RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.69□□□□□ -0.7
ATPAF1-211ENST00000534216 PLCB2Q00722 1185 aa10.67□□□□□ -0.7
ATPAF1-211ENST00000534216 TMEM92Q6UXU6 159 aa10.63□□□□□ -0.71
ATPAF1-211ENST00000534216 SLAIN1Q8ND83 568 aa10.63□□□□□ -0.71
ATPAF1-211ENST00000534216 CADPS2Q86UW7 1296 aa10.59□□□□□ -0.71
ATPAF1-211ENST00000534216 KIF3CO14782 793 aa10.57□□□□□ -0.72
ATPAF1-211ENST00000534216 C2orf72A6NCS6 295 aa10.56□□□□□ -0.72
ATPAF1-211ENST00000534216 TMC2Q8TDI7 906 aa10.56□□□□□ -0.72
ATPAF1-211ENST00000534216 TSHZ2Q9NRE2 1034 aa10.56□□□□□ -0.72
ATPAF1-211ENST00000534216 CRISPLD2Q9H0B8 497 aa10.55□□□□□ -0.72
ATPAF1-211ENST00000534216 NCKAP5LQ9HCH0 1330 aa10.55□□□□□ -0.72
ATPAF1-211ENST00000534216 GPHNQ9NQX3 736 aaPredicted RBP10.54□□□□□ -0.72
ATPAF1-211ENST00000534216 PDE4AP27815 886 aa10.52□□□□□ -0.73
ATPAF1-211ENST00000534216 HAP1P54257 671 aaPredicted RBP10.5□□□□□ -0.73
ATPAF1-211ENST00000534216 FOXK1P85037 733 aa10.49□□□□□ -0.73
ATPAF1-211ENST00000534216 DSG2Q14126 1118 aa10.49□□□□□ -0.73
ATPAF1-211ENST00000534216 LARP6Q9BRS8 491 aaKnown RBP10.49□□□□□ -0.73
ATPAF1-211ENST00000534216 MFSD10Q14728 455 aa10.47□□□□□ -0.73
ATPAF1-211ENST00000534216 SNPHO15079 494 aa10.46□□□□□ -0.73
ATPAF1-211ENST00000534216 HOXB3P14651 431 aaPredicted RBP10.45□□□□□ -0.74
ATPAF1-211ENST00000534216 PPP1R15BQ5SWA1 713 aa10.45□□□□□ -0.74
ATPAF1-211ENST00000534216 PLPP6Q8IY26 295 aa10.45□□□□□ -0.74
ATPAF1-211ENST00000534216 DDX27Q96GQ7 796 aaKnown RBP10.45□□□□□ -0.74
ATPAF1-211ENST00000534216 FAM163AQ96GL9 167 aaPredicted RBP10.44□□□□□ -0.74
ATPAF1-211ENST00000534216 DOK7Q18PE1 504 aa10.42□□□□□ -0.74
ATPAF1-211ENST00000534216 LCE2DQ5TA82 110 aaPredicted RBP10.42□□□□□ -0.74
ATPAF1-211ENST00000534216 SLC34A2O95436 690 aa10.38□□□□□ -0.75
ATPAF1-211ENST00000534216 WDR70Q9NW82 654 aa10.38□□□□□ -0.75
ATPAF1-211ENST00000534216 RIMBP2O15034 1052 aa10.37□□□□□ -0.75
ATPAF1-211ENST00000534216 CDAN1Q8IWY9 1227 aa10.36□□□□□ -0.75
ATPAF1-211ENST00000534216 ZNF710Q8N1W2 664 aa10.36□□□□□ -0.75
ATPAF1-211ENST00000534216 ST18O60284 1047 aa10.35□□□□□ -0.75
ATPAF1-211ENST00000534216 VSIG10Q8N0Z9 540 aa10.35□□□□□ -0.75
ATPAF1-211ENST00000534216 KDM2AQ9Y2K7 1162 aa10.35□□□□□ -0.75
ATPAF1-211ENST00000534216 CAMK2BQ13554 666 aa10.34□□□□□ -0.75
ATPAF1-211ENST00000534216 ZSWIM6Q9HCJ5 1215 aa10.34□□□□□ -0.75
ATPAF1-211ENST00000534216 PTCD2Q8WV60 388 aaKnown RBP10.33□□□□□ -0.76
ATPAF1-211ENST00000534216 E2F4Q16254 413 aa10.32□□□□□ -0.76
ATPAF1-211ENST00000534216 GPR153Q6NV75 609 aa10.32□□□□□ -0.76
ATPAF1-211ENST00000534216 OXER1Q8TDS5 423 aa10.32□□□□□ -0.76
ATPAF1-211ENST00000534216 EMILIN3Q9NT22 766 aa10.32□□□□□ -0.76
ATPAF1-211ENST00000534216 PCDHGA4Q9Y5G9 962 aa10.31□□□□□ -0.76
ATPAF1-211ENST00000534216 HOXB1P14653 301 aaPredicted RBP10.3□□□□□ -0.76
ATPAF1-211ENST00000534216 ARSIQ5FYB1 569 aa10.3□□□□□ -0.76
ATPAF1-211ENST00000534216 UPF1Q92900 1129 aaKnown RBP eCLIP10.3□□□□□ -0.76
ATPAF1-211ENST00000534216 TBC1D12O60347 775 aa10.27□□□□□ -0.77
ATPAF1-211ENST00000534216 KHSRPQ92945 711 aaKnown RBP eCLIP10.27□□□□□ -0.77
ATPAF1-211ENST00000534216 KDM4FA0A1W2PPD8 638 aa10.24□□□□□ -0.77
ATPAF1-211ENST00000534216 SLC24A1O60721 1099 aa10.24□□□□□ -0.77
ATPAF1-211ENST00000534216 NUDT7P0C024 238 aa10.24□□□□□ -0.77
ATPAF1-211ENST00000534216 MAP3K9P80192 1104 aa10.24□□□□□ -0.77
ATPAF1-211ENST00000534216 KCNV2Q8TDN2 545 aa10.24□□□□□ -0.77
ATPAF1-211ENST00000534216 MARVELD3Q96A59 401 aa10.24□□□□□ -0.77
ATPAF1-211ENST00000534216 DPYSL4O14531 572 aa10.23□□□□□ -0.77
ATPAF1-211ENST00000534216 MMRN1Q13201 1228 aa10.23□□□□□ -0.77
ATPAF1-211ENST00000534216 ARIH1Q9Y4X5 557 aaPredicted RBP10.23□□□□□ -0.77
ATPAF1-211ENST00000534216 EMP3P54852 163 aa10.21□□□□□ -0.77
ATPAF1-211ENST00000534216 P3H3Q8IVL6 736 aa10.21□□□□□ -0.77
ATPAF1-211ENST00000534216 EVI5O60447 810 aa10.2□□□□□ -0.78
ATPAF1-211ENST00000534216 ARHGEF1Q92888 912 aaKnown RBP10.19□□□□□ -0.78
ATPAF1-211ENST00000534216 ANO8Q9HCE9 1232 aaPredicted RBP10.18□□□□□ -0.78
ATPAF1-211ENST00000534216 ZNF316A6NFI3 1004 aaPredicted RBP10.17□□□□□ -0.78
ATPAF1-211ENST00000534216 ERBB3P21860 1342 aa10.16□□□□□ -0.78
ATPAF1-211ENST00000534216 PDIA6Q15084 440 aa10.16□□□□□ -0.78
ATPAF1-211ENST00000534216 LHX6Q9UPM6 363 aa10.16□□□□□ -0.78
ATPAF1-211ENST00000534216 FAM205CA6NFA0 338 aa10.15□□□□□ -0.78
ATPAF1-211ENST00000534216 SPDYE16A6NNV3 312 aaPredicted RBP10.15□□□□□ -0.78
ATPAF1-211ENST00000534216 VARS2Q5ST30 1063 aaKnown RBP10.13□□□□□ -0.79
ATPAF1-211ENST00000534216 POTEB3A0JP26 581 aa10.12□□□□□ -0.79
ATPAF1-211ENST00000534216 POTEBQ6S5H4 581 aa10.12□□□□□ -0.79
ATPAF1-211ENST00000534216 HS3ST6Q96QI5 342 aa10.12□□□□□ -0.79
ATPAF1-211ENST00000534216 SPNS2Q8IVW8 549 aa10.11□□□□□ -0.79
ATPAF1-211ENST00000534216 PTGER2P43116 358 aa10.1□□□□□ -0.79
ATPAF1-211ENST00000534216 PSDA5PKW4 1024 aaPredicted RBP10.09□□□□□ -0.79
ATPAF1-211ENST00000534216 FOSBP53539 338 aa10.09□□□□□ -0.79
ATPAF1-211ENST00000534216 JPH4Q96JJ6 628 aa10.08□□□□□ -0.8
ATPAF1-211ENST00000534216 ZNF454Q8N9F8 522 aa10.07□□□□□ -0.8
ATPAF1-211ENST00000534216 PPP4R3BQ5MIZ7 849 aa10.06□□□□□ -0.8
ATPAF1-211ENST00000534216 DDX12PQ92771 950 aa10.06□□□□□ -0.8
ATPAF1-211ENST00000534216 ZNF687Q8N1G0 1237 aa10.05□□□□□ -0.8
ATPAF1-211ENST00000534216 PCDHGA10Q9Y5H3 936 aa10.05□□□□□ -0.8
ATPAF1-211ENST00000534216 SEMA3EO15041 775 aa10.04□□□□□ -0.8
ATPAF1-211ENST00000534216 PHF14O94880 888 aa10.04□□□□□ -0.8
ATPAF1-211ENST00000534216 GRXCR2A6NFK2 248 aa10.02□□□□□ -0.81
ATPAF1-211ENST00000534216 TYW1BQ6NUM6 668 aa10.02□□□□□ -0.81
ATPAF1-211ENST00000534216 ZDHHC16Q969W1 377 aa10.02□□□□□ -0.81
ATPAF1-211ENST00000534216 EPAS1Q99814 870 aa10.02□□□□□ -0.81
ATPAF1-211ENST00000534216 MLLT3P42568 568 aaPredicted RBP10.01□□□□□ -0.81
ATPAF1-211ENST00000534216 NBR1Q14596 966 aa10□□□□□ -0.81
ATPAF1-211ENST00000534216 FBXW7Q969H0 707 aa10□□□□□ -0.81
ATPAF1-211ENST00000534216 ADAM33Q9BZ11 813 aa10□□□□□ -0.81
ATPAF1-211ENST00000534216 TESPA1A2RU30 521 aaPredicted RBP9.99□□□□□ -0.81
ATPAF1-211ENST00000534216 POTEEQ6S8J3 1075 aa9.99□□□□□ -0.81
ATPAF1-211ENST00000534216 BCL2L12Q9HB09 334 aa9.99□□□□□ -0.81
ATPAF1-211ENST00000534216 PBX2P40425 430 aa9.98□□□□□ -0.81
ATPAF1-211ENST00000534216 OSBPP22059 807 aa9.97□□□□□ -0.81
ATPAF1-211ENST00000534216 ARHGAP33O14559 1287 aa9.96□□□□□ -0.82
ATPAF1-211ENST00000534216 PRIM1P49642 420 aaKnown RBP9.96□□□□□ -0.82
ATPAF1-211ENST00000534216 KRTAP3-3Q9BYR6 98 aa9.96□□□□□ -0.82
ATPAF1-211ENST00000534216 KRTAP3-2Q9BYR7 98 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms