RNA–Protein interactions for RNA: ENST00000534018.5

GSDMD-215, Transcript of gasdermin D, humanhuman

TSL 5

Gene GSDMD, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-215ENST00000534018 YEATS2Q9ULM3 1422 aa27.39■■□□□ 1.97
GSDMD-215ENST00000534018 PLCH2O75038 1416 aa27.37■■□□□ 1.97
GSDMD-215ENST00000534018 POGZQ7Z3K3 1410 aa27.36■■□□□ 1.97
GSDMD-215ENST00000534018 FER1L4A9Z1Z3 1794 aa27.36■■□□□ 1.97
GSDMD-215ENST00000534018 MAGI2Q86UL8 1455 aa27.35■■□□□ 1.97
GSDMD-215ENST00000534018 LMTK3Q96Q04 1460 aa27.35■■□□□ 1.97
GSDMD-215ENST00000534018 SCAPERQ9BY12 1400 aa27.34■■□□□ 1.97
GSDMD-215ENST00000534018 PLPPR3Q6T4P5 718 aa27.28■■□□□ 1.96
GSDMD-215ENST00000534018 CDK11AQ9UQ88 783 aaPredicted RBP27.26■■□□□ 1.95
GSDMD-215ENST00000534018 ARHGAP5Q13017 1502 aa27.26■■□□□ 1.95
GSDMD-215ENST00000534018 TROQ12816 1431 aaPredicted RBP27.25■■□□□ 1.95
GSDMD-215ENST00000534018 MLECQ14165 292 aa27.24■■□□□ 1.95
GSDMD-215ENST00000534018 CDC42BPBQ9Y5S2 1711 aa27.24■■□□□ 1.95
GSDMD-215ENST00000534018 EFCAB2Q5VUJ9 269 aa27.23■■□□□ 1.95
GSDMD-215ENST00000534018 CLIP1P30622 1438 aa27.23■■□□□ 1.95
GSDMD-215ENST00000534018 ATP10AO60312 1499 aa27.21■■□□□ 1.95
GSDMD-215ENST00000534018 C9orf84Q5VXU9 1444 aa27.21■■□□□ 1.95
GSDMD-215ENST00000534018 ZNF518AQ6AHZ1 1483 aa27.19■■□□□ 1.94
GSDMD-215ENST00000534018 KDM5CP41229 1560 aa27.19■■□□□ 1.94
GSDMD-215ENST00000534018 ARHGEF12Q9NZN5 1544 aa27.18■■□□□ 1.94
GSDMD-215ENST00000534018 PREX2Q70Z35 1606 aa27.18■■□□□ 1.94
GSDMD-215ENST00000534018 HSPA2P54652 639 aa27.16■■□□□ 1.94
GSDMD-215ENST00000534018 FBXO41Q8TF61 875 aa27.16■■□□□ 1.94
GSDMD-215ENST00000534018 CCDC18Q5T9S5 1454 aa27.13■■□□□ 1.93
GSDMD-215ENST00000534018 PREX1Q8TCU6 1659 aa27.13■■□□□ 1.93
GSDMD-215ENST00000534018 DIP2CQ9Y2E4 1556 aa27.13■■□□□ 1.93
GSDMD-215ENST00000534018 ITSN2Q9NZM3 1697 aa27.12■■□□□ 1.93
GSDMD-215ENST00000534018 CDC42BPAQ5VT25 1732 aa27.12■■□□□ 1.93
GSDMD-215ENST00000534018 ABCA6Q8N139 1617 aa27.12■■□□□ 1.93
GSDMD-215ENST00000534018 CASKIN1Q8WXD9 1431 aa27.11■■□□□ 1.93
GSDMD-215ENST00000534018 AFAP1Q8N556 730 aa27.1■■□□□ 1.93
GSDMD-215ENST00000534018 ABCC1P33527 1531 aa27.1■■□□□ 1.93
GSDMD-215ENST00000534018 MYT1LQ9UL68 1186 aa27.07■■□□□ 1.92
GSDMD-215ENST00000534018 REREQ9P2R6 1566 aa27.05■■□□□ 1.92
GSDMD-215ENST00000534018 FYCO1Q9BQS8 1478 aa27.03■■□□□ 1.92
GSDMD-215ENST00000534018 MLH3Q9UHC1 1453 aa27.01■■□□□ 1.91
GSDMD-215ENST00000534018 TRAPPC8Q9Y2L5 1435 aa27.01■■□□□ 1.91
GSDMD-215ENST00000534018 CEBPAP49715 358 aaPredicted RBP27.01■■□□□ 1.91
GSDMD-215ENST00000534018 KIDINS220Q9ULH0 1771 aa27.01■■□□□ 1.91
GSDMD-215ENST00000534018 C3P01024 1663 aa27■■□□□ 1.91
GSDMD-215ENST00000534018 SAMD9LQ8IVG5 1584 aa26.96■■□□□ 1.91
GSDMD-215ENST00000534018 STRCQ7RTU9 1775 aa26.95■■□□□ 1.9
GSDMD-215ENST00000534018 AGLP35573 1532 aa26.94■■□□□ 1.9
GSDMD-215ENST00000534018 SETD1BQ9UPS6 1966 aaKnown RBP26.93■■□□□ 1.9
GSDMD-215ENST00000534018 SYCP2Q9BX26 1530 aa26.91■■□□□ 1.9
GSDMD-215ENST00000534018 UHRF1BP1Q6BDS2 1440 aa26.9■■□□□ 1.9
GSDMD-215ENST00000534018 ZNF777Q9ULD5 760 aaPredicted RBP26.88■■□□□ 1.89
GSDMD-215ENST00000534018 SUPT6HQ7KZ85 1726 aaKnown RBP26.87■■□□□ 1.89
GSDMD-215ENST00000534018 GPATCH8Q9UKJ3 1502 aaKnown RBP26.86■■□□□ 1.89
GSDMD-215ENST00000534018 CERKQ8TCT0 537 aa26.84■■□□□ 1.89
GSDMD-215ENST00000534018 ESF1Q9H501 851 aaKnown RBP26.83■■□□□ 1.89
GSDMD-215ENST00000534018 MROH2AA6NES4 1674 aa26.82■■□□□ 1.88
GSDMD-215ENST00000534018 ATP7AQ04656 1500 aa26.8■■□□□ 1.88
GSDMD-215ENST00000534018 INO80Q9ULG1 1556 aaPredicted RBP26.8■■□□□ 1.88
GSDMD-215ENST00000534018 CNTLNQ9NXG0 1405 aa26.77■■□□□ 1.88
GSDMD-215ENST00000534018 HNRNPMP52272 730 aaKnown RBP eCLIP26.77■■□□□ 1.88
GSDMD-215ENST00000534018 CLTCQ00610 1675 aaKnown RBP26.76■■□□□ 1.87
GSDMD-215ENST00000534018 CCNB3Q8WWL7 1395 aa26.76■■□□□ 1.87
GSDMD-215ENST00000534018 SPAG9O60271 1321 aaKnown RBP26.76■■□□□ 1.87
GSDMD-215ENST00000534018 MTUS2Q5JR59 1369 aa26.75■■□□□ 1.87
GSDMD-215ENST00000534018 PLXNC1O60486 1568 aa26.75■■□□□ 1.87
GSDMD-215ENST00000534018 PLEKHH2Q8IVE3 1493 aa26.74■■□□□ 1.87
GSDMD-215ENST00000534018 DMRT2Q9Y5R5 561 aa26.74■■□□□ 1.87
GSDMD-215ENST00000534018 TIAM1Q13009 1591 aa26.74■■□□□ 1.87
GSDMD-215ENST00000534018 CFDP1Q9UEE9 299 aaPredicted RBP26.73■■□□□ 1.87
GSDMD-215ENST00000534018 KIAA1107Q9UPP5 1409 aa26.73■■□□□ 1.87
GSDMD-215ENST00000534018 ADGBQ8N7X0 1667 aa26.72■■□□□ 1.87
GSDMD-215ENST00000534018 EHBP1L1Q8N3D4 1523 aa26.71■■□□□ 1.87
GSDMD-215ENST00000534018 A2MP01023 1474 aa26.68■■□□□ 1.86
GSDMD-215ENST00000534018 PTPRTO14522 1441 aa26.66■■□□□ 1.86
GSDMD-215ENST00000534018 MYO3AQ8NEV4 1616 aa26.66■■□□□ 1.86
GSDMD-215ENST00000534018 NPATQ14207 1427 aa26.65■■□□□ 1.86
GSDMD-215ENST00000534018 CAMSAP1Q5T5Y3 1602 aa26.65■■□□□ 1.86
GSDMD-215ENST00000534018 NCOA1Q15788 1441 aa26.65■■□□□ 1.86
GSDMD-215ENST00000534018 ZMYM3Q14202 1370 aa26.64■■□□□ 1.86
GSDMD-215ENST00000534018 ZNF142P52746 1687 aaPredicted RBP26.63■■□□□ 1.85
GSDMD-215ENST00000534018 CEP162Q5TB80 1403 aa26.62■■□□□ 1.85
GSDMD-215ENST00000534018 ZNF644Q9H582 1327 aaPredicted RBP26.62■■□□□ 1.85
GSDMD-215ENST00000534018 MBD5Q9P267 1494 aa26.59■■□□□ 1.85
GSDMD-215ENST00000534018 LTBP4Q8N2S1 1624 aa26.58■■□□□ 1.85
GSDMD-215ENST00000534018 GGT6Q6P531 493 aa26.57■■□□□ 1.84
GSDMD-215ENST00000534018 CEP170BQ9Y4F5 1589 aaPredicted RBP26.56■■□□□ 1.84
GSDMD-215ENST00000534018 PTPRKQ15262 1439 aa26.54■■□□□ 1.84
GSDMD-215ENST00000534018 NCOA2Q15596 1464 aa26.51■■□□□ 1.83
GSDMD-215ENST00000534018 CAMSAP2Q08AD1 1489 aa26.5■■□□□ 1.83
GSDMD-215ENST00000534018 RTEL1-TNFRSF6BF6WH68 1400 aa26.5■■□□□ 1.83
GSDMD-215ENST00000534018 CCDC141Q6ZP82 1450 aa26.49■■□□□ 1.83
GSDMD-215ENST00000534018 NCKAP5LQ9HCH0 1330 aa26.48■■□□□ 1.83
GSDMD-215ENST00000534018 PLA2R1Q13018 1463 aa26.47■■□□□ 1.83
GSDMD-215ENST00000534018 IQSEC2Q5JU85 1478 aa26.46■■□□□ 1.83
GSDMD-215ENST00000534018 DHX29Q7Z478 1369 aaKnown RBP26.45■■□□□ 1.82
GSDMD-215ENST00000534018 DNMT1P26358 1616 aaKnown RBP26.43■■□□□ 1.82
GSDMD-215ENST00000534018 PPP6R1Q9UPN7 881 aa26.43■■□□□ 1.82
GSDMD-215ENST00000534018 TCOF1Q13428 1488 aaKnown RBP26.42■■□□□ 1.82
GSDMD-215ENST00000534018 POLR1AO95602 1720 aaPredicted RBP26.42■■□□□ 1.82
GSDMD-215ENST00000534018 KDM5DQ9BY66 1539 aa26.41■■□□□ 1.82
GSDMD-215ENST00000534018 ARHGEF5Q12774 1597 aa26.41■■□□□ 1.82
GSDMD-215ENST00000534018 A2ML1A8K2U0 1454 aa26.4■■□□□ 1.82
GSDMD-215ENST00000534018 ZNF335Q9H4Z2 1342 aaPredicted RBP26.39■■□□□ 1.82
GSDMD-215ENST00000534018 KIF3BO15066 747 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms