RNA–Protein interactions for RNA: ENST00000534946.5

LMO3-211, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-211ENST00000534946 PREX2Q70Z35 1606 aa18.4■□□□□ 0.54
LMO3-211ENST00000534946 SUPT6HQ7KZ85 1726 aaKnown RBP18.4■□□□□ 0.54
LMO3-211ENST00000534946 PLCH2O75038 1416 aa18.4■□□□□ 0.54
LMO3-211ENST00000534946 FANCAO15360 1455 aa18.39■□□□□ 0.53
LMO3-211ENST00000534946 LRRC9Q6ZRR7 1453 aa18.39■□□□□ 0.53
LMO3-211ENST00000534946 ITSN2Q9NZM3 1697 aa18.37■□□□□ 0.53
LMO3-211ENST00000534946 ARHGAP5Q13017 1502 aa18.36■□□□□ 0.53
LMO3-211ENST00000534946 CDC42BPAQ5VT25 1732 aa18.34■□□□□ 0.53
LMO3-211ENST00000534946 CCNB3Q8WWL7 1395 aa18.33■□□□□ 0.53
LMO3-211ENST00000534946 NCOA2Q15596 1464 aa18.32■□□□□ 0.52
LMO3-211ENST00000534946 AKNAQ7Z591 1439 aa18.32■□□□□ 0.52
LMO3-211ENST00000534946 EFCAB2Q5VUJ9 269 aa18.31■□□□□ 0.52
LMO3-211ENST00000534946 CDC42BPBQ9Y5S2 1711 aa18.31■□□□□ 0.52
LMO3-211ENST00000534946 GPATCH8Q9UKJ3 1502 aaKnown RBP18.3■□□□□ 0.52
LMO3-211ENST00000534946 ADGRL1O94910 1474 aa18.3■□□□□ 0.52
LMO3-211ENST00000534946 DENND4BO75064 1496 aaPredicted RBP18.28■□□□□ 0.52
LMO3-211ENST00000534946 PLEKHH2Q8IVE3 1493 aa18.28■□□□□ 0.52
LMO3-211ENST00000534946 ABCC1P33527 1531 aa18.27■□□□□ 0.51
LMO3-211ENST00000534946 COL17A1Q9UMD9 1497 aaPredicted RBP18.26■□□□□ 0.51
LMO3-211ENST00000534946 POGZQ7Z3K3 1410 aa18.25■□□□□ 0.51
LMO3-211ENST00000534946 ZMYM4Q5VZL5 1548 aa18.24■□□□□ 0.51
LMO3-211ENST00000534946 RICTORQ6R327 1708 aa18.24■□□□□ 0.51
LMO3-211ENST00000534946 ZNF518AQ6AHZ1 1483 aa18.24■□□□□ 0.51
LMO3-211ENST00000534946 FRMPD1Q5SYB0 1578 aa18.24■□□□□ 0.51
LMO3-211ENST00000534946 SAMD9LQ8IVG5 1584 aa18.22■□□□□ 0.51
LMO3-211ENST00000534946 CFDP1Q9UEE9 299 aaPredicted RBP18.22■□□□□ 0.51
LMO3-211ENST00000534946 MYOM3Q5VTT5 1437 aa18.22■□□□□ 0.51
LMO3-211ENST00000534946 SCAPERQ9BY12 1400 aa18.22■□□□□ 0.51
LMO3-211ENST00000534946 KANK4Q5T7N3 995 aaPredicted RBP18.21■□□□□ 0.51
LMO3-211ENST00000534946 KIAA1107Q9UPP5 1409 aa18.21■□□□□ 0.51
LMO3-211ENST00000534946 MIA2Q96PC5 1412 aa18.2■□□□□ 0.5
LMO3-211ENST00000534946 MAGI2Q86UL8 1455 aa18.2■□□□□ 0.5
LMO3-211ENST00000534946 KDM5CP41229 1560 aa18.19■□□□□ 0.5
LMO3-211ENST00000534946 ARHGEF40Q8TER5 1519 aa18.18■□□□□ 0.5
LMO3-211ENST00000534946 SYCP2Q9BX26 1530 aa18.18■□□□□ 0.5
LMO3-211ENST00000534946 CAMSAP2Q08AD1 1489 aa18.16■□□□□ 0.5
LMO3-211ENST00000534946 HECW2Q9P2P5 1572 aa18.16■□□□□ 0.5
LMO3-211ENST00000534946 ZFYVE16Q7Z3T8 1539 aa18.14■□□□□ 0.49
LMO3-211ENST00000534946 ZNF777Q9ULD5 760 aaPredicted RBP18.14■□□□□ 0.49
LMO3-211ENST00000534946 RAPGEF3O95398 923 aa18.13■□□□□ 0.49
LMO3-211ENST00000534946 FGD6Q6ZV73 1430 aa18.12■□□□□ 0.49
LMO3-211ENST00000534946 ARHGEF12Q9NZN5 1544 aa18.12■□□□□ 0.49
LMO3-211ENST00000534946 ARHGEF5Q12774 1597 aa18.12■□□□□ 0.49
LMO3-211ENST00000534946 CCDC141Q6ZP82 1450 aa18.11■□□□□ 0.49
LMO3-211ENST00000534946 MLH3Q9UHC1 1453 aa18.11■□□□□ 0.49
LMO3-211ENST00000534946 TRAPPC8Q9Y2L5 1435 aa18.1■□□□□ 0.49
LMO3-211ENST00000534946 PTPN23Q9H3S7 1636 aa18.09■□□□□ 0.49
LMO3-211ENST00000534946 PIAS4Q8N2W9 510 aaPredicted RBP18.09■□□□□ 0.49
LMO3-211ENST00000534946 SLC4A1APQ9BWU0 796 aaKnown RBP18.09■□□□□ 0.49
LMO3-211ENST00000534946 TCOF1Q13428 1488 aaKnown RBP18.08■□□□□ 0.49
LMO3-211ENST00000534946 MBD5Q9P267 1494 aa18.08■□□□□ 0.49
LMO3-211ENST00000534946 RSPH4AQ5TD94 716 aa18.08■□□□□ 0.48
LMO3-211ENST00000534946 PPP4R3CPQ6ZMV5 832 aa18.08■□□□□ 0.48
LMO3-211ENST00000534946 INO80Q9ULG1 1556 aaPredicted RBP18.08■□□□□ 0.48
LMO3-211ENST00000534946 REREQ9P2R6 1566 aa18.06■□□□□ 0.48
LMO3-211ENST00000534946 ATP7AQ04656 1500 aa18.06■□□□□ 0.48
LMO3-211ENST00000534946 AFAP1Q8N556 730 aa18.04■□□□□ 0.48
LMO3-211ENST00000534946 RTEL1-TNFRSF6BF6WH68 1400 aa18.04■□□□□ 0.48
LMO3-211ENST00000534946 C9orf84Q5VXU9 1444 aa18.04■□□□□ 0.48
LMO3-211ENST00000534946 DIP2CQ9Y2E4 1556 aa18.04■□□□□ 0.48
LMO3-211ENST00000534946 SPAG9O60271 1321 aaKnown RBP18.03■□□□□ 0.48
LMO3-211ENST00000534946 ZNF644Q9H582 1327 aaPredicted RBP18.03■□□□□ 0.48
LMO3-211ENST00000534946 ATP10AO60312 1499 aa18.03■□□□□ 0.48
LMO3-211ENST00000534946 SHANK2Q9UPX8 1470 aa18.03■□□□□ 0.48
LMO3-211ENST00000534946 ABCA6Q8N139 1617 aa18.03■□□□□ 0.48
LMO3-211ENST00000534946 HNRNPMP52272 730 aaKnown RBP eCLIP18.03■□□□□ 0.48
LMO3-211ENST00000534946 YEATS2Q9ULM3 1422 aa18.03■□□□□ 0.48
LMO3-211ENST00000534946 KIDINS220Q9ULH0 1771 aa18.02■□□□□ 0.48
LMO3-211ENST00000534946 MAST1Q9Y2H9 1570 aa18.02■□□□□ 0.48
LMO3-211ENST00000534946 DNMT1P26358 1616 aaKnown RBP18.01■□□□□ 0.47
LMO3-211ENST00000534946 CROCC2H7BZ55 1655 aa18.01■□□□□ 0.47
LMO3-211ENST00000534946 MYT1LQ9UL68 1186 aa18■□□□□ 0.47
LMO3-211ENST00000534946 ADGBQ8N7X0 1667 aa17.99■□□□□ 0.47
LMO3-211ENST00000534946 PLXNC1O60486 1568 aa17.97■□□□□ 0.47
LMO3-211ENST00000534946 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.97■□□□□ 0.47
LMO3-211ENST00000534946 TSPY4P0CV99 314 aa17.97■□□□□ 0.47
LMO3-211ENST00000534946 TSPY10P0CW01 314 aa17.97■□□□□ 0.47
LMO3-211ENST00000534946 AGLP35573 1532 aa17.97■□□□□ 0.47
LMO3-211ENST00000534946 DAPK1P53355 1430 aa17.96■□□□□ 0.47
LMO3-211ENST00000534946 RRBP1Q9P2E9 1410 aaKnown RBP17.94■□□□□ 0.46
LMO3-211ENST00000534946 A2MP01023 1474 aa17.93■□□□□ 0.46
LMO3-211ENST00000534946 BCORL1Q5H9F3 1711 aa17.92■□□□□ 0.46
LMO3-211ENST00000534946 ABCC5O15440 1437 aa17.92■□□□□ 0.46
LMO3-211ENST00000534946 FAM50AQ14320 339 aaKnown RBP17.91■□□□□ 0.46
LMO3-211ENST00000534946 ARID4BQ4LE39 1312 aaPredicted RBP17.91■□□□□ 0.46
LMO3-211ENST00000534946 PPARGC1BQ86YN6 1023 aaKnown RBP17.89■□□□□ 0.45
LMO3-211ENST00000534946 ADGRL2O95490 1459 aa17.88■□□□□ 0.45
LMO3-211ENST00000534946 SIGLEC1Q9BZZ2 1709 aa17.88■□□□□ 0.45
LMO3-211ENST00000534946 DUOX2Q9NRD8 1548 aa17.88■□□□□ 0.45
LMO3-211ENST00000534946 EIF2AK4Q9P2K8 1649 aaKnown RBP17.87■□□□□ 0.45
LMO3-211ENST00000534946 ADAMTSL3P82987 1691 aa17.87■□□□□ 0.45
LMO3-211ENST00000534946 ANKRD30AQ9BXX3 1397 aa17.87■□□□□ 0.45
LMO3-211ENST00000534946 FAM135AQ9P2D6 1515 aa17.87■□□□□ 0.45
LMO3-211ENST00000534946 NCBP3Q53F19 620 aaKnown RBP17.86■□□□□ 0.45
LMO3-211ENST00000534946 DHX29Q7Z478 1369 aaKnown RBP17.86■□□□□ 0.45
LMO3-211ENST00000534946 ERBINQ96RT1 1412 aa17.84■□□□□ 0.45
LMO3-211ENST00000534946 KIF15Q9NS87 1388 aa17.84■□□□□ 0.45
LMO3-211ENST00000534946 MADDQ8WXG6 1647 aa17.83■□□□□ 0.45
LMO3-211ENST00000534946 FER1L4A9Z1Z3 1794 aa17.83■□□□□ 0.44
LMO3-211ENST00000534946 ROCK1Q13464 1354 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms