RNA–Protein interactions for RNA: ENST00000533119.1

SCP2-216, Transcript of sterol carrier protein 2, humanhuman

TSL 5

Gene SCP2, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-216ENST00000533119 EMP3P54852 163 aa12.83□□□□□ -0.36
SCP2-216ENST00000533119 TMC2Q8TDI7 906 aa12.83□□□□□ -0.36
SCP2-216ENST00000533119 HOXB1P14653 301 aaPredicted RBP12.76□□□□□ -0.37
SCP2-216ENST00000533119 CDAN1Q8IWY9 1227 aa12.76□□□□□ -0.37
SCP2-216ENST00000533119 HOXB3P14651 431 aaPredicted RBP12.75□□□□□ -0.37
SCP2-216ENST00000533119 TMEM92Q6UXU6 159 aa12.72□□□□□ -0.37
SCP2-216ENST00000533119 MARVELD3Q96A59 401 aa12.71□□□□□ -0.37
SCP2-216ENST00000533119 PLSCR2Q9NRY7 297 aa12.7□□□□□ -0.38
SCP2-216ENST00000533119 C2orf72A6NCS6 295 aa12.69□□□□□ -0.38
SCP2-216ENST00000533119 KIF3CO14782 793 aa12.69□□□□□ -0.38
SCP2-216ENST00000533119 ERBB3P21860 1342 aa12.67□□□□□ -0.38
SCP2-216ENST00000533119 SLC34A2O95436 690 aa12.67□□□□□ -0.38
SCP2-216ENST00000533119 FAM205CA6NFA0 338 aa12.65□□□□□ -0.38
SCP2-216ENST00000533119 PPP1R37O75864 691 aa12.64□□□□□ -0.39
SCP2-216ENST00000533119 HS3ST6Q96QI5 342 aa12.64□□□□□ -0.39
SCP2-216ENST00000533119 GPHNQ9NQX3 736 aaPredicted RBP12.64□□□□□ -0.39
SCP2-216ENST00000533119 TBC1D12O60347 775 aa12.62□□□□□ -0.39
SCP2-216ENST00000533119 NKX1-1Q15270 411 aaPredicted RBP12.61□□□□□ -0.39
SCP2-216ENST00000533119 GPR153Q6NV75 609 aa12.61□□□□□ -0.39
SCP2-216ENST00000533119 FOXK1P85037 733 aa12.6□□□□□ -0.39
SCP2-216ENST00000533119 PSDA5PKW4 1024 aaPredicted RBP12.59□□□□□ -0.39
SCP2-216ENST00000533119 PDE4AP27815 886 aa12.59□□□□□ -0.39
SCP2-216ENST00000533119 BBXQ8WY36 941 aaPredicted RBP12.58□□□□□ -0.4
SCP2-216ENST00000533119 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.58□□□□□ -0.4
SCP2-216ENST00000533119 GTPBP6O43824 516 aaPredicted RBP12.55□□□□□ -0.4
SCP2-216ENST00000533119 ARSIQ5FYB1 569 aa12.55□□□□□ -0.4
SCP2-216ENST00000533119 VARS2Q5ST30 1063 aaKnown RBP12.53□□□□□ -0.4
SCP2-216ENST00000533119 PLPP6Q8IY26 295 aa12.53□□□□□ -0.4
SCP2-216ENST00000533119 PCDHGA4Q9Y5G9 962 aa12.52□□□□□ -0.41
SCP2-216ENST00000533119 ZNF316A6NFI3 1004 aaPredicted RBP12.51□□□□□ -0.41
SCP2-216ENST00000533119 ZNF687Q8N1G0 1237 aa12.51□□□□□ -0.41
SCP2-216ENST00000533119 PTCD2Q8WV60 388 aaKnown RBP12.51□□□□□ -0.41
SCP2-216ENST00000533119 PBX2P40425 430 aa12.48□□□□□ -0.41
SCP2-216ENST00000533119 CRISPLD2Q9H0B8 497 aa12.48□□□□□ -0.41
SCP2-216ENST00000533119 DSG2Q14126 1118 aa12.47□□□□□ -0.41
SCP2-216ENST00000533119 PTGER2P43116 358 aa12.46□□□□□ -0.41
SCP2-216ENST00000533119 PPP1R15BQ5SWA1 713 aa12.45□□□□□ -0.42
SCP2-216ENST00000533119 RTN4Q9NQC3 1192 aaKnown RBP12.45□□□□□ -0.42
SCP2-216ENST00000533119 NUDT7P0C024 238 aa12.44□□□□□ -0.42
SCP2-216ENST00000533119 SPRYD3Q8NCJ5 442 aa12.44□□□□□ -0.42
SCP2-216ENST00000533119 DDX27Q96GQ7 796 aaKnown RBP12.44□□□□□ -0.42
SCP2-216ENST00000533119 KCNH8Q96L42 1107 aa12.43□□□□□ -0.42
SCP2-216ENST00000533119 SPNS2Q8IVW8 549 aa12.41□□□□□ -0.42
SCP2-216ENST00000533119 LARP6Q9BRS8 491 aaKnown RBP12.4□□□□□ -0.42
SCP2-216ENST00000533119 POTEB3A0JP26 581 aa12.39□□□□□ -0.43
SCP2-216ENST00000533119 POTEBQ6S5H4 581 aa12.39□□□□□ -0.43
SCP2-216ENST00000533119 PPP4R3BQ5MIZ7 849 aa12.38□□□□□ -0.43
SCP2-216ENST00000533119 KRTAP3-3Q9BYR6 98 aa12.38□□□□□ -0.43
SCP2-216ENST00000533119 KRTAP3-2Q9BYR7 98 aa12.38□□□□□ -0.43
SCP2-216ENST00000533119 LHX6Q9UPM6 363 aa12.37□□□□□ -0.43
SCP2-216ENST00000533119 MFSD10Q14728 455 aa12.36□□□□□ -0.43
SCP2-216ENST00000533119 OXER1Q8TDS5 423 aa12.36□□□□□ -0.43
SCP2-216ENST00000533119 KHSRPQ92945 711 aaKnown RBP eCLIP12.36□□□□□ -0.43
SCP2-216ENST00000533119 NCKAP5LQ9HCH0 1330 aa12.35□□□□□ -0.43
SCP2-216ENST00000533119 MMRN1Q13201 1228 aa12.34□□□□□ -0.43
SCP2-216ENST00000533119 MAP3K9P80192 1104 aa12.31□□□□□ -0.44
SCP2-216ENST00000533119 ARHGAP33O14559 1287 aa12.3□□□□□ -0.44
SCP2-216ENST00000533119 LSM11P83369 360 aaKnown RBP eCLIP12.29□□□□□ -0.44
SCP2-216ENST00000533119 UPF1Q92900 1129 aaKnown RBP eCLIP12.29□□□□□ -0.44
SCP2-216ENST00000533119 KDM4FA0A1W2PPD8 638 aa12.28□□□□□ -0.44
SCP2-216ENST00000533119 ANKRD13DQ6ZTN6 518 aa12.26□□□□□ -0.45
SCP2-216ENST00000533119 PAXIP1Q6ZW49 1069 aaPredicted RBP12.24□□□□□ -0.45
SCP2-216ENST00000533119 CFAP44Q96MT7 982 aa12.24□□□□□ -0.45
SCP2-216ENST00000533119 WDR70Q9NW82 654 aa12.24□□□□□ -0.45
SCP2-216ENST00000533119 MYT1LQ9UL68 1186 aa12.24□□□□□ -0.45
SCP2-216ENST00000533119 TK2O00142 265 aa12.22□□□□□ -0.45
SCP2-216ENST00000533119 EVI5O60447 810 aa12.22□□□□□ -0.45
SCP2-216ENST00000533119 JPH4Q96JJ6 628 aa12.22□□□□□ -0.45
SCP2-216ENST00000533119 STAC3Q96MF2 364 aa12.22□□□□□ -0.45
SCP2-216ENST00000533119 ANO8Q9HCE9 1232 aaPredicted RBP12.22□□□□□ -0.45
SCP2-216ENST00000533119 RNF166Q96A37 237 aaPredicted RBP12.21□□□□□ -0.45
SCP2-216ENST00000533119 ZNF454Q8N9F8 522 aa12.2□□□□□ -0.46
SCP2-216ENST00000533119 CAMK2BQ13554 666 aa12.18□□□□□ -0.46
SCP2-216ENST00000533119 PTPREP23469 700 aa12.17□□□□□ -0.46
SCP2-216ENST00000533119 FBXW7Q969H0 707 aa12.17□□□□□ -0.46
SCP2-216ENST00000533119 FOSBP53539 338 aa12.16□□□□□ -0.46
SCP2-216ENST00000533119 CADPS2Q86UW7 1296 aa12.16□□□□□ -0.46
SCP2-216ENST00000533119 BCL2L12Q9HB09 334 aa12.16□□□□□ -0.46
SCP2-216ENST00000533119 ZDHHC16Q969W1 377 aa12.15□□□□□ -0.46
SCP2-216ENST00000533119 ADGRD1Q6QNK2 874 aa12.13□□□□□ -0.47
SCP2-216ENST00000533119 SPDYE16A6NNV3 312 aaPredicted RBP12.12□□□□□ -0.47
SCP2-216ENST00000533119 KCNK17Q96T54 332 aa12.12□□□□□ -0.47
SCP2-216ENST00000533119 SLC4A5Q9BY07 1137 aa12.12□□□□□ -0.47
SCP2-216ENST00000533119 AXIN2Q9Y2T1 843 aa12.12□□□□□ -0.47
SCP2-216ENST00000533119 PHF14O94880 888 aa12.11□□□□□ -0.47
SCP2-216ENST00000533119 EPAS1Q99814 870 aa12.11□□□□□ -0.47
SCP2-216ENST00000533119 EMILIN3Q9NT22 766 aa12.11□□□□□ -0.47
SCP2-216ENST00000533119 E2F4Q16254 413 aa12.1□□□□□ -0.47
SCP2-216ENST00000533119 TYW1BQ6NUM6 668 aa12.09□□□□□ -0.47
SCP2-216ENST00000533119 DPYSL4O14531 572 aa12.05□□□□□ -0.48
SCP2-216ENST00000533119 PSEN2P49810 448 aa12.05□□□□□ -0.48
SCP2-216ENST00000533119 POTEEQ6S8J3 1075 aa12.05□□□□□ -0.48
SCP2-216ENST00000533119 ARIH1Q9Y4X5 557 aaPredicted RBP12.05□□□□□ -0.48
SCP2-216ENST00000533119 NBPF3Q9H094 633 aa12.04□□□□□ -0.48
SCP2-216ENST00000533119 HCSTQ9UBK5 93 aa12.03□□□□□ -0.48
SCP2-216ENST00000533119 PPP1R3GB7ZBB8 358 aa12.01□□□□□ -0.49
SCP2-216ENST00000533119 PDIA6Q15084 440 aa12.01□□□□□ -0.49
SCP2-216ENST00000533119 DMRTA1Q5VZB9 504 aa12.01□□□□□ -0.49
SCP2-216ENST00000533119 GOLGA8CPA6NN73 597 aa12□□□□□ -0.49
SCP2-216ENST00000533119 VPS9D1Q9Y2B5 631 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms