RNA–Protein interactions for RNA: ENST00000533685.1

SYVN1-215, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-215ENST00000533685 CFDP1Q9UEE9 299 aaPredicted RBP19■□□□□ 0.63
SYVN1-215ENST00000533685 TCOF1Q13428 1488 aaKnown RBP18.99■□□□□ 0.63
SYVN1-215ENST00000533685 KIF13AQ9H1H9 1805 aa18.98■□□□□ 0.63
SYVN1-215ENST00000533685 EFCAB2Q5VUJ9 269 aa18.98■□□□□ 0.63
SYVN1-215ENST00000533685 CFAP74Q9C0B2 1584 aa18.98■□□□□ 0.63
SYVN1-215ENST00000533685 PLEKHH2Q8IVE3 1493 aa18.97■□□□□ 0.63
SYVN1-215ENST00000533685 TEX14Q8IWB6 1497 aa18.97■□□□□ 0.63
SYVN1-215ENST00000533685 NEO1Q92859 1461 aa18.97■□□□□ 0.63
SYVN1-215ENST00000533685 ARHGAP5Q13017 1502 aa18.97■□□□□ 0.63
SYVN1-215ENST00000533685 CDC42BPBQ9Y5S2 1711 aa18.97■□□□□ 0.63
SYVN1-215ENST00000533685 KIAA1107Q9UPP5 1409 aa18.96■□□□□ 0.63
SYVN1-215ENST00000533685 FANCAO15360 1455 aa18.96■□□□□ 0.63
SYVN1-215ENST00000533685 PTPN23Q9H3S7 1636 aa18.93■□□□□ 0.62
SYVN1-215ENST00000533685 CAMSAP2Q08AD1 1489 aa18.92■□□□□ 0.62
SYVN1-215ENST00000533685 RSPH4AQ5TD94 716 aa18.91■□□□□ 0.62
SYVN1-215ENST00000533685 SAMD9LQ8IVG5 1584 aa18.9■□□□□ 0.62
SYVN1-215ENST00000533685 ABCC1P33527 1531 aa18.9■□□□□ 0.62
SYVN1-215ENST00000533685 PPRC1Q5VV67 1664 aaKnown RBP18.89■□□□□ 0.61
SYVN1-215ENST00000533685 AKNAQ7Z591 1439 aa18.89■□□□□ 0.61
SYVN1-215ENST00000533685 ARHGEF5Q12774 1597 aa18.88■□□□□ 0.61
SYVN1-215ENST00000533685 MBD5Q9P267 1494 aa18.87■□□□□ 0.61
SYVN1-215ENST00000533685 ADGRL1O94910 1474 aa18.86■□□□□ 0.61
SYVN1-215ENST00000533685 TRHP20396 242 aaPredicted RBP18.86■□□□□ 0.61
SYVN1-215ENST00000533685 TRIM26Q12899 539 aaPredicted RBP18.86■□□□□ 0.61
SYVN1-215ENST00000533685 ZNF644Q9H582 1327 aaPredicted RBP18.84■□□□□ 0.61
SYVN1-215ENST00000533685 ZNF777Q9ULD5 760 aaPredicted RBP18.84■□□□□ 0.61
SYVN1-215ENST00000533685 SYCP2Q9BX26 1530 aa18.83■□□□□ 0.6
SYVN1-215ENST00000533685 CCDC141Q6ZP82 1450 aa18.83■□□□□ 0.6
SYVN1-215ENST00000533685 SHANK2Q9UPX8 1470 aa18.83■□□□□ 0.6
SYVN1-215ENST00000533685 DNMT1P26358 1616 aaKnown RBP18.82■□□□□ 0.6
SYVN1-215ENST00000533685 FAM50AQ14320 339 aaKnown RBP18.82■□□□□ 0.6
SYVN1-215ENST00000533685 SCAPERQ9BY12 1400 aa18.82■□□□□ 0.6
SYVN1-215ENST00000533685 ZNF518AQ6AHZ1 1483 aa18.81■□□□□ 0.6
SYVN1-215ENST00000533685 POGZQ7Z3K3 1410 aa18.81■□□□□ 0.6
SYVN1-215ENST00000533685 ARHGEF12Q9NZN5 1544 aa18.8■□□□□ 0.6
SYVN1-215ENST00000533685 ABCC5O15440 1437 aa18.8■□□□□ 0.6
SYVN1-215ENST00000533685 DAPK1P53355 1430 aa18.8■□□□□ 0.6
SYVN1-215ENST00000533685 DENND4BO75064 1496 aaPredicted RBP18.79■□□□□ 0.6
SYVN1-215ENST00000533685 TSPOAP1O95153 1857 aa18.78■□□□□ 0.6
SYVN1-215ENST00000533685 KDM5CP41229 1560 aa18.77■□□□□ 0.6
SYVN1-215ENST00000533685 MAST1Q9Y2H9 1570 aa18.76■□□□□ 0.59
SYVN1-215ENST00000533685 RTEL1-TNFRSF6BF6WH68 1400 aa18.76■□□□□ 0.59
SYVN1-215ENST00000533685 TRAPPC8Q9Y2L5 1435 aa18.76■□□□□ 0.59
SYVN1-215ENST00000533685 HNRNPMP52272 730 aaKnown RBP eCLIP18.76■□□□□ 0.59
SYVN1-215ENST00000533685 ROCK1Q13464 1354 aa18.76■□□□□ 0.59
SYVN1-215ENST00000533685 CROCC2H7BZ55 1655 aa18.75■□□□□ 0.59
SYVN1-215ENST00000533685 ADGRL2O95490 1459 aa18.74■□□□□ 0.59
SYVN1-215ENST00000533685 TSPY4P0CV99 314 aa18.74■□□□□ 0.59
SYVN1-215ENST00000533685 TSPY10P0CW01 314 aa18.74■□□□□ 0.59
SYVN1-215ENST00000533685 MLH3Q9UHC1 1453 aa18.73■□□□□ 0.59
SYVN1-215ENST00000533685 ZMYM4Q5VZL5 1548 aa18.73■□□□□ 0.59
SYVN1-215ENST00000533685 C9orf84Q5VXU9 1444 aa18.73■□□□□ 0.59
SYVN1-215ENST00000533685 MAGI2Q86UL8 1455 aa18.72■□□□□ 0.59
SYVN1-215ENST00000533685 RICTORQ6R327 1708 aa18.72■□□□□ 0.59
SYVN1-215ENST00000533685 PTPRKQ15262 1439 aa18.72■□□□□ 0.59
SYVN1-215ENST00000533685 FRMPD1Q5SYB0 1578 aa18.71■□□□□ 0.59
SYVN1-215ENST00000533685 ZFYVE16Q7Z3T8 1539 aa18.69■□□□□ 0.58
SYVN1-215ENST00000533685 INO80Q9ULG1 1556 aaPredicted RBP18.69■□□□□ 0.58
SYVN1-215ENST00000533685 AFAP1Q8N556 730 aa18.69■□□□□ 0.58
SYVN1-215ENST00000533685 COL17A1Q9UMD9 1497 aaPredicted RBP18.69■□□□□ 0.58
SYVN1-215ENST00000533685 SPAG9O60271 1321 aaKnown RBP18.69■□□□□ 0.58
SYVN1-215ENST00000533685 ANKRD30AQ9BXX3 1397 aa18.68■□□□□ 0.58
SYVN1-215ENST00000533685 PLXNC1O60486 1568 aa18.68■□□□□ 0.58
SYVN1-215ENST00000533685 NCOA1Q15788 1441 aa18.68■□□□□ 0.58
SYVN1-215ENST00000533685 HECW2Q9P2P5 1572 aa18.68■□□□□ 0.58
SYVN1-215ENST00000533685 HFM1A2PYH4 1435 aa18.67■□□□□ 0.58
SYVN1-215ENST00000533685 ATP7AQ04656 1500 aa18.67■□□□□ 0.58
SYVN1-215ENST00000533685 RAPGEF3O95398 923 aa18.66■□□□□ 0.58
SYVN1-215ENST00000533685 ADGBQ8N7X0 1667 aa18.66■□□□□ 0.58
SYVN1-215ENST00000533685 KDM6BO15054 1643 aa18.65■□□□□ 0.58
SYVN1-215ENST00000533685 ACIN1Q9UKV3 1341 aaKnown RBP18.63■□□□□ 0.57
SYVN1-215ENST00000533685 ITGAEP38570 1179 aa18.62■□□□□ 0.57
SYVN1-215ENST00000533685 KIDINS220Q9ULH0 1771 aa18.61■□□□□ 0.57
SYVN1-215ENST00000533685 KIF15Q9NS87 1388 aa18.61■□□□□ 0.57
SYVN1-215ENST00000533685 DUOX2Q9NRD8 1548 aa18.6■□□□□ 0.57
SYVN1-215ENST00000533685 NAIPQ13075 1403 aa18.6■□□□□ 0.57
SYVN1-215ENST00000533685 REREQ9P2R6 1566 aa18.59■□□□□ 0.57
SYVN1-215ENST00000533685 ERBINQ96RT1 1412 aa18.58■□□□□ 0.57
SYVN1-215ENST00000533685 GCC2Q8IWJ2 1684 aa18.58■□□□□ 0.57
SYVN1-215ENST00000533685 HRCP23327 699 aa18.58■□□□□ 0.56
SYVN1-215ENST00000533685 PCGF6Q9BYE7 350 aa18.58■□□□□ 0.56
SYVN1-215ENST00000533685 CHIC2Q9UKJ5 165 aa18.58■□□□□ 0.56
SYVN1-215ENST00000533685 ARHGEF40Q8TER5 1519 aa18.58■□□□□ 0.56
SYVN1-215ENST00000533685 DIP2CQ9Y2E4 1556 aa18.56■□□□□ 0.56
SYVN1-215ENST00000533685 SETD5Q9C0A6 1442 aa18.56■□□□□ 0.56
SYVN1-215ENST00000533685 ANKRD50Q9ULJ7 1429 aa18.56■□□□□ 0.56
SYVN1-215ENST00000533685 DHX29Q7Z478 1369 aaKnown RBP18.55■□□□□ 0.56
SYVN1-215ENST00000533685 ATP10AO60312 1499 aa18.55■□□□□ 0.56
SYVN1-215ENST00000533685 ABCA6Q8N139 1617 aa18.55■□□□□ 0.56
SYVN1-215ENST00000533685 A2MP01023 1474 aa18.54■□□□□ 0.56
SYVN1-215ENST00000533685 RRP7BPQ9NSQ0 103 aa18.54■□□□□ 0.56
SYVN1-215ENST00000533685 YEATS2Q9ULM3 1422 aa18.54■□□□□ 0.56
SYVN1-215ENST00000533685 MYT1LQ9UL68 1186 aa18.52■□□□□ 0.56
SYVN1-215ENST00000533685 EIF2AK4Q9P2K8 1649 aaKnown RBP18.52■□□□□ 0.55
SYVN1-215ENST00000533685 AGLP35573 1532 aa18.51■□□□□ 0.55
SYVN1-215ENST00000533685 BCORL1Q5H9F3 1711 aa18.51■□□□□ 0.55
SYVN1-215ENST00000533685 RAB3GAP2Q9H2M9 1393 aa18.48■□□□□ 0.55
SYVN1-215ENST00000533685 RNF17Q9BXT8 1623 aaKnown RBP18.44■□□□□ 0.54
SYVN1-215ENST00000533685 FAM135AQ9P2D6 1515 aa18.44■□□□□ 0.54
SYVN1-215ENST00000533685 DEPDC5O75140 1603 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms