RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 PLCH2O75038 1416 aa22.63■■□□□ 1.21
NXF1-214ENST00000533048 MAP3K4Q9Y6R4 1608 aa22.6■■□□□ 1.21
NXF1-214ENST00000533048 CFDP1Q9UEE9 299 aaPredicted RBP22.58■■□□□ 1.21
NXF1-214ENST00000533048 ARHGAP5Q13017 1502 aa22.57■■□□□ 1.2
NXF1-214ENST00000533048 CAMSAP2Q08AD1 1489 aa22.57■■□□□ 1.2
NXF1-214ENST00000533048 SAMD9LQ8IVG5 1584 aa22.55■■□□□ 1.2
NXF1-214ENST00000533048 KIF13AQ9H1H9 1805 aa22.55■■□□□ 1.2
NXF1-214ENST00000533048 CD109Q6YHK3 1445 aa22.53■■□□□ 1.2
NXF1-214ENST00000533048 CFAP74Q9C0B2 1584 aa22.51■■□□□ 1.19
NXF1-214ENST00000533048 DNMT1P26358 1616 aaKnown RBP22.51■■□□□ 1.19
NXF1-214ENST00000533048 PLEKHH2Q8IVE3 1493 aa22.51■■□□□ 1.19
NXF1-214ENST00000533048 FANCAO15360 1455 aa22.5■■□□□ 1.19
NXF1-214ENST00000533048 ARHGEF5Q12774 1597 aa22.5■■□□□ 1.19
NXF1-214ENST00000533048 KIAA1107Q9UPP5 1409 aa22.49■■□□□ 1.19
NXF1-214ENST00000533048 ABCC1P33527 1531 aa22.49■■□□□ 1.19
NXF1-214ENST00000533048 FAM50AQ14320 339 aaKnown RBP22.49■■□□□ 1.19
NXF1-214ENST00000533048 EFCAB2Q5VUJ9 269 aa22.48■■□□□ 1.19
NXF1-214ENST00000533048 PCGF6Q9BYE7 350 aa22.48■■□□□ 1.19
NXF1-214ENST00000533048 ZNF644Q9H582 1327 aaPredicted RBP22.48■■□□□ 1.19
NXF1-214ENST00000533048 MBD5Q9P267 1494 aa22.47■■□□□ 1.19
NXF1-214ENST00000533048 CROCC2H7BZ55 1655 aa22.46■■□□□ 1.19
NXF1-214ENST00000533048 PPRC1Q5VV67 1664 aaKnown RBP22.46■■□□□ 1.19
NXF1-214ENST00000533048 FAM69CQ0P6D2 419 aa22.45■■□□□ 1.18
NXF1-214ENST00000533048 NEO1Q92859 1461 aa22.45■■□□□ 1.18
NXF1-214ENST00000533048 SYCP2Q9BX26 1530 aa22.45■■□□□ 1.18
NXF1-214ENST00000533048 DAPK1P53355 1430 aa22.44■■□□□ 1.18
NXF1-214ENST00000533048 SHANK2Q9UPX8 1470 aa22.42■■□□□ 1.18
NXF1-214ENST00000533048 ABCC5O15440 1437 aa22.42■■□□□ 1.18
NXF1-214ENST00000533048 PTPRKQ15262 1439 aa22.41■■□□□ 1.18
NXF1-214ENST00000533048 ZNF777Q9ULD5 760 aaPredicted RBP22.41■■□□□ 1.18
NXF1-214ENST00000533048 ARHGEF12Q9NZN5 1544 aa22.41■■□□□ 1.18
NXF1-214ENST00000533048 CCDC141Q6ZP82 1450 aa22.41■■□□□ 1.18
NXF1-214ENST00000533048 TEX14Q8IWB6 1497 aa22.4■■□□□ 1.18
NXF1-214ENST00000533048 AKNAQ7Z591 1439 aa22.4■■□□□ 1.18
NXF1-214ENST00000533048 ADGRL1O94910 1474 aa22.39■■□□□ 1.17
NXF1-214ENST00000533048 RSPH4AQ5TD94 716 aa22.38■■□□□ 1.17
NXF1-214ENST00000533048 MAST1Q9Y2H9 1570 aa22.38■■□□□ 1.17
NXF1-214ENST00000533048 ADGBQ8N7X0 1667 aa22.36■■□□□ 1.17
NXF1-214ENST00000533048 ADGRL2O95490 1459 aa22.35■■□□□ 1.17
NXF1-214ENST00000533048 ROCK1Q13464 1354 aa22.35■■□□□ 1.17
NXF1-214ENST00000533048 TSPOAP1O95153 1857 aa22.34■■□□□ 1.17
NXF1-214ENST00000533048 SCAPERQ9BY12 1400 aa22.32■■□□□ 1.16
NXF1-214ENST00000533048 HNRNPMP52272 730 aaKnown RBP eCLIP22.32■■□□□ 1.16
NXF1-214ENST00000533048 TRAPPC8Q9Y2L5 1435 aa22.31■■□□□ 1.16
NXF1-214ENST00000533048 ITGAEP38570 1179 aa22.31■■□□□ 1.16
NXF1-214ENST00000533048 HFM1A2PYH4 1435 aa22.31■■□□□ 1.16
NXF1-214ENST00000533048 C9orf84Q5VXU9 1444 aa22.31■■□□□ 1.16
NXF1-214ENST00000533048 POGZQ7Z3K3 1410 aa22.31■■□□□ 1.16
NXF1-214ENST00000533048 KDM5CP41229 1560 aa22.3■■□□□ 1.16
NXF1-214ENST00000533048 ZNF518AQ6AHZ1 1483 aa22.3■■□□□ 1.16
NXF1-214ENST00000533048 GCC2Q8IWJ2 1684 aa22.3■■□□□ 1.16
NXF1-214ENST00000533048 PLXNC1O60486 1568 aa22.28■■□□□ 1.16
NXF1-214ENST00000533048 INO80Q9ULG1 1556 aaPredicted RBP22.28■■□□□ 1.16
NXF1-214ENST00000533048 RICTORQ6R327 1708 aa22.28■■□□□ 1.16
NXF1-214ENST00000533048 RTEL1-TNFRSF6BF6WH68 1400 aa22.26■■□□□ 1.15
NXF1-214ENST00000533048 NCOA1Q15788 1441 aa22.26■■□□□ 1.15
NXF1-214ENST00000533048 DENND4BO75064 1496 aaPredicted RBP22.26■■□□□ 1.15
NXF1-214ENST00000533048 ZFYVE16Q7Z3T8 1539 aa22.26■■□□□ 1.15
NXF1-214ENST00000533048 NAIPQ13075 1403 aa22.25■■□□□ 1.15
NXF1-214ENST00000533048 FRMPD1Q5SYB0 1578 aa22.24■■□□□ 1.15
NXF1-214ENST00000533048 ANKRD30AQ9BXX3 1397 aa22.24■■□□□ 1.15
NXF1-214ENST00000533048 TSPY4P0CV99 314 aa22.23■■□□□ 1.15
NXF1-214ENST00000533048 TSPY10P0CW01 314 aa22.23■■□□□ 1.15
NXF1-214ENST00000533048 SETD5Q9C0A6 1442 aa22.22■■□□□ 1.15
NXF1-214ENST00000533048 ATP7AQ04656 1500 aa22.21■■□□□ 1.15
NXF1-214ENST00000533048 ZMYM4Q5VZL5 1548 aa22.21■■□□□ 1.15
NXF1-214ENST00000533048 MLH3Q9UHC1 1453 aa22.21■■□□□ 1.15
NXF1-214ENST00000533048 HECW2Q9P2P5 1572 aa22.21■■□□□ 1.15
NXF1-214ENST00000533048 AFAP1Q8N556 730 aa22.19■■□□□ 1.14
NXF1-214ENST00000533048 CHIC2Q9UKJ5 165 aa22.19■■□□□ 1.14
NXF1-214ENST00000533048 KIDINS220Q9ULH0 1771 aa22.19■■□□□ 1.14
NXF1-214ENST00000533048 SPAG9O60271 1321 aaKnown RBP22.18■■□□□ 1.14
NXF1-214ENST00000533048 TRHP20396 242 aaPredicted RBP22.17■■□□□ 1.14
NXF1-214ENST00000533048 HRCP23327 699 aa22.16■■□□□ 1.14
NXF1-214ENST00000533048 RAB3GAP2Q9H2M9 1393 aa22.15■■□□□ 1.14
NXF1-214ENST00000533048 KIF15Q9NS87 1388 aa22.15■■□□□ 1.14
NXF1-214ENST00000533048 COL17A1Q9UMD9 1497 aaPredicted RBP22.15■■□□□ 1.14
NXF1-214ENST00000533048 RRP7BPQ9NSQ0 103 aa22.14■■□□□ 1.13
NXF1-214ENST00000533048 DUOX2Q9NRD8 1548 aa22.14■■□□□ 1.13
NXF1-214ENST00000533048 MAGI2Q86UL8 1455 aa22.13■■□□□ 1.13
NXF1-214ENST00000533048 KDM6BO15054 1643 aa22.13■■□□□ 1.13
NXF1-214ENST00000533048 RAPGEF3O95398 923 aa22.11■■□□□ 1.13
NXF1-214ENST00000533048 ANKRD50Q9ULJ7 1429 aa22.11■■□□□ 1.13
NXF1-214ENST00000533048 ABCA6Q8N139 1617 aa22.1■■□□□ 1.13
NXF1-214ENST00000533048 ERBINQ96RT1 1412 aa22.1■■□□□ 1.13
NXF1-214ENST00000533048 ACIN1Q9UKV3 1341 aaKnown RBP22.08■■□□□ 1.13
NXF1-214ENST00000533048 DIP2CQ9Y2E4 1556 aa22.08■■□□□ 1.13
NXF1-214ENST00000533048 EIF2AK4Q9P2K8 1649 aaKnown RBP22.06■■□□□ 1.12
NXF1-214ENST00000533048 BCORL1Q5H9F3 1711 aa22.04■■□□□ 1.12
NXF1-214ENST00000533048 REREQ9P2R6 1566 aa22.04■■□□□ 1.12
NXF1-214ENST00000533048 ARHGEF40Q8TER5 1519 aa22.03■■□□□ 1.12
NXF1-214ENST00000533048 DHX29Q7Z478 1369 aaKnown RBP22.02■■□□□ 1.12
NXF1-214ENST00000533048 YEATS2Q9ULM3 1422 aa22.02■■□□□ 1.12
NXF1-214ENST00000533048 UNC13BO14795 1591 aa22.02■■□□□ 1.12
NXF1-214ENST00000533048 A2MP01023 1474 aa22.02■■□□□ 1.12
NXF1-214ENST00000533048 KDM5DQ9BY66 1539 aa22.01■■□□□ 1.11
NXF1-214ENST00000533048 DEPDC5O75140 1603 aa22■■□□□ 1.11
NXF1-214ENST00000533048 ATP10AO60312 1499 aa21.96■■□□□ 1.11
NXF1-214ENST00000533048 RNF17Q9BXT8 1623 aaKnown RBP21.96■■□□□ 1.11
NXF1-214ENST00000533048 DHX57Q6P158 1386 aaKnown RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms