CDAN1Q8IWY9 1227 aa8.35□□□□□ -1.07
SNHG1-201ENST00000535076 DSG2Q14126 1118 aa8.34□□□□□ -1.07
SNHG1-201ENST00000535076 ARSIQ5FYB1 569 aa8.34□□□□□ -1.07
SNHG1-201ENST00000535076 ZNF710Q8N1W2 664 aa8.34□□□□□ -1.07
SNHG1-201ENST00000535076 CRISPLD2Q9H0B8 497 aa8.34□□□□□ -1.07
SNHG1-201ENST00000535076 GPHNQ9NQX3 736 aaPredicted RBP8.34□□□□□ -1.07
SNHG1-201ENST00000535076 FAM205CA6NFA0 338 aa8.33□□□□□ -1.08
SNHG1-201ENST00000535076 BBXQ8WY36 941 aaPredicted RBP8.33□□□□□ -1.08
SNHG1-201ENST00000535076 HS3ST6Q96QI5 342 aa8.33□□□□□ -1.08
SNHG1-201ENST00000535076 RYDENQ9NUL5 291 aaKnown RBP8.32□□□□□ -1.08
SNHG1-201ENST00000535076 PLPP6Q8IY26 295 aa8.31□□□□□ -1.08
SNHG1-201ENST00000535076 EIF5BO60841 1220 aaKnown RBP8.3□□□□□ -1.08
SNHG1-201ENST00000535076 FOXK1P85037 733 aa8.3□□□□□ -1.08
SNHG1-201ENST00000535076 ZSWIM6Q9HCJ5 1215 aa8.3□□□□□ -1.08
SNHG1-201ENST00000535076 SLC34A2O95436 690 aa8.29□□□□□ -1.08
SNHG1-201ENST00000535076 PCDHGA4Q9Y5G9 962 aa8.29□□□□□ -1.08
SNHG1-201ENST00000535076 RIMBP2O15034 1052 aa8.28□□□□□ -1.08
SNHG1-201ENST00000535076 KRTAP3-3Q9BYR6 98 aa8.28□□□□□ -1.08
SNHG1-201ENST00000535076 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
SNHG1-201ENST00000535076 HRCP23327 699 aa8.27□□□□□ -1.09
SNHG1-201ENST00000535076 PCDH10Q9P2E7 1040 aa8.27□□□□□ -1.09
SNHG1-201ENST00000535076 KDM4FA0A1W2PPD8 638 aa8.26□□□□□ -1.09
SNHG1-201ENST00000535076 NUDT7P0C024 238 aa8.26□□□□□ -1.09
SNHG1-201ENST00000535076 VARS2Q5ST30 1063 aaKnown RBP8.26□□□□□ -1.09
SNHG1-201ENST00000535076 PLSCR2Q9NRY7 297 aa8.25□□□□□ -1.09
SNHG1-201ENST00000535076 ERBB3P21860 1342 aa8.25□□□□□ -1.09
SNHG1-201ENST00000535076 MFSD10Q14728 455 aa8.24□□□□□ -1.09
SNHG1-201ENST00000535076 PPP1R15BQ5SWA1 713 aa8.24□□□□□ -1.09
SNHG1-201ENST00000535076 PTCD2Q8WV60 388 aaKnown RBP8.24□□□□□ -1.09
SNHG1-201ENST00000535076 LARP6Q9BRS8 491 aaKnown RBP8.24□□□□□ -1.09
SNHG1-201ENST00000535076 ZNF316A6NFI3 1004 aaPredicted RBP8.22□□□□□ -1.09
SNHG1-201ENST00000535076 PAXIP1Q6ZW49 1069 aaPredicted RBP8.22□□□□□ -1.09
SNHG1-201ENST00000535076 OXER1Q8TDS5 423 aa8.22□□□□□ -1.09
SNHG1-201ENST00000535076 LHX6Q9UPM6 363 aa8.22□□□□□ -1.09
SNHG1-201ENST00000535076 PDE4AP27815 886 aa8.21□□□□□ -1.1
SNHG1-201ENST00000535076 SPRYD3Q8NCJ5 442 aa8.21□□□□□ -1.1
SNHG1-201ENST00000535076 UPF1Q92900 1129 aaKnown RBP eCLIP8.21□□□□□ -1.11e-26■□□□□ 8.6
SNHG1-201ENST00000535076 ARXQ96QS3 562 aa8.21□□□□□ -1.1
SNHG1-201ENST00000535076 CFAP44Q96MT7 982 aa8.2□□□□□ -1.1
SNHG1-201ENST00000535076 EMILIN3Q9NT22 766 aa8.2□□□□□ -1.1
SNHG1-201ENST00000535076 FAM9AQ8IZU1 332 aaPredicted RBP8.19□□□□□ -1.1
SNHG1-201ENST00000535076 DDX27Q96GQ7 796 aaKnown RBP8.19□□□□□ -1.1
SNHG1-201ENST00000535076 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.19□□□□□ -1.1
SNHG1-201ENST00000535076 POTEEQ6S8J3 1075 aa8.18□□□□□ -1.1
SNHG1-201ENST00000535076 CENPBP07199 599 aaPredicted RBP8.16□□□□□ -1.1
SNHG1-201ENST00000535076 SPNS2Q8IVW8 549 aa8.16□□□□□ -1.1
SNHG1-201ENST00000535076 ZNF687Q8N1G0 1237 aa8.16□□□□□ -1.1
SNHG1-201ENST00000535076 CAMK2BQ13554 666 aa8.12□□□□□ -1.11
SNHG1-201ENST00000535076 TSHZ2Q9NRE2 1034 aa8.12□□□□□ -1.11
SNHG1-201ENST00000535076 AXIN2Q9Y2T1 843 aa8.12□□□□□ -1.11
SNHG1-201ENST00000535076 RANGAP1P46060 587 aaPredicted RBP8.11□□□□□ -1.11
SNHG1-201ENST00000535076 MMRN1Q13201 1228 aa8.1□□□□□ -1.11
SNHG1-201ENST00000535076 TBC1D12O60347 775 aa8.08□□□□□ -1.12
SNHG1-201ENST00000535076 EVI5O60447 810 aa8.08□□□□□ -1.12
SNHG1-201ENST00000535076 ANO8Q9HCE9 1232 aaPredicted RBP8.08□□□□□ -1.12
SNHG1-201ENST00000535076 DPYSL4O14531 572 aa8.07□□□□□ -1.12
SNHG1-201ENST00000535076 DMRTA1Q5VZB9 504 aa8.06□□□□□ -1.12
SNHG1-201ENST00000535076 PSEN2P49810 448 aa8.05□□□□□ -1.12
SNHG1-201ENST00000535076 FOSBP53539 338 aa8.05□□□□□ -1.12
SNHG1-201ENST00000535076 LSM11P83369 360 aaKnown RBP eCLIP8.05□□□□□ -1.121e-6■□□□□ 9.9
SNHG1-201ENST00000535076 MAP3K9P80192 1104 aa8.04□□□□□ -1.12
SNHG1-201ENST00000535076 ZNF454Q8N9F8 522 aa8.04□□□□□ -1.12
SNHG1-201ENST00000535076 UBE2Q2Q8WVN8 375 aa8.04□□□□□ -1.12
SNHG1-201ENST00000535076 PBX2P40425 430 aa8.03□□□□□ -1.12
SNHG1-201ENST00000535076 PPP4R3BQ5MIZ7 849 aa8.03□□□□□ -1.12
SNHG1-201ENST00000535076 ANKRD13DQ6ZTN6 518 aa8.03□□□□□ -1.12
SNHG1-201ENST00000535076 PSDA5PKW4 1024 aaPredicted RBP8.02□□□□□ -1.13
SNHG1-201ENST00000535076 ARHGAP33O14559 1287 aa8.01□□□□□ -1.13
SNHG1-201ENST00000535076 JPH4Q96JJ6 628 aa8.01□□□□□ -1.13
SNHG1-201ENST00000535076 ADAM33Q9BZ11 813 aa8.01□□□□□ -1.13
SNHG1-201ENST00000535076 PCDHGA10Q9Y5H3 936 aa8.01□□□□□ -1.13
SNHG1-201ENST00000535076 KCNK17Q96T54 332 aa8□□□□□ -1.13
SNHG1-201ENST00000535076 PLCB2Q00722 1185 aa7.99□□□□□ -1.13
SNHG1-201ENST00000535076 E2F4Q16254 413 aa7.99□□□□□ -1.13
SNHG1-201ENST00000535076 BCL2L12Q9HB09 334 aa7.98□□□□□ -1.13
SNHG1-201ENST00000535076 PRIM1P49642 420 aaKnown RBP7.97□□□□□ -1.13
SNHG1-201ENST00000535076 PDIA6Q15084 440 aa7.97□□□□□ -1.13
SNHG1-201ENST00000535076 ADGRD1Q6QNK2 874 aa7.97□□□□□ -1.13
SNHG1-201ENST00000535076 ZDHHC16Q969W1 377 aa7.96□□□□□ -1.14
SNHG1-201ENST00000535076 ARIH1Q9Y4X5 557 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms