RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 VARS2Q5ST30 1063 aaKnown RBP11.08□□□□□ -0.64
ATM-224ENST00000534625 MICALL2Q8IY33 904 aa11.08□□□□□ -0.64
ATM-224ENST00000534625 BCL11BQ9C0K0 894 aaPredicted RBP11.08□□□□□ -0.64
ATM-224ENST00000534625 RIMBP2O15034 1052 aa11.07□□□□□ -0.64
ATM-224ENST00000534625 SOX12O15370 315 aa11.06□□□□□ -0.64
ATM-224ENST00000534625 MS4A4AQ96JQ5 239 aa11.06□□□□□ -0.64
ATM-224ENST00000534625 TAOK2Q9UL54 1235 aa11.05□□□□□ -0.64
ATM-224ENST00000534625 PHF8Q9UPP1 1060 aa11.04□□□□□ -0.64
ATM-224ENST00000534625 STK24Q9Y6E0 443 aa11.04□□□□□ -0.64
ATM-224ENST00000534625 STK25O00506 426 aa11.03□□□□□ -0.64
ATM-224ENST00000534625 RNF166Q96A37 237 aaPredicted RBP11.02□□□□□ -0.65
ATM-224ENST00000534625 GPR153Q6NV75 609 aa11.01□□□□□ -0.65
ATM-224ENST00000534625 ZNF687Q8N1G0 1237 aa11□□□□□ -0.65
ATM-224ENST00000534625 FBXO22Q8NEZ5 403 aa11□□□□□ -0.65
ATM-224ENST00000534625 ZSWIM6Q9HCJ5 1215 aa11□□□□□ -0.65
ATM-224ENST00000534625 MFRPQ9BY79 579 aa10.98□□□□□ -0.65
ATM-224ENST00000534625 MYT1LQ9UL68 1186 aa10.97□□□□□ -0.65
ATM-224ENST00000534625 ARSIQ5FYB1 569 aa10.95□□□□□ -0.66
ATM-224ENST00000534625 NLRP6P59044 892 aa10.94□□□□□ -0.66
ATM-224ENST00000534625 RB1CC1Q8TDY2 1594 aa10.92□□□□□ -0.66
ATM-224ENST00000534625 KHSRPQ92945 711 aaKnown RBP eCLIP10.92□□□□□ -0.66
ATM-224ENST00000534625 HS6ST3Q8IZP7 471 aa10.89□□□□□ -0.67
ATM-224ENST00000534625 ANKRD13DQ6ZTN6 518 aa10.88□□□□□ -0.67
ATM-224ENST00000534625 NACADO15069 1562 aa10.87□□□□□ -0.67
ATM-224ENST00000534625 ZNF316A6NFI3 1004 aaPredicted RBP10.87□□□□□ -0.67
ATM-224ENST00000534625 DCAF8L2P0C7V8 631 aa10.85□□□□□ -0.67
ATM-224ENST00000534625 CHGAP10645 457 aaKnown RBP10.84□□□□□ -0.67
ATM-224ENST00000534625 PPP1R37O75864 691 aa10.83□□□□□ -0.68
ATM-224ENST00000534625 PTGER2P43116 358 aa10.82□□□□□ -0.68
ATM-224ENST00000534625 DNAJC5Q9H3Z4 198 aa10.81□□□□□ -0.68
ATM-224ENST00000534625 LSM11P83369 360 aaKnown RBP eCLIP10.8□□□□□ -0.68
ATM-224ENST00000534625 NKX1-1Q15270 411 aaPredicted RBP10.8□□□□□ -0.68
ATM-224ENST00000534625 C2orf72A6NCS6 295 aa10.78□□□□□ -0.68
ATM-224ENST00000534625 KIF3CO14782 793 aa10.78□□□□□ -0.68
ATM-224ENST00000534625 NUDT7P0C024 238 aa10.78□□□□□ -0.68
ATM-224ENST00000534625 POTEEQ6S8J3 1075 aa10.74□□□□□ -0.69
ATM-224ENST00000534625 LHX6Q9UPM6 363 aa10.74□□□□□ -0.69
ATM-224ENST00000534625 AXIN2Q9Y2T1 843 aa10.74□□□□□ -0.69
ATM-224ENST00000534625 MYO15BQ96JP2 1530 aa10.74□□□□□ -0.69
ATM-224ENST00000534625 PCDHGA4Q9Y5G9 962 aa10.71□□□□□ -0.69
ATM-224ENST00000534625 PBX2P40425 430 aa10.7□□□□□ -0.7
ATM-224ENST00000534625 UNC13AQ9UPW8 1703 aa10.68□□□□□ -0.7
ATM-224ENST00000534625 SLC34A2O95436 690 aa10.68□□□□□ -0.7
ATM-224ENST00000534625 TMC2Q8TDI7 906 aa10.66□□□□□ -0.7
ATM-224ENST00000534625 ZCCHC6Q5VYS8 1495 aaKnown RBP10.65□□□□□ -0.7
ATM-224ENST00000534625 GTPBP6O43824 516 aaPredicted RBP10.64□□□□□ -0.71
ATM-224ENST00000534625 BICRAQ9NZM4 1560 aa10.64□□□□□ -0.71
ATM-224ENST00000534625 RTN4Q9NQC3 1192 aaKnown RBP10.62□□□□□ -0.71
ATM-224ENST00000534625 PLA2G2EQ9NZK7 142 aa10.61□□□□□ -0.71
ATM-224ENST00000534625 DCAF1Q9Y4B6 1507 aa10.61□□□□□ -0.71
ATM-224ENST00000534625 ARHGAP33O14559 1287 aa10.6□□□□□ -0.71
ATM-224ENST00000534625 AMER1Q5JTC6 1135 aaPredicted RBP10.6□□□□□ -0.71
ATM-224ENST00000534625 ADGRD1Q6QNK2 874 aa10.6□□□□□ -0.71
ATM-224ENST00000534625 HCSTQ9UBK5 93 aa10.6□□□□□ -0.71
ATM-224ENST00000534625 RYDENQ9NUL5 291 aaKnown RBP10.59□□□□□ -0.71
ATM-224ENST00000534625 GPHNQ9NQX3 736 aaPredicted RBP10.57□□□□□ -0.72
ATM-224ENST00000534625 KDM4FA0A1W2PPD8 638 aa10.56□□□□□ -0.72
ATM-224ENST00000534625 PSEN2P49810 448 aa10.55□□□□□ -0.72
ATM-224ENST00000534625 PSDA5PKW4 1024 aaPredicted RBP10.54□□□□□ -0.72
ATM-224ENST00000534625 FOXK1P85037 733 aa10.54□□□□□ -0.72
ATM-224ENST00000534625 DMRTA1Q5VZB9 504 aa10.54□□□□□ -0.72
ATM-224ENST00000534625 DSG2Q14126 1118 aa10.53□□□□□ -0.72
ATM-224ENST00000534625 PTCD2Q8WV60 388 aaKnown RBP10.53□□□□□ -0.72
ATM-224ENST00000534625 PLPP6Q8IY26 295 aa10.52□□□□□ -0.73
ATM-224ENST00000534625 CRISPLD2Q9H0B8 497 aa10.52□□□□□ -0.73
ATM-224ENST00000534625 HRO43593 1189 aa10.51□□□□□ -0.73
ATM-224ENST00000534625 TK2O00142 265 aa10.5□□□□□ -0.73
ATM-224ENST00000534625 NCKAP5LQ9HCH0 1330 aa10.5□□□□□ -0.73
ATM-224ENST00000534625 SCRIBQ14160 1630 aa10.47□□□□□ -0.73
ATM-224ENST00000534625 BBXQ8WY36 941 aaPredicted RBP10.47□□□□□ -0.73
ATM-224ENST00000534625 KCTD12Q96CX2 325 aaKnown RBP10.47□□□□□ -0.73
ATM-224ENST00000534625 SHROOM4Q9ULL8 1493 aa10.46□□□□□ -0.74
ATM-224ENST00000534625 PPP4R3BQ5MIZ7 849 aa10.45□□□□□ -0.74
ATM-224ENST00000534625 CADPS2Q86UW7 1296 aa10.44□□□□□ -0.74
ATM-224ENST00000534625 TBC1D12O60347 775 aa10.43□□□□□ -0.74
ATM-224ENST00000534625 STAC3Q96MF2 364 aa10.43□□□□□ -0.74
ATM-224ENST00000534625 PDE4AP27815 886 aa10.42□□□□□ -0.74
ATM-224ENST00000534625 PPP1R15BQ5SWA1 713 aa10.42□□□□□ -0.74
ATM-224ENST00000534625 KCNK17Q96T54 332 aa10.41□□□□□ -0.74
ATM-224ENST00000534625 MFSD10Q14728 455 aa10.4□□□□□ -0.74
ATM-224ENST00000534625 OXER1Q8TDS5 423 aa10.39□□□□□ -0.75
ATM-224ENST00000534625 LARP6Q9BRS8 491 aaKnown RBP10.39□□□□□ -0.75
ATM-224ENST00000534625 PTPN5P54829 565 aa10.37□□□□□ -0.75
ATM-224ENST00000534625 VPS9D1Q9Y2B5 631 aa10.37□□□□□ -0.75
ATM-224ENST00000534625 CC2D2AQ9P2K1 1620 aa10.36□□□□□ -0.75
ATM-224ENST00000534625 EIF4G1Q04637 1599 aaKnown RBP10.35□□□□□ -0.75
ATM-224ENST00000534625 UPF1Q92900 1129 aaKnown RBP eCLIP10.35□□□□□ -0.75
ATM-224ENST00000534625 DDX27Q96GQ7 796 aaKnown RBP10.35□□□□□ -0.75
ATM-224ENST00000534625 KCNH8Q96L42 1107 aa10.35□□□□□ -0.75
ATM-224ENST00000534625 CECR2Q9BXF3 1484 aa10.35□□□□□ -0.75
ATM-224ENST00000534625 ZNF454Q8N9F8 522 aa10.33□□□□□ -0.76
ATM-224ENST00000534625 SPRYD3Q8NCJ5 442 aa10.33□□□□□ -0.76
ATM-224ENST00000534625 EMILIN3Q9NT22 766 aa10.3□□□□□ -0.76
ATM-224ENST00000534625 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.3□□□□□ -0.76
ATM-224ENST00000534625 BCL2L12Q9HB09 334 aa10.29□□□□□ -0.76
ATM-224ENST00000534625 BHMG1C9JSJ3 638 aaPredicted RBP10.28□□□□□ -0.76
ATM-224ENST00000534625 PAXIP1Q6ZW49 1069 aaPredicted RBP10.27□□□□□ -0.77
ATM-224ENST00000534625 SLC4A5Q9BY07 1137 aa10.27□□□□□ -0.77
ATM-224ENST00000534625 FOSBP53539 338 aa10.26□□□□□ -0.77
ATM-224ENST00000534625 THSD4Q6ZMP0 1018 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms