RNA–Protein interactions for RNA: ENST00000534375.1

PICALM-222, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 2

Gene PICALM, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-222	ENST00000534375	STK24	Q9Y6E0	443 aa		7.94	□□□□□ -1.14
PICALM-222	ENST00000534375	MKRN3	Q13064	507 aa	Known RBP	7.93	□□□□□ -1.14
PICALM-222	ENST00000534375	CADPS2	Q86UW7	1296 aa		7.93	□□□□□ -1.14
PICALM-222	ENST00000534375	MMRN1	Q13201	1228 aa		7.92	□□□□□ -1.14
PICALM-222	ENST00000534375	LMOD2	Q6P5Q4	547 aa		7.92	□□□□□ -1.14
PICALM-222	ENST00000534375	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	7.92	□□□□□ -1.14
PICALM-222	ENST00000534375	P3H3	Q8IVL6	736 aa		7.91	□□□□□ -1.14
PICALM-222	ENST00000534375	BRPF1	P55201	1214 aa	Predicted RBP	7.9	□□□□□ -1.14
PICALM-222	ENST00000534375	HOMEZ	Q8IX15	550 aa		7.88	□□□□□ -1.15
PICALM-222	ENST00000534375	SPNS2	Q8IVW8	549 aa		7.86	□□□□□ -1.15
PICALM-222	ENST00000534375	RYDEN	Q9NUL5	291 aa	Known RBP	7.86	□□□□□ -1.15
PICALM-222	ENST00000534375	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	7.86	□□□□□ -1.15	1e-7	■■□□□ 13.9
PICALM-222	ENST00000534375	SLAIN1	Q8ND83	568 aa		7.85	□□□□□ -1.15
PICALM-222	ENST00000534375	L3MBTL3	Q96JM7	780 aa	Predicted RBP	7.85	□□□□□ -1.15
PICALM-222	ENST00000534375	CABP2	Q9NPB3	220 aa		7.85	□□□□□ -1.15
PICALM-222	ENST00000534375	PDCD7	Q8N8D1	485 aa	Known RBP	7.84	□□□□□ -1.15
PICALM-222	ENST00000534375	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	7.83	□□□□□ -1.16
PICALM-222	ENST00000534375	ILDR1	Q86SU0	546 aa	Predicted RBP	7.81	□□□□□ -1.16
PICALM-222	ENST00000534375	ZC3H15	Q8WU90	426 aa	Known RBP	7.8	□□□□□ -1.16
PICALM-222	ENST00000534375	WDR70	Q9NW82	654 aa		7.79	□□□□□ -1.16
PICALM-222	ENST00000534375	C3orf67	Q6ZVT6	689 aa		7.78	□□□□□ -1.16
PICALM-222	ENST00000534375		G3V3G9	751 aa		7.77	□□□□□ -1.17
PICALM-222	ENST00000534375	SUPT5H	O00267	1087 aa	Known RBP	7.77	□□□□□ -1.17
PICALM-222	ENST00000534375	SNPH	O15079	494 aa		7.76	□□□□□ -1.17
PICALM-222	ENST00000534375	ST18	O60284	1047 aa		7.76	□□□□□ -1.17
PICALM-222	ENST00000534375	NEUROD2	Q15784	382 aa		7.76	□□□□□ -1.17
PICALM-222	ENST00000534375	EFCAB3	Q8N7B9	438 aa		7.76	□□□□□ -1.17
PICALM-222	ENST00000534375	SLC24A3	Q9HC58	644 aa		7.76	□□□□□ -1.17
PICALM-222	ENST00000534375	DPY19L2	Q6NUT2	758 aa		7.75	□□□□□ -1.17
PICALM-222	ENST00000534375	MFRP	Q9BY79	579 aa		7.75	□□□□□ -1.17
PICALM-222	ENST00000534375	SOX12	O15370	315 aa		7.74	□□□□□ -1.17
PICALM-222	ENST00000534375	TESPA1	A2RU30	521 aa	Predicted RBP	7.73	□□□□□ -1.17
PICALM-222	ENST00000534375	SEMA3E	O15041	775 aa		7.73	□□□□□ -1.17
PICALM-222	ENST00000534375	ARHGEF1	Q92888	912 aa	Known RBP	7.73	□□□□□ -1.17
PICALM-222	ENST00000534375	BOLA1	Q9Y3E2	137 aa		7.73	□□□□□ -1.17
PICALM-222	ENST00000534375	PPP1R37	O75864	691 aa		7.71	□□□□□ -1.18
PICALM-222	ENST00000534375	E2F4	Q16254	413 aa		7.68	□□□□□ -1.18
PICALM-222	ENST00000534375	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	7.68	□□□□□ -1.18
PICALM-222	ENST00000534375	ZMYND10	O75800	440 aa		7.66	□□□□□ -1.18
PICALM-222	ENST00000534375	PHF8	Q9UPP1	1060 aa		7.66	□□□□□ -1.18
PICALM-222	ENST00000534375	NLRP6	P59044	892 aa		7.65	□□□□□ -1.18
PICALM-222	ENST00000534375	FBXO22	Q8NEZ5	403 aa		7.65	□□□□□ -1.18
PICALM-222	ENST00000534375	NCKAP5L	Q9HCH0	1330 aa		7.63	□□□□□ -1.19
PICALM-222	ENST00000534375	MICALL2	Q8IY33	904 aa		7.63	□□□□□ -1.19
PICALM-222	ENST00000534375	MS4A4A	Q96JQ5	239 aa		7.63	□□□□□ -1.19
PICALM-222	ENST00000534375	BARGIN	Q6ZT62	677 aa		7.61	□□□□□ -1.19
PICALM-222	ENST00000534375	GPBP1L1	Q9HC44	474 aa	Predicted RBP	7.61	□□□□□ -1.19
PICALM-222	ENST00000534375	UBTF	P17480	764 aa	Known RBP	7.6	□□□□□ -1.19
PICALM-222	ENST00000534375	DOK7	Q18PE1	504 aa		7.58	□□□□□ -1.2
PICALM-222	ENST00000534375	MARVELD3	Q96A59	401 aa		7.58	□□□□□ -1.2
PICALM-222	ENST00000534375	ZNF710	Q8N1W2	664 aa		7.57	□□□□□ -1.2
PICALM-222	ENST00000534375	PODXL2	Q9NZ53	605 aa		7.57	□□□□□ -1.2
PICALM-222	ENST00000534375	HOXB3	P14651	431 aa	Predicted RBP	7.56	□□□□□ -1.2
PICALM-222	ENST00000534375	EMP3	P54852	163 aa		7.56	□□□□□ -1.2
PICALM-222	ENST00000534375	MFSD10	Q14728	455 aa		7.56	□□□□□ -1.2
PICALM-222	ENST00000534375	LARP6	Q9BRS8	491 aa	Known RBP	7.56	□□□□□ -1.2
PICALM-222	ENST00000534375	RIMBP2	O15034	1052 aa		7.55	□□□□□ -1.2
PICALM-222	ENST00000534375	TMEM92	Q6UXU6	159 aa		7.55	□□□□□ -1.2
PICALM-222	ENST00000534375	ARIH1	Q9Y4X5	557 aa	Predicted RBP	7.55	□□□□□ -1.2
PICALM-222	ENST00000534375	RBM26	Q5T8P6	1007 aa	Known RBP	7.54	□□□□□ -1.2
PICALM-222	ENST00000534375	CRISPLD2	Q9H0B8	497 aa		7.54	□□□□□ -1.2
PICALM-222	ENST00000534375	HOXB1	P14653	301 aa	Predicted RBP	7.53	□□□□□ -1.2
PICALM-222	ENST00000534375	MLLT3	P42568	568 aa	Predicted RBP	7.53	□□□□□ -1.2
PICALM-222	ENST00000534375	IL27	Q8NEV9	243 aa		7.53	□□□□□ -1.2
PICALM-222	ENST00000534375	AK7	Q96M32	723 aa		7.53	□□□□□ -1.2
PICALM-222	ENST00000534375	KRTAP3-3	Q9BYR6	98 aa		7.53	□□□□□ -1.2
PICALM-222	ENST00000534375	KRTAP3-2	Q9BYR7	98 aa		7.53	□□□□□ -1.2
PICALM-222	ENST00000534375	CAMK2B	Q13554	666 aa		7.52	□□□□□ -1.21
PICALM-222	ENST00000534375	SMYD5	Q6GMV2	418 aa		7.52	□□□□□ -1.21
PICALM-222	ENST00000534375	ZMYND15	Q9H091	742 aa		7.52	□□□□□ -1.21
PICALM-222	ENST00000534375	KDM4C	Q9H3R0	1056 aa		7.52	□□□□□ -1.21
PICALM-222	ENST00000534375	FAM205C	A6NFA0	338 aa		7.51	□□□□□ -1.21
PICALM-222	ENST00000534375	ZSWIM6	Q9HCJ5	1215 aa		7.51	□□□□□ -1.21
PICALM-222	ENST00000534375	GPIHBP1	Q8IV16	184 aa		7.5	□□□□□ -1.21
PICALM-222	ENST00000534375	HS3ST6	Q96QI5	342 aa		7.5	□□□□□ -1.21
PICALM-222	ENST00000534375	C1orf115	Q9H7X2	142 aa		7.5	□□□□□ -1.21
PICALM-222	ENST00000534375	TRIM26	Q12899	539 aa	Predicted RBP	7.49	□□□□□ -1.21
PICALM-222	ENST00000534375	DDX27	Q96GQ7	796 aa	Known RBP	7.49	□□□□□ -1.21
PICALM-222	ENST00000534375	TRIM66	O15016	1216 aa		7.48	□□□□□ -1.21
PICALM-222	ENST00000534375	PDE4A	P27815	886 aa		7.48	□□□□□ -1.21
PICALM-222	ENST00000534375	RSPH6A	Q9H0K4	717 aa		7.48	□□□□□ -1.21
PICALM-222	ENST00000534375	PDE4D	Q08499	809 aa		7.47	□□□□□ -1.21
PICALM-222	ENST00000534375	ERBB3	P21860	1342 aa		7.47	□□□□□ -1.21
PICALM-222	ENST00000534375	POTEB3	A0JP26	581 aa		7.46	□□□□□ -1.22
PICALM-222	ENST00000534375	KIF3C	O14782	793 aa		7.46	□□□□□ -1.22
PICALM-222	ENST00000534375	POTEB	Q6S5H4	581 aa		7.46	□□□□□ -1.22
PICALM-222	ENST00000534375	C2orf72	A6NCS6	295 aa		7.45	□□□□□ -1.22
PICALM-222	ENST00000534375	GPR37	O15354	613 aa		7.45	□□□□□ -1.22
PICALM-222	ENST00000534375	HRC	P23327	699 aa		7.45	□□□□□ -1.22
PICALM-222	ENST00000534375	GPR153	Q6NV75	609 aa		7.45	□□□□□ -1.22
PICALM-222	ENST00000534375	KRI1	Q8N9T8	703 aa	Known RBP	7.45	□□□□□ -1.22
PICALM-222	ENST00000534375	TMC2	Q8TDI7	906 aa		7.44	□□□□□ -1.22
PICALM-222	ENST00000534375	FAM117A	Q9C073	453 aa		7.43	□□□□□ -1.22
PICALM-222	ENST00000534375	ARSI	Q5FYB1	569 aa		7.42	□□□□□ -1.22
PICALM-222	ENST00000534375	ARID3A	Q99856	593 aa		7.42	□□□□□ -1.22
PICALM-222	ENST00000534375	PLEKHG3	A1L390	1219 aa		7.4	□□□□□ -1.22
PICALM-222	ENST00000534375	VARS2	Q5ST30	1063 aa	Known RBP	7.4	□□□□□ -1.22
PICALM-222	ENST00000534375	EMILIN3	Q9NT22	766 aa		7.4	□□□□□ -1.22
PICALM-222	ENST00000534375	ARID3C	A6NKF2	412 aa		7.39	□□□□□ -1.23
PICALM-222	ENST00000534375	SLC34A2	O95436	690 aa		7.39	□□□□□ -1.23

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