RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 MAGI2Q86UL8 1455 aa30.13■■■□□ 2.41
CTSB-233ENST00000534636 POGZQ7Z3K3 1410 aa30.13■■■□□ 2.41
CTSB-233ENST00000534636 SCAPERQ9BY12 1400 aa30.13■■■□□ 2.41
CTSB-233ENST00000534636 PCF11O94913 1555 aaKnown RBP30.12■■■□□ 2.41
CTSB-233ENST00000534636 CCDC18Q5T9S5 1454 aa30.12■■■□□ 2.41
CTSB-233ENST00000534636 EFCAB2Q5VUJ9 269 aa30.1■■■□□ 2.41
CTSB-233ENST00000534636 CASKIN1Q8WXD9 1431 aa30.09■■■□□ 2.41
CTSB-233ENST00000534636 ARHGAP5Q13017 1502 aa30.08■■■□□ 2.41
CTSB-233ENST00000534636 YEATS2Q9ULM3 1422 aa30.06■■■□□ 2.4
CTSB-233ENST00000534636 RIMS1Q86UR5 1692 aaKnown RBP30.05■■■□□ 2.4
CTSB-233ENST00000534636 FYCO1Q9BQS8 1478 aa30.02■■■□□ 2.4
CTSB-233ENST00000534636 ZNF518AQ6AHZ1 1483 aa29.99■■■□□ 2.39
CTSB-233ENST00000534636 SIGLEC1Q9BZZ2 1709 aa29.98■■■□□ 2.39
CTSB-233ENST00000534636 CDC42BPBQ9Y5S2 1711 aa29.97■■■□□ 2.39
CTSB-233ENST00000534636 PREX2Q70Z35 1606 aa29.96■■■□□ 2.39
CTSB-233ENST00000534636 C9orf84Q5VXU9 1444 aa29.95■■■□□ 2.38
CTSB-233ENST00000534636 FER1L4A9Z1Z3 1794 aa29.95■■■□□ 2.38
CTSB-233ENST00000534636 ATP10AO60312 1499 aa29.94■■■□□ 2.38
CTSB-233ENST00000534636 KDM5CP41229 1560 aa29.93■■■□□ 2.38
CTSB-233ENST00000534636 MLECQ14165 292 aa29.9■■■□□ 2.38
CTSB-233ENST00000534636 MYT1LQ9UL68 1186 aa29.89■■■□□ 2.38
CTSB-233ENST00000534636 CDC42BPAQ5VT25 1732 aa29.88■■■□□ 2.37
CTSB-233ENST00000534636 ABCC1P33527 1531 aa29.86■■■□□ 2.37
CTSB-233ENST00000534636 PLPPR3Q6T4P5 718 aa29.85■■■□□ 2.37
CTSB-233ENST00000534636 ILDR1Q86SU0 546 aaPredicted RBP29.85■■■□□ 2.37
CTSB-233ENST00000534636 AFAP1Q8N556 730 aa29.85■■■□□ 2.37
CTSB-233ENST00000534636 LMTK3Q96Q04 1460 aa29.85■■■□□ 2.37
CTSB-233ENST00000534636 ITSN2Q9NZM3 1697 aa29.85■■■□□ 2.37
CTSB-233ENST00000534636 ARHGEF12Q9NZN5 1544 aa29.82■■■□□ 2.36
CTSB-233ENST00000534636 DIP2CQ9Y2E4 1556 aa29.81■■■□□ 2.36
CTSB-233ENST00000534636 MLH3Q9UHC1 1453 aa29.79■■■□□ 2.36
CTSB-233ENST00000534636 ABCA6Q8N139 1617 aa29.78■■■□□ 2.36
CTSB-233ENST00000534636 REREQ9P2R6 1566 aa29.77■■■□□ 2.36
CTSB-233ENST00000534636 TRAPPC8Q9Y2L5 1435 aa29.76■■■□□ 2.35
CTSB-233ENST00000534636 ZNF777Q9ULD5 760 aaPredicted RBP29.71■■■□□ 2.35
CTSB-233ENST00000534636 MTUS2Q5JR59 1369 aa29.71■■■□□ 2.35
CTSB-233ENST00000534636 SAMD9LQ8IVG5 1584 aa29.71■■■□□ 2.35
CTSB-233ENST00000534636 GPATCH8Q9UKJ3 1502 aaKnown RBP29.71■■■□□ 2.35
CTSB-233ENST00000534636 SYCP2Q9BX26 1530 aa29.69■■■□□ 2.34
CTSB-233ENST00000534636 KIDINS220Q9ULH0 1771 aa29.69■■■□□ 2.34
CTSB-233ENST00000534636 CCNB3Q8WWL7 1395 aa29.67■■■□□ 2.34
CTSB-233ENST00000534636 PREX1Q8TCU6 1659 aa29.67■■■□□ 2.34
CTSB-233ENST00000534636 CEP162Q5TB80 1403 aa29.67■■■□□ 2.34
CTSB-233ENST00000534636 AGLP35573 1532 aa29.66■■■□□ 2.34
CTSB-233ENST00000534636 PLEKHH2Q8IVE3 1493 aa29.65■■■□□ 2.34
CTSB-233ENST00000534636 HSPA2P54652 639 aa29.64■■■□□ 2.34
CTSB-233ENST00000534636 CFDP1Q9UEE9 299 aaPredicted RBP29.64■■■□□ 2.34
CTSB-233ENST00000534636 EHBP1L1Q8N3D4 1523 aa29.64■■■□□ 2.34
CTSB-233ENST00000534636 ESF1Q9H501 851 aaKnown RBP29.62■■■□□ 2.33
CTSB-233ENST00000534636 KIAA1107Q9UPP5 1409 aa29.59■■■□□ 2.33
CTSB-233ENST00000534636 SPAG9O60271 1321 aaKnown RBP29.58■■■□□ 2.33
CTSB-233ENST00000534636 SETD1BQ9UPS6 1966 aaKnown RBP29.58■■■□□ 2.33
CTSB-233ENST00000534636 CEBPAP49715 358 aaPredicted RBP29.57■■■□□ 2.32
CTSB-233ENST00000534636 HNRNPMP52272 730 aaKnown RBP eCLIP29.56■■■□□ 2.32
CTSB-233ENST00000534636 TIAM1Q13009 1591 aa29.56■■■□□ 2.32
CTSB-233ENST00000534636 ATP7AQ04656 1500 aa29.55■■■□□ 2.32
CTSB-233ENST00000534636 C3P01024 1663 aa29.55■■■□□ 2.32
CTSB-233ENST00000534636 UHRF1BP1Q6BDS2 1440 aa29.54■■■□□ 2.32
CTSB-233ENST00000534636 INO80Q9ULG1 1556 aaPredicted RBP29.53■■■□□ 2.32
CTSB-233ENST00000534636 CNTLNQ9NXG0 1405 aa29.52■■■□□ 2.32
CTSB-233ENST00000534636 SUPT6HQ7KZ85 1726 aaKnown RBP29.51■■■□□ 2.32
CTSB-233ENST00000534636 FBXO41Q8TF61 875 aa29.51■■■□□ 2.31
CTSB-233ENST00000534636 MROH2AA6NES4 1674 aa29.45■■■□□ 2.31
CTSB-233ENST00000534636 ADGBQ8N7X0 1667 aa29.44■■■□□ 2.3
CTSB-233ENST00000534636 PLXNC1O60486 1568 aa29.44■■■□□ 2.3
CTSB-233ENST00000534636 A2MP01023 1474 aa29.44■■■□□ 2.3
CTSB-233ENST00000534636 NCOA2Q15596 1464 aa29.4■■■□□ 2.3
CTSB-233ENST00000534636 ZNF644Q9H582 1327 aaPredicted RBP29.39■■■□□ 2.3
CTSB-233ENST00000534636 VPS8Q8N3P4 1428 aa29.37■■■□□ 2.29
CTSB-233ENST00000534636 MBD5Q9P267 1494 aa29.36■■■□□ 2.29
CTSB-233ENST00000534636 DMRT2Q9Y5R5 561 aa29.36■■■□□ 2.29
CTSB-233ENST00000534636 CLTCQ00610 1675 aaKnown RBP29.36■■■□□ 2.29
CTSB-233ENST00000534636 STRCQ7RTU9 1775 aa29.36■■■□□ 2.29
CTSB-233ENST00000534636 NPATQ14207 1427 aa29.34■■■□□ 2.29
CTSB-233ENST00000534636 CAMSAP2Q08AD1 1489 aa29.34■■■□□ 2.29
CTSB-233ENST00000534636 RTEL1-TNFRSF6BF6WH68 1400 aa29.33■■■□□ 2.29
CTSB-233ENST00000534636 CCDC141Q6ZP82 1450 aa29.33■■■□□ 2.29
CTSB-233ENST00000534636 ZMYM3Q14202 1370 aa29.31■■■□□ 2.28
CTSB-233ENST00000534636 LOC105371045A0A1W2PR82 267 aa29.31■■■□□ 2.28
CTSB-233ENST00000534636 GGT6Q6P531 493 aa29.3■■■□□ 2.28
CTSB-233ENST00000534636 CERKQ8TCT0 537 aa29.27■■■□□ 2.28
CTSB-233ENST00000534636 LRRC9Q6ZRR7 1453 aa29.27■■■□□ 2.28
CTSB-233ENST00000534636 RSPH4AQ5TD94 716 aa29.26■■■□□ 2.27
CTSB-233ENST00000534636 PPP6R1Q9UPN7 881 aa29.25■■■□□ 2.27
CTSB-233ENST00000534636 DHX29Q7Z478 1369 aaKnown RBP29.23■■■□□ 2.27
CTSB-233ENST00000534636 ARHGEF5Q12774 1597 aa29.22■■■□□ 2.27
CTSB-233ENST00000534636 MYO3AQ8NEV4 1616 aa29.22■■■□□ 2.27
CTSB-233ENST00000534636 PTPRTO14522 1441 aa29.21■■■□□ 2.27
CTSB-233ENST00000534636 MAP3K1Q13233 1512 aa29.2■■■□□ 2.27
CTSB-233ENST00000534636 ZNF142P52746 1687 aaPredicted RBP29.2■■■□□ 2.26
CTSB-233ENST00000534636 NCOA1Q15788 1441 aa29.2■■■□□ 2.26
CTSB-233ENST00000534636 CAMSAP1Q5T5Y3 1602 aa29.19■■■□□ 2.26
CTSB-233ENST00000534636 PTPRKQ15262 1439 aa29.18■■■□□ 2.26
CTSB-233ENST00000534636 TSPY4P0CV99 314 aa29.16■■■□□ 2.26
CTSB-233ENST00000534636 TSPY10P0CW01 314 aa29.16■■■□□ 2.26
CTSB-233ENST00000534636 FAM135AQ9P2D6 1515 aa29.15■■■□□ 2.26
CTSB-233ENST00000534636 CEP170BQ9Y4F5 1589 aaPredicted RBP29.15■■■□□ 2.26
CTSB-233ENST00000534636 KIF3BO15066 747 aa29.14■■■□□ 2.26
CTSB-233ENST00000534636 KDM5DQ9BY66 1539 aa29.13■■■□□ 2.25
CTSB-233ENST00000534636 KANK4Q5T7N3 995 aaPredicted RBP29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms