RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 CCDC18Q5T9S5 1454 aa28.39■■■□□ 2.13
VPS51-213ENST00000533827 POGZQ7Z3K3 1410 aa28.38■■■□□ 2.13
VPS51-213ENST00000533827 MAGI2Q86UL8 1455 aa28.38■■■□□ 2.13
VPS51-213ENST00000533827 ZFYVE16Q7Z3T8 1539 aa28.37■■■□□ 2.13
VPS51-213ENST00000533827 ARID4BQ4LE39 1312 aaPredicted RBP28.37■■■□□ 2.13
VPS51-213ENST00000533827 PTPRMP28827 1452 aa28.36■■■□□ 2.13
VPS51-213ENST00000533827 YEATS2Q9ULM3 1422 aa28.35■■■□□ 2.13
VPS51-213ENST00000533827 FYCO1Q9BQS8 1478 aa28.34■■■□□ 2.13
VPS51-213ENST00000533827 MADDQ8WXG6 1647 aa28.32■■■□□ 2.12
VPS51-213ENST00000533827 ARHGAP5Q13017 1502 aa28.32■■■□□ 2.12
VPS51-213ENST00000533827 SIGLEC1Q9BZZ2 1709 aa28.3■■■□□ 2.12
VPS51-213ENST00000533827 CDC42BPBQ9Y5S2 1711 aa28.29■■■□□ 2.12
VPS51-213ENST00000533827 PREX2Q70Z35 1606 aa28.25■■■□□ 2.11
VPS51-213ENST00000533827 ZNF518AQ6AHZ1 1483 aa28.24■■■□□ 2.11
VPS51-213ENST00000533827 KDM5CP41229 1560 aa28.22■■■□□ 2.11
VPS51-213ENST00000533827 RIMS1Q86UR5 1692 aaKnown RBP28.22■■■□□ 2.11
VPS51-213ENST00000533827 ATP10AO60312 1499 aa28.21■■■□□ 2.11
VPS51-213ENST00000533827 AFAP1Q8N556 730 aa28.2■■■□□ 2.1
VPS51-213ENST00000533827 C9orf84Q5VXU9 1444 aa28.18■■■□□ 2.1
VPS51-213ENST00000533827 CDC42BPAQ5VT25 1732 aa28.18■■■□□ 2.1
VPS51-213ENST00000533827 ABCC1P33527 1531 aa28.16■■■□□ 2.1
VPS51-213ENST00000533827 ARHGEF12Q9NZN5 1544 aa28.15■■■□□ 2.1
VPS51-213ENST00000533827 ITSN2Q9NZM3 1697 aa28.13■■■□□ 2.09
VPS51-213ENST00000533827 MLECQ14165 292 aa28.12■■■□□ 2.09
VPS51-213ENST00000533827 TRAPPC8Q9Y2L5 1435 aa28.11■■■□□ 2.09
VPS51-213ENST00000533827 MLH3Q9UHC1 1453 aa28.11■■■□□ 2.09
VPS51-213ENST00000533827 FER1L4A9Z1Z3 1794 aa28.1■■■□□ 2.09
VPS51-213ENST00000533827 DIP2CQ9Y2E4 1556 aa28.1■■■□□ 2.09
VPS51-213ENST00000533827 CEP162Q5TB80 1403 aa28.09■■■□□ 2.09
VPS51-213ENST00000533827 GPATCH8Q9UKJ3 1502 aaKnown RBP28.08■■■□□ 2.09
VPS51-213ENST00000533827 LMTK3Q96Q04 1460 aa28.07■■■□□ 2.08
VPS51-213ENST00000533827 REREQ9P2R6 1566 aa28.07■■■□□ 2.08
VPS51-213ENST00000533827 ABCA6Q8N139 1617 aa28.07■■■□□ 2.08
VPS51-213ENST00000533827 MYT1LQ9UL68 1186 aa28.06■■■□□ 2.08
VPS51-213ENST00000533827 SAMD9LQ8IVG5 1584 aa28.05■■■□□ 2.08
VPS51-213ENST00000533827 MTUS2Q5JR59 1369 aa28.03■■■□□ 2.08
VPS51-213ENST00000533827 PLPPR3Q6T4P5 718 aa28.01■■■□□ 2.07
VPS51-213ENST00000533827 ZNF777Q9ULD5 760 aaPredicted RBP28.01■■■□□ 2.07
VPS51-213ENST00000533827 KIDINS220Q9ULH0 1771 aa28.01■■■□□ 2.07
VPS51-213ENST00000533827 SYCP2Q9BX26 1530 aa27.98■■■□□ 2.07
VPS51-213ENST00000533827 CCNB3Q8WWL7 1395 aa27.98■■■□□ 2.07
VPS51-213ENST00000533827 ILDR1Q86SU0 546 aaPredicted RBP27.97■■■□□ 2.07
VPS51-213ENST00000533827 AGLP35573 1532 aa27.97■■■□□ 2.07
VPS51-213ENST00000533827 EHBP1L1Q8N3D4 1523 aa27.97■■■□□ 2.07
VPS51-213ENST00000533827 CFDP1Q9UEE9 299 aaPredicted RBP27.96■■■□□ 2.07
VPS51-213ENST00000533827 KIAA1107Q9UPP5 1409 aa27.95■■■□□ 2.07
VPS51-213ENST00000533827 HNRNPMP52272 730 aaKnown RBP eCLIP27.94■■■□□ 2.06
VPS51-213ENST00000533827 PLEKHH2Q8IVE3 1493 aa27.93■■■□□ 2.06
VPS51-213ENST00000533827 TIAM1Q13009 1591 aa27.92■■■□□ 2.06
VPS51-213ENST00000533827 LOC105371045A0A1W2PR82 267 aa27.9■■■□□ 2.06
VPS51-213ENST00000533827 SPAG9O60271 1321 aaKnown RBP27.9■■■□□ 2.06
VPS51-213ENST00000533827 CEBPAP49715 358 aaPredicted RBP27.89■■■□□ 2.06
VPS51-213ENST00000533827 HSPA2P54652 639 aa27.89■■■□□ 2.06
VPS51-213ENST00000533827 ATP7AQ04656 1500 aa27.86■■■□□ 2.05
VPS51-213ENST00000533827 INO80Q9ULG1 1556 aaPredicted RBP27.85■■■□□ 2.05
VPS51-213ENST00000533827 PREX1Q8TCU6 1659 aa27.84■■■□□ 2.05
VPS51-213ENST00000533827 ZNF644Q9H582 1327 aaPredicted RBP27.83■■■□□ 2.05
VPS51-213ENST00000533827 C3P01024 1663 aa27.81■■■□□ 2.04
VPS51-213ENST00000533827 MBD5Q9P267 1494 aa27.81■■■□□ 2.04
VPS51-213ENST00000533827 VPS8Q8N3P4 1428 aa27.8■■■□□ 2.04
VPS51-213ENST00000533827 NCOA2Q15596 1464 aa27.8■■■□□ 2.04
VPS51-213ENST00000533827 SUPT6HQ7KZ85 1726 aaKnown RBP27.8■■■□□ 2.04
VPS51-213ENST00000533827 ESF1Q9H501 851 aaKnown RBP27.78■■■□□ 2.04
VPS51-213ENST00000533827 PLXNC1O60486 1568 aa27.77■■■□□ 2.04
VPS51-213ENST00000533827 CNTLNQ9NXG0 1405 aa27.76■■■□□ 2.04
VPS51-213ENST00000533827 A2MP01023 1474 aa27.76■■■□□ 2.03
VPS51-213ENST00000533827 SETD1BQ9UPS6 1966 aaKnown RBP27.74■■■□□ 2.03
VPS51-213ENST00000533827 UHRF1BP1Q6BDS2 1440 aa27.74■■■□□ 2.03
VPS51-213ENST00000533827 ADGBQ8N7X0 1667 aa27.72■■■□□ 2.03
VPS51-213ENST00000533827 RTEL1-TNFRSF6BF6WH68 1400 aa27.71■■■□□ 2.03
VPS51-213ENST00000533827 MROH2AA6NES4 1674 aa27.71■■■□□ 2.03
VPS51-213ENST00000533827 LRRC9Q6ZRR7 1453 aa27.7■■■□□ 2.03
VPS51-213ENST00000533827 CAMSAP2Q08AD1 1489 aa27.69■■■□□ 2.02
VPS51-213ENST00000533827 MAP3K1Q13233 1512 aa27.67■■■□□ 2.02
VPS51-213ENST00000533827 FBXO41Q8TF61 875 aa27.66■■■□□ 2.02
VPS51-213ENST00000533827 CCDC141Q6ZP82 1450 aa27.65■■■□□ 2.02
VPS51-213ENST00000533827 ZMYM3Q14202 1370 aa27.65■■■□□ 2.02
VPS51-213ENST00000533827 RSPH4AQ5TD94 716 aa27.64■■■□□ 2.02
VPS51-213ENST00000533827 STRCQ7RTU9 1775 aa27.63■■■□□ 2.01
VPS51-213ENST00000533827 CLTCQ00610 1675 aaKnown RBP27.63■■■□□ 2.01
VPS51-213ENST00000533827 NPATQ14207 1427 aa27.61■■■□□ 2.01
VPS51-213ENST00000533827 GGT6Q6P531 493 aa27.61■■■□□ 2.01
VPS51-213ENST00000533827 DHX29Q7Z478 1369 aaKnown RBP27.6■■■□□ 2.01
VPS51-213ENST00000533827 ARHGEF5Q12774 1597 aa27.6■■■□□ 2.01
VPS51-213ENST00000533827 KANK4Q5T7N3 995 aaPredicted RBP27.6■■■□□ 2.01
VPS51-213ENST00000533827 PPP6R1Q9UPN7 881 aa27.59■■■□□ 2.01
VPS51-213ENST00000533827 DMRT2Q9Y5R5 561 aa27.55■■■□□ 2
VPS51-213ENST00000533827 PTPRKQ15262 1439 aa27.51■■□□□ 1.99
VPS51-213ENST00000533827 TSPY4P0CV99 314 aa27.51■■□□□ 1.99
VPS51-213ENST00000533827 TSPY10P0CW01 314 aa27.51■■□□□ 1.99
VPS51-213ENST00000533827 MIA2Q96PC5 1412 aa27.5■■□□□ 1.99
VPS51-213ENST00000533827 MYOM3Q5VTT5 1437 aa27.5■■□□□ 1.99
VPS51-213ENST00000533827 KIF3BO15066 747 aa27.49■■□□□ 1.99
VPS51-213ENST00000533827 CERKQ8TCT0 537 aa27.49■■□□□ 1.99
VPS51-213ENST00000533827 PTPRTO14522 1441 aa27.48■■□□□ 1.99
VPS51-213ENST00000533827 NCOA1Q15788 1441 aa27.48■■□□□ 1.99
VPS51-213ENST00000533827 MAST1Q9Y2H9 1570 aa27.48■■□□□ 1.99
VPS51-213ENST00000533827 MYO3AQ8NEV4 1616 aa27.47■■□□□ 1.99
VPS51-213ENST00000533827 ZNF142P52746 1687 aaPredicted RBP27.46■■□□□ 1.99
VPS51-213ENST00000533827 CAMSAP1Q5T5Y3 1602 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms