RNA–Protein interactions for RNA: ENST00000533888.1

GSDMD-214, Transcript of gasdermin D, humanhuman

TSL 4

Gene GSDMD, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-214ENST00000533888 TROQ12816 1431 aaPredicted RBP25.85■■□□□ 1.73
GSDMD-214ENST00000533888 POGZQ7Z3K3 1410 aa25.85■■□□□ 1.73
GSDMD-214ENST00000533888 ILDR1Q86SU0 546 aaPredicted RBP25.83■■□□□ 1.73
GSDMD-214ENST00000533888 PCF11O94913 1555 aaKnown RBP25.82■■□□□ 1.72
GSDMD-214ENST00000533888 CDK11AQ9UQ88 783 aaPredicted RBP25.82■■□□□ 1.72
GSDMD-214ENST00000533888 RIMS1Q86UR5 1692 aaKnown RBP25.82■■□□□ 1.72
GSDMD-214ENST00000533888 MAGI2Q86UL8 1455 aa25.8■■□□□ 1.72
GSDMD-214ENST00000533888 EFCAB2Q5VUJ9 269 aa25.78■■□□□ 1.72
GSDMD-214ENST00000533888 CASKIN1Q8WXD9 1431 aa25.78■■□□□ 1.72
GSDMD-214ENST00000533888 CLIP1P30622 1438 aa25.75■■□□□ 1.71
GSDMD-214ENST00000533888 ARHGAP5Q13017 1502 aa25.74■■□□□ 1.71
GSDMD-214ENST00000533888 CDC42BPBQ9Y5S2 1711 aa25.74■■□□□ 1.71
GSDMD-214ENST00000533888 CCDC18Q5T9S5 1454 aa25.71■■□□□ 1.71
GSDMD-214ENST00000533888 LMTK3Q96Q04 1460 aa25.71■■□□□ 1.71
GSDMD-214ENST00000533888 MLECQ14165 292 aa25.7■■□□□ 1.7
GSDMD-214ENST00000533888 ATP10AO60312 1499 aa25.7■■□□□ 1.7
GSDMD-214ENST00000533888 KDM5CP41229 1560 aa25.69■■□□□ 1.7
GSDMD-214ENST00000533888 ZNF518AQ6AHZ1 1483 aa25.68■■□□□ 1.7
GSDMD-214ENST00000533888 PREX2Q70Z35 1606 aa25.68■■□□□ 1.7
GSDMD-214ENST00000533888 AFAP1Q8N556 730 aa25.68■■□□□ 1.7
GSDMD-214ENST00000533888 FER1L4A9Z1Z3 1794 aa25.67■■□□□ 1.7
GSDMD-214ENST00000533888 FYCO1Q9BQS8 1478 aa25.66■■□□□ 1.7
GSDMD-214ENST00000533888 C9orf84Q5VXU9 1444 aa25.66■■□□□ 1.7
GSDMD-214ENST00000533888 PLPPR3Q6T4P5 718 aa25.65■■□□□ 1.7
GSDMD-214ENST00000533888 ARHGEF12Q9NZN5 1544 aa25.64■■□□□ 1.7
GSDMD-214ENST00000533888 CDC42BPAQ5VT25 1732 aa25.63■■□□□ 1.69
GSDMD-214ENST00000533888 ABCC1P33527 1531 aa25.62■■□□□ 1.69
GSDMD-214ENST00000533888 DIP2CQ9Y2E4 1556 aa25.61■■□□□ 1.69
GSDMD-214ENST00000533888 TRAPPC8Q9Y2L5 1435 aa25.61■■□□□ 1.69
GSDMD-214ENST00000533888 ITSN2Q9NZM3 1697 aa25.59■■□□□ 1.69
GSDMD-214ENST00000533888 ABCA6Q8N139 1617 aa25.59■■□□□ 1.69
GSDMD-214ENST00000533888 HSPA2P54652 639 aa25.57■■□□□ 1.68
GSDMD-214ENST00000533888 MLH3Q9UHC1 1453 aa25.55■■□□□ 1.68
GSDMD-214ENST00000533888 REREQ9P2R6 1566 aa25.53■■□□□ 1.68
GSDMD-214ENST00000533888 MYT1LQ9UL68 1186 aa25.52■■□□□ 1.68
GSDMD-214ENST00000533888 GPATCH8Q9UKJ3 1502 aaKnown RBP25.51■■□□□ 1.67
GSDMD-214ENST00000533888 SAMD9LQ8IVG5 1584 aa25.51■■□□□ 1.67
GSDMD-214ENST00000533888 KIDINS220Q9ULH0 1771 aa25.51■■□□□ 1.67
GSDMD-214ENST00000533888 CEBPAP49715 358 aaPredicted RBP25.5■■□□□ 1.67
GSDMD-214ENST00000533888 ZNF777Q9ULD5 760 aaPredicted RBP25.46■■□□□ 1.67
GSDMD-214ENST00000533888 SYCP2Q9BX26 1530 aa25.46■■□□□ 1.67
GSDMD-214ENST00000533888 AGLP35573 1532 aa25.44■■□□□ 1.66
GSDMD-214ENST00000533888 PREX1Q8TCU6 1659 aa25.44■■□□□ 1.66
GSDMD-214ENST00000533888 HNRNPMP52272 730 aaKnown RBP eCLIP25.41■■□□□ 1.66
GSDMD-214ENST00000533888 FBXO41Q8TF61 875 aa25.4■■□□□ 1.66
GSDMD-214ENST00000533888 CEP162Q5TB80 1403 aa25.39■■□□□ 1.66
GSDMD-214ENST00000533888 MTUS2Q5JR59 1369 aa25.39■■□□□ 1.65
GSDMD-214ENST00000533888 C3P01024 1663 aa25.39■■□□□ 1.65
GSDMD-214ENST00000533888 CCNB3Q8WWL7 1395 aa25.37■■□□□ 1.65
GSDMD-214ENST00000533888 TIAM1Q13009 1591 aa25.36■■□□□ 1.65
GSDMD-214ENST00000533888 CFDP1Q9UEE9 299 aaPredicted RBP25.36■■□□□ 1.65
GSDMD-214ENST00000533888 KIAA1107Q9UPP5 1409 aa25.35■■□□□ 1.65
GSDMD-214ENST00000533888 SETD1BQ9UPS6 1966 aaKnown RBP25.34■■□□□ 1.65
GSDMD-214ENST00000533888 INO80Q9ULG1 1556 aaPredicted RBP25.34■■□□□ 1.65
GSDMD-214ENST00000533888 SPAG9O60271 1321 aaKnown RBP25.34■■□□□ 1.65
GSDMD-214ENST00000533888 ATP7AQ04656 1500 aa25.33■■□□□ 1.65
GSDMD-214ENST00000533888 EHBP1L1Q8N3D4 1523 aa25.33■■□□□ 1.65
GSDMD-214ENST00000533888 SUPT6HQ7KZ85 1726 aaKnown RBP25.32■■□□□ 1.64
GSDMD-214ENST00000533888 UHRF1BP1Q6BDS2 1440 aa25.31■■□□□ 1.64
GSDMD-214ENST00000533888 PLEKHH2Q8IVE3 1493 aa25.31■■□□□ 1.64
GSDMD-214ENST00000533888 ZNF644Q9H582 1327 aaPredicted RBP25.31■■□□□ 1.64
GSDMD-214ENST00000533888 STRCQ7RTU9 1775 aa25.31■■□□□ 1.64
GSDMD-214ENST00000533888 PLXNC1O60486 1568 aa25.28■■□□□ 1.64
GSDMD-214ENST00000533888 ESF1Q9H501 851 aaKnown RBP25.25■■□□□ 1.63
GSDMD-214ENST00000533888 CNTLNQ9NXG0 1405 aa25.25■■□□□ 1.63
GSDMD-214ENST00000533888 MBD5Q9P267 1494 aa25.25■■□□□ 1.63
GSDMD-214ENST00000533888 A2MP01023 1474 aa25.24■■□□□ 1.63
GSDMD-214ENST00000533888 MROH2AA6NES4 1674 aa25.23■■□□□ 1.63
GSDMD-214ENST00000533888 LOC105371045A0A1W2PR82 267 aa25.21■■□□□ 1.63
GSDMD-214ENST00000533888 NCOA2Q15596 1464 aa25.2■■□□□ 1.62
GSDMD-214ENST00000533888 CLTCQ00610 1675 aaKnown RBP25.2■■□□□ 1.62
GSDMD-214ENST00000533888 CERKQ8TCT0 537 aa25.19■■□□□ 1.62
GSDMD-214ENST00000533888 ADGBQ8N7X0 1667 aa25.18■■□□□ 1.62
GSDMD-214ENST00000533888 ZMYM3Q14202 1370 aa25.18■■□□□ 1.62
GSDMD-214ENST00000533888 NPATQ14207 1427 aa25.14■■□□□ 1.62
GSDMD-214ENST00000533888 CAMSAP2Q08AD1 1489 aa25.14■■□□□ 1.61
GSDMD-214ENST00000533888 GGT6Q6P531 493 aa25.13■■□□□ 1.61
GSDMD-214ENST00000533888 RTEL1-TNFRSF6BF6WH68 1400 aa25.12■■□□□ 1.61
GSDMD-214ENST00000533888 VPS8Q8N3P4 1428 aa25.12■■□□□ 1.61
GSDMD-214ENST00000533888 DMRT2Q9Y5R5 561 aa25.11■■□□□ 1.61
GSDMD-214ENST00000533888 PTPRTO14522 1441 aa25.1■■□□□ 1.61
GSDMD-214ENST00000533888 NCOA1Q15788 1441 aa25.1■■□□□ 1.61
GSDMD-214ENST00000533888 CCDC141Q6ZP82 1450 aa25.09■■□□□ 1.61
GSDMD-214ENST00000533888 PTPRKQ15262 1439 aa25.09■■□□□ 1.61
GSDMD-214ENST00000533888 LRRC9Q6ZRR7 1453 aa25.08■■□□□ 1.6
GSDMD-214ENST00000533888 DHX29Q7Z478 1369 aaKnown RBP25.07■■□□□ 1.6
GSDMD-214ENST00000533888 CAMSAP1Q5T5Y3 1602 aa25.07■■□□□ 1.6
GSDMD-214ENST00000533888 MYO3AQ8NEV4 1616 aa25.06■■□□□ 1.6
GSDMD-214ENST00000533888 ZNF142P52746 1687 aaPredicted RBP25.04■■□□□ 1.6
GSDMD-214ENST00000533888 ARHGEF5Q12774 1597 aa25.03■■□□□ 1.6
GSDMD-214ENST00000533888 KANK4Q5T7N3 995 aaPredicted RBP25.02■■□□□ 1.6
GSDMD-214ENST00000533888 PPP6R1Q9UPN7 881 aa25.01■■□□□ 1.59
GSDMD-214ENST00000533888 CEP170BQ9Y4F5 1589 aaPredicted RBP25.01■■□□□ 1.59
GSDMD-214ENST00000533888 LTBP4Q8N2S1 1624 aa25.01■■□□□ 1.59
GSDMD-214ENST00000533888 NCKAP5LQ9HCH0 1330 aa24.99■■□□□ 1.59
GSDMD-214ENST00000533888 KIF3BO15066 747 aa24.98■■□□□ 1.59
GSDMD-214ENST00000533888 RSPH4AQ5TD94 716 aa24.97■■□□□ 1.59
GSDMD-214ENST00000533888 MAP3K1Q13233 1512 aa24.96■■□□□ 1.59
GSDMD-214ENST00000533888 KDM5DQ9BY66 1539 aa24.94■■□□□ 1.58
GSDMD-214ENST00000533888 FBXO31Q5XUX0 539 aaPredicted RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 186.7 ms