RNA–Protein interactions for RNA: ENST00000533183.1

PKHD1L1-203, Transcript of PKHD1 like 1, humanhuman

TSL 3

Gene PKHD1L1, Length 807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-203ENST00000533183 OTUD5Q96G74 571 aa17.23■□□□□ 0.35
PKHD1L1-203ENST00000533183 TMEM92Q6UXU6 159 aa17.2■□□□□ 0.34
PKHD1L1-203ENST00000533183 CRISPLD2Q9H0B8 497 aa17.15■□□□□ 0.34
PKHD1L1-203ENST00000533183 SLAIN1Q8ND83 568 aa17.14■□□□□ 0.33
PKHD1L1-203ENST00000533183 NCKAP5LQ9HCH0 1330 aa17.14■□□□□ 0.33
PKHD1L1-203ENST00000533183 KIF3CO14782 793 aa17.13■□□□□ 0.33
PKHD1L1-203ENST00000533183 PDE4AP27815 886 aa17.13■□□□□ 0.33
PKHD1L1-203ENST00000533183 TMC2Q8TDI7 906 aa17.13■□□□□ 0.33
PKHD1L1-203ENST00000533183 C2orf72A6NCS6 295 aa17.12■□□□□ 0.33
PKHD1L1-203ENST00000533183 GPHNQ9NQX3 736 aaPredicted RBP17.12■□□□□ 0.33
PKHD1L1-203ENST00000533183 LARP6Q9BRS8 491 aaKnown RBP17.06■□□□□ 0.32
PKHD1L1-203ENST00000533183 FOXK1P85037 733 aa17.03■□□□□ 0.32
PKHD1L1-203ENST00000533183 MFSD10Q14728 455 aa17.03■□□□□ 0.32
PKHD1L1-203ENST00000533183 DSG2Q14126 1118 aa17.01■□□□□ 0.31
PKHD1L1-203ENST00000533183 DDX27Q96GQ7 796 aaKnown RBP17■□□□□ 0.31
PKHD1L1-203ENST00000533183 VSIG10Q8N0Z9 540 aa16.99■□□□□ 0.31
PKHD1L1-203ENST00000533183 PPP1R15BQ5SWA1 713 aa16.98■□□□□ 0.31
PKHD1L1-203ENST00000533183 PLPP6Q8IY26 295 aa16.96■□□□□ 0.31
PKHD1L1-203ENST00000533183 SLC24A1O60721 1099 aa16.95■□□□□ 0.3
PKHD1L1-203ENST00000533183 KDM2AQ9Y2K7 1162 aa16.95■□□□□ 0.3
PKHD1L1-203ENST00000533183 WDR70Q9NW82 654 aa16.94■□□□□ 0.3
PKHD1L1-203ENST00000533183 SNPHO15079 494 aa16.88■□□□□ 0.29
PKHD1L1-203ENST00000533183 HOXB3P14651 431 aaPredicted RBP16.86■□□□□ 0.29
PKHD1L1-203ENST00000533183 DOK7Q18PE1 504 aa16.84■□□□□ 0.29
PKHD1L1-203ENST00000533183 CAMK2BQ13554 666 aa16.83■□□□□ 0.28
PKHD1L1-203ENST00000533183 SLC34A2O95436 690 aa16.82■□□□□ 0.28
PKHD1L1-203ENST00000533183 E2F4Q16254 413 aa16.81■□□□□ 0.28
PKHD1L1-203ENST00000533183 PTCD2Q8WV60 388 aaKnown RBP16.76■□□□□ 0.27
PKHD1L1-203ENST00000533183 EMILIN3Q9NT22 766 aa16.76■□□□□ 0.27
PKHD1L1-203ENST00000533183 RIMBP2O15034 1052 aa16.75■□□□□ 0.27
PKHD1L1-203ENST00000533183 ZNF710Q8N1W2 664 aa16.74■□□□□ 0.27
PKHD1L1-203ENST00000533183 OXER1Q8TDS5 423 aa16.74■□□□□ 0.27
PKHD1L1-203ENST00000533183 ZSWIM6Q9HCJ5 1215 aa16.73■□□□□ 0.27
PKHD1L1-203ENST00000533183 UPF1Q92900 1129 aaKnown RBP eCLIP16.71■□□□□ 0.27
PKHD1L1-203ENST00000533183 PCDHGA4Q9Y5G9 962 aa16.71■□□□□ 0.27
PKHD1L1-203ENST00000533183 KCNV2Q8TDN2 545 aa16.7■□□□□ 0.26
PKHD1L1-203ENST00000533183 P3H3Q8IVL6 736 aa16.69■□□□□ 0.26
PKHD1L1-203ENST00000533183 FAM163AQ96GL9 167 aaPredicted RBP16.69■□□□□ 0.26
PKHD1L1-203ENST00000533183 GPR153Q6NV75 609 aa16.68■□□□□ 0.26
PKHD1L1-203ENST00000533183 TBC1D12O60347 775 aa16.67■□□□□ 0.26
PKHD1L1-203ENST00000533183 ARIH1Q9Y4X5 557 aaPredicted RBP16.67■□□□□ 0.26
PKHD1L1-203ENST00000533183 ST18O60284 1047 aa16.66■□□□□ 0.26
PKHD1L1-203ENST00000533183 ARSIQ5FYB1 569 aa16.65■□□□□ 0.26
PKHD1L1-203ENST00000533183 HOXB1P14653 301 aaPredicted RBP16.64■□□□□ 0.25
PKHD1L1-203ENST00000533183 MAP3K9P80192 1104 aa16.64■□□□□ 0.25
PKHD1L1-203ENST00000533183 DPYSL4O14531 572 aa16.63■□□□□ 0.25
PKHD1L1-203ENST00000533183 ARHGEF1Q92888 912 aaKnown RBP16.63■□□□□ 0.25
PKHD1L1-203ENST00000533183 LCE2DQ5TA82 110 aaPredicted RBP16.61■□□□□ 0.25
PKHD1L1-203ENST00000533183 KHSRPQ92945 711 aaKnown RBP eCLIP16.61■□□□□ 0.25
PKHD1L1-203ENST00000533183 KDM4FA0A1W2PPD8 638 aa16.57■□□□□ 0.24
PKHD1L1-203ENST00000533183 NUDT7P0C024 238 aa16.56■□□□□ 0.24
PKHD1L1-203ENST00000533183 EVI5O60447 810 aa16.55■□□□□ 0.24
PKHD1L1-203ENST00000533183 PDIA6Q15084 440 aa16.53■□□□□ 0.24
PKHD1L1-203ENST00000533183 SPDYE16A6NNV3 312 aaPredicted RBP16.52■□□□□ 0.24
PKHD1L1-203ENST00000533183 ANO8Q9HCE9 1232 aaPredicted RBP16.51■□□□□ 0.23
PKHD1L1-203ENST00000533183 ZNF316A6NFI3 1004 aaPredicted RBP16.5■□□□□ 0.23
PKHD1L1-203ENST00000533183 MARVELD3Q96A59 401 aa16.49■□□□□ 0.23
PKHD1L1-203ENST00000533183 EMP3P54852 163 aa16.46■□□□□ 0.23
PKHD1L1-203ENST00000533183 LHX6Q9UPM6 363 aa16.45■□□□□ 0.22
PKHD1L1-203ENST00000533183 PTGER2P43116 358 aa16.41■□□□□ 0.22
PKHD1L1-203ENST00000533183 ERBB3P21860 1342 aa16.4■□□□□ 0.22
PKHD1L1-203ENST00000533183 FAM205CA6NFA0 338 aa16.37■□□□□ 0.21
PKHD1L1-203ENST00000533183 SEMA3EO15041 775 aa16.37■□□□□ 0.21
PKHD1L1-203ENST00000533183 PSDA5PKW4 1024 aaPredicted RBP16.36■□□□□ 0.21
PKHD1L1-203ENST00000533183 FOSBP53539 338 aa16.34■□□□□ 0.21
PKHD1L1-203ENST00000533183 VARS2Q5ST30 1063 aaKnown RBP16.34■□□□□ 0.21
PKHD1L1-203ENST00000533183 DDX12PQ92771 950 aa16.34■□□□□ 0.21
PKHD1L1-203ENST00000533183 JPH4Q96JJ6 628 aa16.34■□□□□ 0.21
PKHD1L1-203ENST00000533183 NBR1Q14596 966 aa16.32■□□□□ 0.2
PKHD1L1-203ENST00000533183 ZNF454Q8N9F8 522 aa16.32■□□□□ 0.2
PKHD1L1-203ENST00000533183 HS3ST6Q96QI5 342 aa16.32■□□□□ 0.2
PKHD1L1-203ENST00000533183 POTEB3A0JP26 581 aa16.31■□□□□ 0.2
PKHD1L1-203ENST00000533183 PHF14O94880 888 aa16.31■□□□□ 0.2
PKHD1L1-203ENST00000533183 POTEBQ6S5H4 581 aa16.31■□□□□ 0.2
PKHD1L1-203ENST00000533183 PCDHGA10Q9Y5H3 936 aa16.31■□□□□ 0.2
PKHD1L1-203ENST00000533183 TESPA1A2RU30 521 aaPredicted RBP16.3■□□□□ 0.2
PKHD1L1-203ENST00000533183 GRXCR2A6NFK2 248 aa16.3■□□□□ 0.2
PKHD1L1-203ENST00000533183 MLLT3P42568 568 aaPredicted RBP16.3■□□□□ 0.2
PKHD1L1-203ENST00000533183 POTEGQ6S5H5 508 aa16.3■□□□□ 0.2
PKHD1L1-203ENST00000533183 POTEMA6NI47 508 aa16.29■□□□□ 0.2
PKHD1L1-203ENST00000533183 PPP4R3BQ5MIZ7 849 aa16.29■□□□□ 0.2
PKHD1L1-203ENST00000533183 EPAS1Q99814 870 aa16.28■□□□□ 0.2
PKHD1L1-203ENST00000533183 TYW1BQ6NUM6 668 aa16.26■□□□□ 0.19
PKHD1L1-203ENST00000533183 ZDHHC16Q969W1 377 aa16.25■□□□□ 0.19
PKHD1L1-203ENST00000533183 FBXW7Q969H0 707 aa16.24■□□□□ 0.19
PKHD1L1-203ENST00000533183 ZNF687Q8N1G0 1237 aa16.23■□□□□ 0.19
PKHD1L1-203ENST00000533183 OSBPP22059 807 aa16.22■□□□□ 0.19
PKHD1L1-203ENST00000533183 SMYD5Q6GMV2 418 aa16.21■□□□□ 0.19
PKHD1L1-203ENST00000533183 BCANQ96GW7 911 aa16.21■□□□□ 0.19
PKHD1L1-203ENST00000533183 ADAM33Q9BZ11 813 aa16.2■□□□□ 0.18
PKHD1L1-203ENST00000533183 BCL2L12Q9HB09 334 aa16.18■□□□□ 0.18
PKHD1L1-203ENST00000533183 PRIM1P49642 420 aaKnown RBP16.17■□□□□ 0.18
PKHD1L1-203ENST00000533183 EN1Q05925 392 aaPredicted RBP16.17■□□□□ 0.18
PKHD1L1-203ENST00000533183 RBM33Q96EV2 1170 aaKnown RBP16.16■□□□□ 0.18
PKHD1L1-203ENST00000533183 POTEEQ6S8J3 1075 aa16.14■□□□□ 0.17
PKHD1L1-203ENST00000533183 PBX2P40425 430 aa16.13■□□□□ 0.17
PKHD1L1-203ENST00000533183 TULP1O00294 542 aaPredicted RBP16.12■□□□□ 0.17
PKHD1L1-203ENST00000533183 MAP3K7O43318 606 aa16.12■□□□□ 0.17
PKHD1L1-203ENST00000533183 C6orf132Q5T0Z8 1188 aa16.11■□□□□ 0.17
PKHD1L1-203ENST00000533183 ARHGAP33O14559 1287 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms