RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 RICTORQ6R327 1708 aa25.09■■□□□ 1.61
TSKU-204ENST00000533752 TIAM1Q13009 1591 aa25.08■■□□□ 1.61
TSKU-204ENST00000533752 SCAPERQ9BY12 1400 aa25.07■■□□□ 1.6
TSKU-204ENST00000533752 ZMYM4Q5VZL5 1548 aa25.07■■□□□ 1.6
TSKU-204ENST00000533752 CDC42BPBQ9Y5S2 1711 aa25.06■■□□□ 1.6
TSKU-204ENST00000533752 POGZQ7Z3K3 1410 aa25.06■■□□□ 1.6
TSKU-204ENST00000533752 CDC42BPAQ5VT25 1732 aa25.05■■□□□ 1.6
TSKU-204ENST00000533752 MAP3K1Q13233 1512 aa25.04■■□□□ 1.6
TSKU-204ENST00000533752 CCNB3Q8WWL7 1395 aa25.03■■□□□ 1.6
TSKU-204ENST00000533752 GPATCH8Q9UKJ3 1502 aaKnown RBP25.02■■□□□ 1.6
TSKU-204ENST00000533752 MAGI2Q86UL8 1455 aa25.02■■□□□ 1.6
TSKU-204ENST00000533752 ARHGEF40Q8TER5 1519 aa25.02■■□□□ 1.6
TSKU-204ENST00000533752 ZNF518AQ6AHZ1 1483 aa25.01■■□□□ 1.59
TSKU-204ENST00000533752 AEBP2Q6ZN18 517 aaPredicted RBP25■■□□□ 1.59
TSKU-204ENST00000533752 ABCC1P33527 1531 aa25■■□□□ 1.59
TSKU-204ENST00000533752 SUPT6HQ7KZ85 1726 aaKnown RBP24.98■■□□□ 1.59
TSKU-204ENST00000533752 LRRC9Q6ZRR7 1453 aa24.97■■□□□ 1.59
TSKU-204ENST00000533752 ITSN2Q9NZM3 1697 aa24.97■■□□□ 1.59
TSKU-204ENST00000533752 ZFYVE16Q7Z3T8 1539 aa24.96■■□□□ 1.59
TSKU-204ENST00000533752 PLEKHH2Q8IVE3 1493 aa24.95■■□□□ 1.58
TSKU-204ENST00000533752 KDM5CP41229 1560 aa24.94■■□□□ 1.58
TSKU-204ENST00000533752 CFDP1Q9UEE9 299 aaPredicted RBP24.94■■□□□ 1.58
TSKU-204ENST00000533752 NCOA2Q15596 1464 aa24.94■■□□□ 1.58
TSKU-204ENST00000533752 KDM4FA0A1W2PPD8 638 aa24.93■■□□□ 1.58
TSKU-204ENST00000533752 APLP2Q06481 763 aa24.93■■□□□ 1.58
TSKU-204ENST00000533752 SAMD9LQ8IVG5 1584 aa24.92■■□□□ 1.58
TSKU-204ENST00000533752 KIAA1107Q9UPP5 1409 aa24.9■■□□□ 1.58
TSKU-204ENST00000533752 HECW2Q9P2P5 1572 aa24.89■■□□□ 1.58
TSKU-204ENST00000533752 ZNF777Q9ULD5 760 aaPredicted RBP24.89■■□□□ 1.58
TSKU-204ENST00000533752 ARHGEF12Q9NZN5 1544 aa24.89■■□□□ 1.57
TSKU-204ENST00000533752 YEATS2Q9ULM3 1422 aa24.88■■□□□ 1.57
TSKU-204ENST00000533752 SYCP2Q9BX26 1530 aa24.87■■□□□ 1.57
TSKU-204ENST00000533752 TRAPPC8Q9Y2L5 1435 aa24.86■■□□□ 1.57
TSKU-204ENST00000533752 AFAP1Q8N556 730 aa24.86■■□□□ 1.57
TSKU-204ENST00000533752 MLH3Q9UHC1 1453 aa24.85■■□□□ 1.57
TSKU-204ENST00000533752 ATP10AO60312 1499 aa24.83■■□□□ 1.56
TSKU-204ENST00000533752 KANK4Q5T7N3 995 aaPredicted RBP24.82■■□□□ 1.56
TSKU-204ENST00000533752 C9orf84Q5VXU9 1444 aa24.82■■□□□ 1.56
TSKU-204ENST00000533752 ARID4BQ4LE39 1312 aaPredicted RBP24.82■■□□□ 1.56
TSKU-204ENST00000533752 MYT1LQ9UL68 1186 aa24.8■■□□□ 1.56
TSKU-204ENST00000533752 BCORL1Q5H9F3 1711 aa24.78■■□□□ 1.56
TSKU-204ENST00000533752 REREQ9P2R6 1566 aa24.77■■□□□ 1.56
TSKU-204ENST00000533752 DIP2CQ9Y2E4 1556 aa24.77■■□□□ 1.56
TSKU-204ENST00000533752 HNRNPMP52272 730 aaKnown RBP eCLIP24.77■■□□□ 1.563e-6■■■■□ 20.5
TSKU-204ENST00000533752 CAMSAP2Q08AD1 1489 aa24.77■■□□□ 1.56
TSKU-204ENST00000533752 ADAMTSL3P82987 1691 aa24.75■■□□□ 1.55
TSKU-204ENST00000533752 SPAG9O60271 1321 aaKnown RBP24.75■■□□□ 1.55
TSKU-204ENST00000533752 MYOM3Q5VTT5 1437 aa24.75■■□□□ 1.55
TSKU-204ENST00000533752 ABCA6Q8N139 1617 aa24.75■■□□□ 1.55
TSKU-204ENST00000533752 ZNF644Q9H582 1327 aaPredicted RBP24.74■■□□□ 1.55
TSKU-204ENST00000533752 MIA2Q96PC5 1412 aa24.74■■□□□ 1.55
TSKU-204ENST00000533752 MBD5Q9P267 1494 aa24.74■■□□□ 1.55
TSKU-204ENST00000533752 KIDINS220Q9ULH0 1771 aa24.74■■□□□ 1.55
TSKU-204ENST00000533752 ATP7AQ04656 1500 aa24.72■■□□□ 1.55
TSKU-204ENST00000533752 INO80Q9ULG1 1556 aaPredicted RBP24.71■■□□□ 1.55
TSKU-204ENST00000533752 CCDC141Q6ZP82 1450 aa24.7■■□□□ 1.55
TSKU-204ENST00000533752 SIGLEC1Q9BZZ2 1709 aa24.7■■□□□ 1.54
TSKU-204ENST00000533752 RSPH4AQ5TD94 716 aa24.7■■□□□ 1.54
TSKU-204ENST00000533752 ARHGEF5Q12774 1597 aa24.68■■□□□ 1.54
TSKU-204ENST00000533752 MADDQ8WXG6 1647 aa24.68■■□□□ 1.54
TSKU-204ENST00000533752 AGLP35573 1532 aa24.67■■□□□ 1.54
TSKU-204ENST00000533752 RTEL1-TNFRSF6BF6WH68 1400 aa24.66■■□□□ 1.54
TSKU-204ENST00000533752 PTPRMP28827 1452 aa24.64■■□□□ 1.53
TSKU-204ENST00000533752 MLECQ14165 292 aa24.6■■□□□ 1.53
TSKU-204ENST00000533752 FGD6Q6ZV73 1430 aa24.6■■□□□ 1.53
TSKU-204ENST00000533752 ADGBQ8N7X0 1667 aa24.59■■□□□ 1.53
TSKU-204ENST00000533752 PLXNC1O60486 1568 aa24.59■■□□□ 1.53
TSKU-204ENST00000533752 A2MP01023 1474 aa24.59■■□□□ 1.53
TSKU-204ENST00000533752 FER1L4A9Z1Z3 1794 aa24.59■■□□□ 1.53
TSKU-204ENST00000533752 RIMS1Q86UR5 1692 aaKnown RBP24.59■■□□□ 1.53
TSKU-204ENST00000533752 PTPN23Q9H3S7 1636 aa24.58■■□□□ 1.53
TSKU-204ENST00000533752 TSPY4P0CV99 314 aa24.57■■□□□ 1.52
TSKU-204ENST00000533752 TSPY10P0CW01 314 aa24.57■■□□□ 1.52
TSKU-204ENST00000533752 TCOF1Q13428 1488 aaKnown RBP24.55■■□□□ 1.52
TSKU-204ENST00000533752 MAST1Q9Y2H9 1570 aa24.54■■□□□ 1.52
TSKU-204ENST00000533752 SHANK2Q9UPX8 1470 aa24.51■■□□□ 1.51
TSKU-204ENST00000533752 DHX29Q7Z478 1369 aaKnown RBP24.49■■□□□ 1.51
TSKU-204ENST00000533752 CNTLNQ9NXG0 1405 aa24.49■■□□□ 1.51
TSKU-204ENST00000533752 ESF1Q9H501 851 aaKnown RBP24.48■■□□□ 1.51
TSKU-204ENST00000533752 CROCC2H7BZ55 1655 aa24.46■■□□□ 1.51
TSKU-204ENST00000533752 DNMT1P26358 1616 aaKnown RBP24.46■■□□□ 1.51
TSKU-204ENST00000533752 ABCC5O15440 1437 aa24.44■■□□□ 1.5
TSKU-204ENST00000533752 DAPK1P53355 1430 aa24.44■■□□□ 1.5
TSKU-204ENST00000533752 PPP6R1Q9UPN7 881 aa24.42■■□□□ 1.5
TSKU-204ENST00000533752 MROH2AA6NES4 1674 aa24.39■■□□□ 1.49
TSKU-204ENST00000533752 FAM135AQ9P2D6 1515 aa24.39■■□□□ 1.49
TSKU-204ENST00000533752 FAM50AQ14320 339 aaKnown RBP24.38■■□□□ 1.49
TSKU-204ENST00000533752 DUOX2Q9NRD8 1548 aa24.37■■□□□ 1.49
TSKU-204ENST00000533752 GGT6Q6P531 493 aa24.37■■□□□ 1.49
TSKU-204ENST00000533752 EIF2AK4Q9P2K8 1649 aaKnown RBP24.36■■□□□ 1.49
TSKU-204ENST00000533752 KIF3BO15066 747 aa24.36■■□□□ 1.49
TSKU-204ENST00000533752 PLPPR3Q6T4P5 718 aa24.36■■□□□ 1.49
TSKU-204ENST00000533752 KIF15Q9NS87 1388 aa24.36■■□□□ 1.49
TSKU-204ENST00000533752 C3P01024 1663 aa24.34■■□□□ 1.49
TSKU-204ENST00000533752 ANKRD30AQ9BXX3 1397 aa24.34■■□□□ 1.49
TSKU-204ENST00000533752 ERBINQ96RT1 1412 aa24.32■■□□□ 1.48
TSKU-204ENST00000533752 LMTK3Q96Q04 1460 aa24.32■■□□□ 1.48
TSKU-204ENST00000533752 RNF17Q9BXT8 1623 aaKnown RBP24.32■■□□□ 1.48
TSKU-204ENST00000533752 KDM5DQ9BY66 1539 aa24.31■■□□□ 1.48
TSKU-204ENST00000533752 CLTCQ00610 1675 aaKnown RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms