RNA–Protein interactions for RNA: ENST00000533554.1

TTC17-213, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 3

Gene TTC17, Length 396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-213ENST00000533554 POTEGQ6S5H5 508 aa13.55□□□□□ -0.24
TTC17-213ENST00000533554 SNPHO15079 494 aa13.51□□□□□ -0.25
TTC17-213ENST00000533554 BBXQ8WY36 941 aaPredicted RBP13.5□□□□□ -0.25
TTC17-213ENST00000533554 MARVELD3Q96A59 401 aa13.48□□□□□ -0.25
TTC17-213ENST00000533554 POTEB3A0JP26 581 aa13.43□□□□□ -0.26
TTC17-213ENST00000533554 POTEBQ6S5H4 581 aa13.43□□□□□ -0.26
TTC17-213ENST00000533554 CADPS2Q86UW7 1296 aa13.43□□□□□ -0.26
TTC17-213ENST00000533554 RYDENQ9NUL5 291 aaKnown RBP13.41□□□□□ -0.26
TTC17-213ENST00000533554 TMC2Q8TDI7 906 aa13.4□□□□□ -0.26
TTC17-213ENST00000533554 KHSRPQ92945 711 aaKnown RBP eCLIP13.4□□□□□ -0.26
TTC17-213ENST00000533554 GPHNQ9NQX3 736 aaPredicted RBP13.4□□□□□ -0.26
TTC17-213ENST00000533554 NCKAP5LQ9HCH0 1330 aa13.39□□□□□ -0.27
TTC17-213ENST00000533554 GPR153Q6NV75 609 aa13.39□□□□□ -0.27
TTC17-213ENST00000533554 DSG2Q14126 1118 aa13.38□□□□□ -0.27
TTC17-213ENST00000533554 DOK7Q18PE1 504 aa13.38□□□□□ -0.27
TTC17-213ENST00000533554 CRISPLD2Q9H0B8 497 aa13.37□□□□□ -0.27
TTC17-213ENST00000533554 HOXB1P14653 301 aaPredicted RBP13.36□□□□□ -0.27
TTC17-213ENST00000533554 ARSIQ5FYB1 569 aa13.36□□□□□ -0.27
TTC17-213ENST00000533554 ZNF710Q8N1W2 664 aa13.36□□□□□ -0.27
TTC17-213ENST00000533554 FOXK1P85037 733 aa13.34□□□□□ -0.27
TTC17-213ENST00000533554 PAXIP1Q6ZW49 1069 aaPredicted RBP13.34□□□□□ -0.27
TTC17-213ENST00000533554 PLPP6Q8IY26 295 aa13.34□□□□□ -0.27
TTC17-213ENST00000533554 SPRYD3Q8NCJ5 442 aa13.34□□□□□ -0.27
TTC17-213ENST00000533554 CFAP44Q96MT7 982 aa13.32□□□□□ -0.28
TTC17-213ENST00000533554 FAM205CA6NFA0 338 aa13.3□□□□□ -0.28
TTC17-213ENST00000533554 EMP3P54852 163 aa13.3□□□□□ -0.28
TTC17-213ENST00000533554 CDAN1Q8IWY9 1227 aa13.29□□□□□ -0.28
TTC17-213ENST00000533554 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.29□□□□□ -0.28
TTC17-213ENST00000533554 SLC34A2O95436 690 aa13.27□□□□□ -0.29
TTC17-213ENST00000533554 PDE4AP27815 886 aa13.27□□□□□ -0.29
TTC17-213ENST00000533554 LARP6Q9BRS8 491 aaKnown RBP13.27□□□□□ -0.29
TTC17-213ENST00000533554 HS3ST6Q96QI5 342 aa13.26□□□□□ -0.29
TTC17-213ENST00000533554 ZSWIM6Q9HCJ5 1215 aa13.26□□□□□ -0.29
TTC17-213ENST00000533554 PCDHGA4Q9Y5G9 962 aa13.26□□□□□ -0.29
TTC17-213ENST00000533554 RIMBP2O15034 1052 aa13.25□□□□□ -0.29
TTC17-213ENST00000533554 KDM4FA0A1W2PPD8 638 aa13.22□□□□□ -0.29
TTC17-213ENST00000533554 NUDT7P0C024 238 aa13.22□□□□□ -0.29
TTC17-213ENST00000533554 PPP1R15BQ5SWA1 713 aa13.22□□□□□ -0.29
TTC17-213ENST00000533554 PTCD2Q8WV60 388 aaKnown RBP13.21□□□□□ -0.29
TTC17-213ENST00000533554 MFSD10Q14728 455 aa13.2□□□□□ -0.3
TTC17-213ENST00000533554 ERBB3P21860 1342 aa13.19□□□□□ -0.3
TTC17-213ENST00000533554 VARS2Q5ST30 1063 aaKnown RBP13.17□□□□□ -0.3
TTC17-213ENST00000533554 PCDH10Q9P2E7 1040 aa13.17□□□□□ -0.3
TTC17-213ENST00000533554 OXER1Q8TDS5 423 aa13.16□□□□□ -0.3
TTC17-213ENST00000533554 UPF1Q92900 1129 aaKnown RBP eCLIP13.16□□□□□ -0.3
TTC17-213ENST00000533554 DDX27Q96GQ7 796 aaKnown RBP13.16□□□□□ -0.3
TTC17-213ENST00000533554 ZNF316A6NFI3 1004 aaPredicted RBP13.15□□□□□ -0.3
TTC17-213ENST00000533554 KRTAP3-3Q9BYR6 98 aa13.15□□□□□ -0.3
TTC17-213ENST00000533554 KRTAP3-2Q9BYR7 98 aa13.15□□□□□ -0.3
TTC17-213ENST00000533554 TSHZ2Q9NRE2 1034 aa13.15□□□□□ -0.3
TTC17-213ENST00000533554 LHX6Q9UPM6 363 aa13.15□□□□□ -0.3
TTC17-213ENST00000533554 EMILIN3Q9NT22 766 aa13.14□□□□□ -0.31
TTC17-213ENST00000533554 POTEEQ6S8J3 1075 aa13.07□□□□□ -0.32
TTC17-213ENST00000533554 ZNF687Q8N1G0 1237 aa13.07□□□□□ -0.32
TTC17-213ENST00000533554 PLSCR2Q9NRY7 297 aa13.05□□□□□ -0.32
TTC17-213ENST00000533554 CAMK2BQ13554 666 aa13.04□□□□□ -0.32
TTC17-213ENST00000533554 TBC1D12O60347 775 aa13.03□□□□□ -0.32
TTC17-213ENST00000533554 ANO8Q9HCE9 1232 aaPredicted RBP13.01□□□□□ -0.33
TTC17-213ENST00000533554 AXIN2Q9Y2T1 843 aa12.99□□□□□ -0.33
TTC17-213ENST00000533554 EVI5O60447 810 aa12.98□□□□□ -0.33
TTC17-213ENST00000533554 MAP3K9P80192 1104 aa12.98□□□□□ -0.33
TTC17-213ENST00000533554 SPNS2Q8IVW8 549 aa12.98□□□□□ -0.33
TTC17-213ENST00000533554 PLCB2Q00722 1185 aa12.97□□□□□ -0.33
TTC17-213ENST00000533554 DPYSL4O14531 572 aa12.95□□□□□ -0.34
TTC17-213ENST00000533554 E2F4Q16254 413 aa12.9□□□□□ -0.34
TTC17-213ENST00000533554 PSEN2P49810 448 aa12.89□□□□□ -0.35
TTC17-213ENST00000533554 FOSBP53539 338 aa12.89□□□□□ -0.35
TTC17-213ENST00000533554 ZNF454Q8N9F8 522 aa12.88□□□□□ -0.35
TTC17-213ENST00000533554 WDR70Q9NW82 654 aa12.88□□□□□ -0.35
TTC17-213ENST00000533554 DMRTA1Q5VZB9 504 aa12.87□□□□□ -0.35
TTC17-213ENST00000533554 MMRN1Q13201 1228 aa12.86□□□□□ -0.35
TTC17-213ENST00000533554 ANKRD13DQ6ZTN6 518 aa12.86□□□□□ -0.35
TTC17-213ENST00000533554 PCDHGA10Q9Y5H3 936 aa12.85□□□□□ -0.35
TTC17-213ENST00000533554 PPP4R3BQ5MIZ7 849 aa12.84□□□□□ -0.35
TTC17-213ENST00000533554 PSDA5PKW4 1024 aaPredicted RBP12.83□□□□□ -0.36
TTC17-213ENST00000533554 ARHGAP33O14559 1287 aa12.83□□□□□ -0.36
TTC17-213ENST00000533554 LSM11P83369 360 aaKnown RBP eCLIP12.83□□□□□ -0.36
TTC17-213ENST00000533554 ADAM33Q9BZ11 813 aa12.83□□□□□ -0.36
TTC17-213ENST00000533554 ARIH1Q9Y4X5 557 aaPredicted RBP12.8□□□□□ -0.36
TTC17-213ENST00000533554 PBX2P40425 430 aa12.79□□□□□ -0.36
TTC17-213ENST00000533554 DDX12PQ92771 950 aa12.79□□□□□ -0.36
TTC17-213ENST00000533554 JPH4Q96JJ6 628 aa12.79□□□□□ -0.36
TTC17-213ENST00000533554 KDM2AQ9Y2K7 1162 aa12.79□□□□□ -0.36
TTC17-213ENST00000533554 ZDHHC16Q969W1 377 aa12.78□□□□□ -0.36
TTC17-213ENST00000533554 PTGER2P43116 358 aa12.77□□□□□ -0.37
TTC17-213ENST00000533554 HAP1P54257 671 aaPredicted RBP12.77□□□□□ -0.37
TTC17-213ENST00000533554 KCNK17Q96T54 332 aa12.77□□□□□ -0.37
TTC17-213ENST00000533554 BCL2L12Q9HB09 334 aa12.77□□□□□ -0.37
TTC17-213ENST00000533554 PRIM1P49642 420 aaKnown RBP12.76□□□□□ -0.37
TTC17-213ENST00000533554 PDIA6Q15084 440 aa12.76□□□□□ -0.37
TTC17-213ENST00000533554 KCNV2Q8TDN2 545 aa12.76□□□□□ -0.37
TTC17-213ENST00000533554 PHF14O94880 888 aa12.74□□□□□ -0.37
TTC17-213ENST00000533554 SPDYE16A6NNV3 312 aaPredicted RBP12.71□□□□□ -0.37
TTC17-213ENST00000533554 COL9A1P20849 921 aa12.71□□□□□ -0.37
TTC17-213ENST00000533554 ADGRD1Q6QNK2 874 aa12.71□□□□□ -0.37
TTC17-213ENST00000533554 TYW1BQ6NUM6 668 aa12.7□□□□□ -0.38
TTC17-213ENST00000533554 HRO43593 1189 aa12.69□□□□□ -0.38
TTC17-213ENST00000533554 RBM33Q96EV2 1170 aaKnown RBP12.69□□□□□ -0.38
TTC17-213ENST00000533554 PTPREP23469 700 aa12.68□□□□□ -0.38
TTC17-213ENST00000533554 VPS9D1Q9Y2B5 631 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms