RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 DIP2BQ9P265 1576 aa21.57■■□□□ 1.04
HIF3A-215ENST00000533145 TCOF1Q13428 1488 aaKnown RBP21.55■■□□□ 1.04
HIF3A-215ENST00000533145 PTPN23Q9H3S7 1636 aa21.55■■□□□ 1.04
HIF3A-215ENST00000533145 CFDP1Q9UEE9 299 aaPredicted RBP21.54■■□□□ 1.04
HIF3A-215ENST00000533145 MAP3K4Q9Y6R4 1608 aa21.54■■□□□ 1.04
HIF3A-215ENST00000533145 KIF13AQ9H1H9 1805 aa21.53■■□□□ 1.04
HIF3A-215ENST00000533145 CD109Q6YHK3 1445 aa21.52■■□□□ 1.04
HIF3A-215ENST00000533145 FAM69CQ0P6D2 419 aa21.5■■□□□ 1.03
HIF3A-215ENST00000533145 EFCAB2Q5VUJ9 269 aa21.49■■□□□ 1.03
HIF3A-215ENST00000533145 ARHGAP5Q13017 1502 aa21.48■■□□□ 1.03
HIF3A-215ENST00000533145 CAMSAP2Q08AD1 1489 aa21.45■■□□□ 1.02
HIF3A-215ENST00000533145 SAMD9LQ8IVG5 1584 aa21.44■■□□□ 1.02
HIF3A-215ENST00000533145 CFAP74Q9C0B2 1584 aa21.44■■□□□ 1.02
HIF3A-215ENST00000533145 FAM50AQ14320 339 aaKnown RBP21.43■■□□□ 1.02
HIF3A-215ENST00000533145 ZNF644Q9H582 1327 aaPredicted RBP21.43■■□□□ 1.02
HIF3A-215ENST00000533145 KIAA1107Q9UPP5 1409 aa21.43■■□□□ 1.02
HIF3A-215ENST00000533145 FANCAO15360 1455 aa21.43■■□□□ 1.02
HIF3A-215ENST00000533145 PLEKHH2Q8IVE3 1493 aa21.43■■□□□ 1.02
HIF3A-215ENST00000533145 ZNF777Q9ULD5 760 aaPredicted RBP21.41■■□□□ 1.02
HIF3A-215ENST00000533145 PPRC1Q5VV67 1664 aaKnown RBP21.4■■□□□ 1.02
HIF3A-215ENST00000533145 NEO1Q92859 1461 aa21.4■■□□□ 1.02
HIF3A-215ENST00000533145 RSPH4AQ5TD94 716 aa21.4■■□□□ 1.02
HIF3A-215ENST00000533145 ARHGEF5Q12774 1597 aa21.39■■□□□ 1.01
HIF3A-215ENST00000533145 DNMT1P26358 1616 aaKnown RBP21.38■■□□□ 1.01
HIF3A-215ENST00000533145 ABCC1P33527 1531 aa21.38■■□□□ 1.01
HIF3A-215ENST00000533145 MBD5Q9P267 1494 aa21.38■■□□□ 1.01
HIF3A-215ENST00000533145 AKNAQ7Z591 1439 aa21.38■■□□□ 1.01
HIF3A-215ENST00000533145 TSPOAP1O95153 1857 aa21.37■■□□□ 1.01
HIF3A-215ENST00000533145 PCGF6Q9BYE7 350 aa21.36■■□□□ 1.01
HIF3A-215ENST00000533145 TEX14Q8IWB6 1497 aa21.36■■□□□ 1.01
HIF3A-215ENST00000533145 ABCC5O15440 1437 aa21.34■■□□□ 1.01
HIF3A-215ENST00000533145 DAPK1P53355 1430 aa21.34■■□□□ 1.01
HIF3A-215ENST00000533145 ARHGEF12Q9NZN5 1544 aa21.34■■□□□ 1.01
HIF3A-215ENST00000533145 HNRNPMP52272 730 aaKnown RBP eCLIP21.33■■□□□ 1.01
HIF3A-215ENST00000533145 SYCP2Q9BX26 1530 aa21.33■■□□□ 1
HIF3A-215ENST00000533145 ADGRL1O94910 1474 aa21.32■■□□□ 1
HIF3A-215ENST00000533145 CROCC2H7BZ55 1655 aa21.31■■□□□ 1
HIF3A-215ENST00000533145 PTPRKQ15262 1439 aa21.3■■□□□ 1
HIF3A-215ENST00000533145 SCAPERQ9BY12 1400 aa21.3■■□□□ 1
HIF3A-215ENST00000533145 CCDC141Q6ZP82 1450 aa21.3■■□□□ 1
HIF3A-215ENST00000533145 SHANK2Q9UPX8 1470 aa21.29■■□□□ 1
HIF3A-215ENST00000533145 ITGAEP38570 1179 aa21.27■■□□□ 1
HIF3A-215ENST00000533145 TRAPPC8Q9Y2L5 1435 aa21.27■■□□□ 1
HIF3A-215ENST00000533145 MAST1Q9Y2H9 1570 aa21.27■□□□□ 0.99
HIF3A-215ENST00000533145 TSPY4P0CV99 314 aa21.26■□□□□ 0.99
HIF3A-215ENST00000533145 TSPY10P0CW01 314 aa21.26■□□□□ 0.99
HIF3A-215ENST00000533145 ROCK1Q13464 1354 aa21.24■□□□□ 0.99
HIF3A-215ENST00000533145 ADGRL2O95490 1459 aa21.24■□□□□ 0.99
HIF3A-215ENST00000533145 DENND4BO75064 1496 aaPredicted RBP21.23■□□□□ 0.99
HIF3A-215ENST00000533145 ZNF518AQ6AHZ1 1483 aa21.23■□□□□ 0.99
HIF3A-215ENST00000533145 ADGBQ8N7X0 1667 aa21.23■□□□□ 0.99
HIF3A-215ENST00000533145 RTEL1-TNFRSF6BF6WH68 1400 aa21.22■□□□□ 0.99
HIF3A-215ENST00000533145 C9orf84Q5VXU9 1444 aa21.21■□□□□ 0.99
HIF3A-215ENST00000533145 POGZQ7Z3K3 1410 aa21.21■□□□□ 0.99
HIF3A-215ENST00000533145 RICTORQ6R327 1708 aa21.21■□□□□ 0.99
HIF3A-215ENST00000533145 AFAP1Q8N556 730 aa21.21■□□□□ 0.99
HIF3A-215ENST00000533145 KDM5CP41229 1560 aa21.21■□□□□ 0.99
HIF3A-215ENST00000533145 NCOA1Q15788 1441 aa21.2■□□□□ 0.98
HIF3A-215ENST00000533145 CHIC2Q9UKJ5 165 aa21.18■□□□□ 0.98
HIF3A-215ENST00000533145 ANKRD30AQ9BXX3 1397 aa21.17■□□□□ 0.98
HIF3A-215ENST00000533145 HFM1A2PYH4 1435 aa21.17■□□□□ 0.98
HIF3A-215ENST00000533145 PLXNC1O60486 1568 aa21.16■□□□□ 0.98
HIF3A-215ENST00000533145 INO80Q9ULG1 1556 aaPredicted RBP21.16■□□□□ 0.98
HIF3A-215ENST00000533145 MLH3Q9UHC1 1453 aa21.16■□□□□ 0.98
HIF3A-215ENST00000533145 SPAG9O60271 1321 aaKnown RBP21.16■□□□□ 0.98
HIF3A-215ENST00000533145 FRMPD1Q5SYB0 1578 aa21.15■□□□□ 0.98
HIF3A-215ENST00000533145 NAIPQ13075 1403 aa21.15■□□□□ 0.98
HIF3A-215ENST00000533145 GCC2Q8IWJ2 1684 aa21.15■□□□□ 0.98
HIF3A-215ENST00000533145 SETD5Q9C0A6 1442 aa21.14■□□□□ 0.98
HIF3A-215ENST00000533145 RAPGEF3O95398 923 aa21.14■□□□□ 0.97
HIF3A-215ENST00000533145 HRCP23327 699 aa21.14■□□□□ 0.97
HIF3A-215ENST00000533145 KIDINS220Q9ULH0 1771 aa21.14■□□□□ 0.97
HIF3A-215ENST00000533145 ZFYVE16Q7Z3T8 1539 aa21.14■□□□□ 0.97
HIF3A-215ENST00000533145 COL17A1Q9UMD9 1497 aaPredicted RBP21.13■□□□□ 0.97
HIF3A-215ENST00000533145 ATP7AQ04656 1500 aa21.13■□□□□ 0.97
HIF3A-215ENST00000533145 ZMYM4Q5VZL5 1548 aa21.13■□□□□ 0.97
HIF3A-215ENST00000533145 HECW2Q9P2P5 1572 aa21.12■□□□□ 0.97
HIF3A-215ENST00000533145 RRP7BPQ9NSQ0 103 aa21.12■□□□□ 0.97
HIF3A-215ENST00000533145 MAGI2Q86UL8 1455 aa21.1■□□□□ 0.97
HIF3A-215ENST00000533145 KIF15Q9NS87 1388 aa21.08■□□□□ 0.96
HIF3A-215ENST00000533145 ACIN1Q9UKV3 1341 aaKnown RBP21.07■□□□□ 0.96
HIF3A-215ENST00000533145 DUOX2Q9NRD8 1548 aa21.07■□□□□ 0.96
HIF3A-215ENST00000533145 RAB3GAP2Q9H2M9 1393 aa21.05■□□□□ 0.96
HIF3A-215ENST00000533145 KDM6BO15054 1643 aa21.04■□□□□ 0.96
HIF3A-215ENST00000533145 ANKRD50Q9ULJ7 1429 aa21.04■□□□□ 0.96
HIF3A-215ENST00000533145 ABCA6Q8N139 1617 aa21.02■□□□□ 0.96
HIF3A-215ENST00000533145 DHX29Q7Z478 1369 aaKnown RBP21.01■□□□□ 0.95
HIF3A-215ENST00000533145 MYT1LQ9UL68 1186 aa21.01■□□□□ 0.95
HIF3A-215ENST00000533145 ERBINQ96RT1 1412 aa21.01■□□□□ 0.95
HIF3A-215ENST00000533145 DIP2CQ9Y2E4 1556 aa21.01■□□□□ 0.95
HIF3A-215ENST00000533145 YEATS2Q9ULM3 1422 aa20.98■□□□□ 0.95
HIF3A-215ENST00000533145 A2MP01023 1474 aa20.98■□□□□ 0.95
HIF3A-215ENST00000533145 EIF2AK4Q9P2K8 1649 aaKnown RBP20.97■□□□□ 0.95
HIF3A-215ENST00000533145 REREQ9P2R6 1566 aa20.97■□□□□ 0.95
HIF3A-215ENST00000533145 ATP10AO60312 1499 aa20.96■□□□□ 0.95
HIF3A-215ENST00000533145 BCORL1Q5H9F3 1711 aa20.95■□□□□ 0.94
HIF3A-215ENST00000533145 ARHGEF40Q8TER5 1519 aa20.94■□□□□ 0.94
HIF3A-215ENST00000533145 ILDR1Q86SU0 546 aaPredicted RBP20.91■□□□□ 0.94
HIF3A-215ENST00000533145 UNC13BO14795 1591 aa20.9■□□□□ 0.94
HIF3A-215ENST00000533145 DEPDC5O75140 1603 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms