RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 TSHZ2Q9NRE2 1034 aa7.06□□□□□ -1.28
ATM-220ENST00000533526 SLAIN1Q8ND83 568 aa7.04□□□□□ -1.28
ATM-220ENST00000533526 OTUD5Q96G74 571 aa7.04□□□□□ -1.28
ATM-220ENST00000533526 GPHNQ9NQX3 736 aaPredicted RBP7.04□□□□□ -1.28
ATM-220ENST00000533526 CRISPLD2Q9H0B8 497 aa7.03□□□□□ -1.28
ATM-220ENST00000533526 KIF3CO14782 793 aa7.02□□□□□ -1.29
ATM-220ENST00000533526 VSIG10Q8N0Z9 540 aa7.02□□□□□ -1.29
ATM-220ENST00000533526 C2orf72A6NCS6 295 aa7.01□□□□□ -1.29
ATM-220ENST00000533526 TMEM92Q6UXU6 159 aa7.01□□□□□ -1.29
ATM-220ENST00000533526 CADPS2Q86UW7 1296 aa7.01□□□□□ -1.29
ATM-220ENST00000533526 LARP6Q9BRS8 491 aaKnown RBP7.01□□□□□ -1.29
ATM-220ENST00000533526 WDR70Q9NW82 654 aa7.01□□□□□ -1.29
ATM-220ENST00000533526 SNPHO15079 494 aa7□□□□□ -1.29
ATM-220ENST00000533526 FOXK1P85037 733 aa7□□□□□ -1.29
ATM-220ENST00000533526 NCKAP5LQ9HCH0 1330 aa7□□□□□ -1.29
ATM-220ENST00000533526 DDX27Q96GQ7 796 aaKnown RBP6.99□□□□□ -1.29
ATM-220ENST00000533526 MFSD10Q14728 455 aa6.98□□□□□ -1.29
ATM-220ENST00000533526 SLC24A1O60721 1099 aa6.96□□□□□ -1.3
ATM-220ENST00000533526 DSG2Q14126 1118 aa6.96□□□□□ -1.3
ATM-220ENST00000533526 PPP1R15BQ5SWA1 713 aa6.96□□□□□ -1.3
ATM-220ENST00000533526 PLPP6Q8IY26 295 aa6.96□□□□□ -1.3
ATM-220ENST00000533526 RIMBP2O15034 1052 aa6.94□□□□□ -1.3
ATM-220ENST00000533526 DOK7Q18PE1 504 aa6.94□□□□□ -1.3
ATM-220ENST00000533526 SLC34A2O95436 690 aa6.93□□□□□ -1.3
ATM-220ENST00000533526 E2F4Q16254 413 aa6.93□□□□□ -1.3
ATM-220ENST00000533526 TBC1D12O60347 775 aa6.92□□□□□ -1.3
ATM-220ENST00000533526 ZSWIM6Q9HCJ5 1215 aa6.92□□□□□ -1.3
ATM-220ENST00000533526 KDM2AQ9Y2K7 1162 aa6.92□□□□□ -1.3
ATM-220ENST00000533526 CAMK2BQ13554 666 aa6.91□□□□□ -1.3
ATM-220ENST00000533526 ZNF710Q8N1W2 664 aa6.91□□□□□ -1.3
ATM-220ENST00000533526 P3H3Q8IVL6 736 aa6.9□□□□□ -1.3
ATM-220ENST00000533526 HOXB3P14651 431 aaPredicted RBP6.89□□□□□ -1.31
ATM-220ENST00000533526 PTCD2Q8WV60 388 aaKnown RBP6.89□□□□□ -1.31
ATM-220ENST00000533526 OXER1Q8TDS5 423 aa6.87□□□□□ -1.31
ATM-220ENST00000533526 ARIH1Q9Y4X5 557 aaPredicted RBP6.87□□□□□ -1.31
ATM-220ENST00000533526 MAP3K9P80192 1104 aa6.86□□□□□ -1.31
ATM-220ENST00000533526 ARHGEF1Q92888 912 aaKnown RBP6.86□□□□□ -1.31
ATM-220ENST00000533526 FAM163AQ96GL9 167 aaPredicted RBP6.85□□□□□ -1.31
ATM-220ENST00000533526 PCDHGA4Q9Y5G9 962 aa6.85□□□□□ -1.31
ATM-220ENST00000533526 HOXB1P14653 301 aaPredicted RBP6.84□□□□□ -1.31
ATM-220ENST00000533526 GPR153Q6NV75 609 aa6.84□□□□□ -1.31
ATM-220ENST00000533526 UPF1Q92900 1129 aaKnown RBP eCLIP6.84□□□□□ -1.31
ATM-220ENST00000533526 EMILIN3Q9NT22 766 aa6.84□□□□□ -1.31
ATM-220ENST00000533526 ZNF316A6NFI3 1004 aaPredicted RBP6.83□□□□□ -1.32
ATM-220ENST00000533526 ARSIQ5FYB1 569 aa6.83□□□□□ -1.32
ATM-220ENST00000533526 SPDYE16A6NNV3 312 aaPredicted RBP6.82□□□□□ -1.32
ATM-220ENST00000533526 ST18O60284 1047 aa6.82□□□□□ -1.32
ATM-220ENST00000533526 KCNV2Q8TDN2 545 aa6.82□□□□□ -1.32
ATM-220ENST00000533526 DPYSL4O14531 572 aa6.81□□□□□ -1.32
ATM-220ENST00000533526 ANO8Q9HCE9 1232 aaPredicted RBP6.8□□□□□ -1.32
ATM-220ENST00000533526 EVI5O60447 810 aa6.79□□□□□ -1.32
ATM-220ENST00000533526 PSDA5PKW4 1024 aaPredicted RBP6.78□□□□□ -1.32
ATM-220ENST00000533526 NUDT7P0C024 238 aa6.78□□□□□ -1.32
ATM-220ENST00000533526 PDIA6Q15084 440 aa6.78□□□□□ -1.32
ATM-220ENST00000533526 KDM4FA0A1W2PPD8 638 aa6.77□□□□□ -1.33
ATM-220ENST00000533526 KHSRPQ92945 711 aaKnown RBP eCLIP6.77□□□□□ -1.33
ATM-220ENST00000533526 PTGER2P43116 358 aa6.76□□□□□ -1.33
ATM-220ENST00000533526 EMP3P54852 163 aa6.76□□□□□ -1.33
ATM-220ENST00000533526 ERBB3P21860 1342 aa6.75□□□□□ -1.33
ATM-220ENST00000533526 LHX6Q9UPM6 363 aa6.74□□□□□ -1.33
ATM-220ENST00000533526 NBR1Q14596 966 aa6.73□□□□□ -1.33
ATM-220ENST00000533526 LCE2DQ5TA82 110 aaPredicted RBP6.73□□□□□ -1.33
ATM-220ENST00000533526 SMYD5Q6GMV2 418 aa6.73□□□□□ -1.33
ATM-220ENST00000533526 MARVELD3Q96A59 401 aa6.73□□□□□ -1.33
ATM-220ENST00000533526 PHF14O94880 888 aa6.72□□□□□ -1.33
ATM-220ENST00000533526 EPAS1Q99814 870 aa6.72□□□□□ -1.33
ATM-220ENST00000533526 FAM205CA6NFA0 338 aa6.71□□□□□ -1.34
ATM-220ENST00000533526 TULP1O00294 542 aaPredicted RBP6.71□□□□□ -1.34
ATM-220ENST00000533526 PPP4R3BQ5MIZ7 849 aa6.71□□□□□ -1.34
ATM-220ENST00000533526 JPH4Q96JJ6 628 aa6.71□□□□□ -1.34
ATM-220ENST00000533526 SEMA3EO15041 775 aa6.7□□□□□ -1.34
ATM-220ENST00000533526 FOSBP53539 338 aa6.7□□□□□ -1.34
ATM-220ENST00000533526 TYW1BQ6NUM6 668 aa6.7□□□□□ -1.34
ATM-220ENST00000533526 ZNF454Q8N9F8 522 aa6.7□□□□□ -1.34
ATM-220ENST00000533526 FBXW7Q969H0 707 aa6.7□□□□□ -1.34
ATM-220ENST00000533526 TESPA1A2RU30 521 aaPredicted RBP6.69□□□□□ -1.34
ATM-220ENST00000533526 GRXCR2A6NFK2 248 aa6.69□□□□□ -1.34
ATM-220ENST00000533526 VARS2Q5ST30 1063 aaKnown RBP6.69□□□□□ -1.34
ATM-220ENST00000533526 ZNF687Q8N1G0 1237 aa6.69□□□□□ -1.34
ATM-220ENST00000533526 DDX12PQ92771 950 aa6.69□□□□□ -1.34
ATM-220ENST00000533526 ZDHHC16Q969W1 377 aa6.69□□□□□ -1.34
ATM-220ENST00000533526 BCANQ96GW7 911 aa6.69□□□□□ -1.34
ATM-220ENST00000533526 HS3ST6Q96QI5 342 aa6.69□□□□□ -1.34
ATM-220ENST00000533526 POTEMA6NI47 508 aa6.68□□□□□ -1.34
ATM-220ENST00000533526 PCDHGA10Q9Y5H3 936 aa6.68□□□□□ -1.34
ATM-220ENST00000533526 POTEGQ6S5H5 508 aa6.67□□□□□ -1.34
ATM-220ENST00000533526 MLLT3P42568 568 aaPredicted RBP6.66□□□□□ -1.34
ATM-220ENST00000533526 KCNH8Q96L42 1107 aa6.66□□□□□ -1.34
ATM-220ENST00000533526 OSBPP22059 807 aa6.65□□□□□ -1.34
ATM-220ENST00000533526 PBX2P40425 430 aa6.65□□□□□ -1.34
ATM-220ENST00000533526 BCL2L12Q9HB09 334 aa6.65□□□□□ -1.34
ATM-220ENST00000533526 PCDH10Q9P2E7 1040 aa6.65□□□□□ -1.34
ATM-220ENST00000533526 ARHGAP33O14559 1287 aa6.64□□□□□ -1.35
ATM-220ENST00000533526 PTPREP23469 700 aa6.64□□□□□ -1.35
ATM-220ENST00000533526 POTEB3A0JP26 581 aa6.63□□□□□ -1.35
ATM-220ENST00000533526 MAP3K7O43318 606 aa6.63□□□□□ -1.35
ATM-220ENST00000533526 EN1Q05925 392 aaPredicted RBP6.63□□□□□ -1.35
ATM-220ENST00000533526 C6orf132Q5T0Z8 1188 aa6.63□□□□□ -1.35
ATM-220ENST00000533526 POTEBQ6S5H4 581 aa6.63□□□□□ -1.35
ATM-220ENST00000533526 CERKQ8TCT0 537 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms