RNA–Protein interactions for RNA: ENST00000532776.5

RELA-218, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 2

Gene RELA, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-218ENST00000532776 TROQ12816 1431 aaPredicted RBP26.43■■□□□ 1.82
RELA-218ENST00000532776 SCAPERQ9BY12 1400 aa26.43■■□□□ 1.82
RELA-218ENST00000532776 YEATS2Q9ULM3 1422 aa26.43■■□□□ 1.82
RELA-218ENST00000532776 POGZQ7Z3K3 1410 aa26.42■■□□□ 1.82
RELA-218ENST00000532776 ILDR1Q86SU0 546 aaPredicted RBP26.41■■□□□ 1.82
RELA-218ENST00000532776 RIMS1Q86UR5 1692 aaKnown RBP26.4■■□□□ 1.82
RELA-218ENST00000532776 EFCAB2Q5VUJ9 269 aa26.39■■□□□ 1.82
RELA-218ENST00000532776 CLIP1P30622 1438 aa26.36■■□□□ 1.81
RELA-218ENST00000532776 PCF11O94913 1555 aaKnown RBP26.35■■□□□ 1.81
RELA-218ENST00000532776 CASKIN1Q8WXD9 1431 aa26.34■■□□□ 1.81
RELA-218ENST00000532776 CDC42BPBQ9Y5S2 1711 aa26.32■■□□□ 1.8
RELA-218ENST00000532776 ARHGAP5Q13017 1502 aa26.32■■□□□ 1.8
RELA-218ENST00000532776 CCDC18Q5T9S5 1454 aa26.31■■□□□ 1.8
RELA-218ENST00000532776 ATP10AO60312 1499 aa26.3■■□□□ 1.8
RELA-218ENST00000532776 LMTK3Q96Q04 1460 aa26.3■■□□□ 1.8
RELA-218ENST00000532776 ZNF518AQ6AHZ1 1483 aa26.29■■□□□ 1.8
RELA-218ENST00000532776 KDM5CP41229 1560 aa26.28■■□□□ 1.8
RELA-218ENST00000532776 FER1L4A9Z1Z3 1794 aa26.28■■□□□ 1.8
RELA-218ENST00000532776 PREX2Q70Z35 1606 aa26.26■■□□□ 1.79
RELA-218ENST00000532776 C9orf84Q5VXU9 1444 aa26.26■■□□□ 1.79
RELA-218ENST00000532776 FYCO1Q9BQS8 1478 aa26.24■■□□□ 1.79
RELA-218ENST00000532776 AFAP1Q8N556 730 aa26.23■■□□□ 1.79
RELA-218ENST00000532776 MLECQ14165 292 aa26.22■■□□□ 1.79
RELA-218ENST00000532776 ARHGEF12Q9NZN5 1544 aa26.22■■□□□ 1.79
RELA-218ENST00000532776 CDC42BPAQ5VT25 1732 aa26.2■■□□□ 1.79
RELA-218ENST00000532776 ABCC1P33527 1531 aa26.19■■□□□ 1.78
RELA-218ENST00000532776 DIP2CQ9Y2E4 1556 aa26.17■■□□□ 1.78
RELA-218ENST00000532776 ITSN2Q9NZM3 1697 aa26.17■■□□□ 1.78
RELA-218ENST00000532776 MLH3Q9UHC1 1453 aa26.16■■□□□ 1.78
RELA-218ENST00000532776 REREQ9P2R6 1566 aa26.16■■□□□ 1.78
RELA-218ENST00000532776 ABCA6Q8N139 1617 aa26.14■■□□□ 1.78
RELA-218ENST00000532776 PLPPR3Q6T4P5 718 aa26.14■■□□□ 1.78
RELA-218ENST00000532776 TRAPPC8Q9Y2L5 1435 aa26.14■■□□□ 1.77
RELA-218ENST00000532776 HSPA2P54652 639 aa26.09■■□□□ 1.77
RELA-218ENST00000532776 KIDINS220Q9ULH0 1771 aa26.08■■□□□ 1.77
RELA-218ENST00000532776 MYT1LQ9UL68 1186 aa26.08■■□□□ 1.77
RELA-218ENST00000532776 AGLP35573 1532 aa26.06■■□□□ 1.76
RELA-218ENST00000532776 GPATCH8Q9UKJ3 1502 aaKnown RBP26.06■■□□□ 1.76
RELA-218ENST00000532776 SAMD9LQ8IVG5 1584 aa26.06■■□□□ 1.76
RELA-218ENST00000532776 PREX1Q8TCU6 1659 aa26.06■■□□□ 1.76
RELA-218ENST00000532776 FBXO41Q8TF61 875 aa26.03■■□□□ 1.76
RELA-218ENST00000532776 CEBPAP49715 358 aaPredicted RBP26.02■■□□□ 1.76
RELA-218ENST00000532776 SETD1BQ9UPS6 1966 aaKnown RBP26.02■■□□□ 1.76
RELA-218ENST00000532776 SYCP2Q9BX26 1530 aa26■■□□□ 1.75
RELA-218ENST00000532776 ZNF777Q9ULD5 760 aaPredicted RBP25.98■■□□□ 1.75
RELA-218ENST00000532776 C3P01024 1663 aa25.98■■□□□ 1.75
RELA-218ENST00000532776 KIAA1107Q9UPP5 1409 aa25.96■■□□□ 1.75
RELA-218ENST00000532776 MTUS2Q5JR59 1369 aa25.95■■□□□ 1.74
RELA-218ENST00000532776 HNRNPMP52272 730 aaKnown RBP eCLIP25.94■■□□□ 1.74
RELA-218ENST00000532776 CCNB3Q8WWL7 1395 aa25.94■■□□□ 1.74
RELA-218ENST00000532776 PLEKHH2Q8IVE3 1493 aa25.93■■□□□ 1.74
RELA-218ENST00000532776 CFDP1Q9UEE9 299 aaPredicted RBP25.93■■□□□ 1.74
RELA-218ENST00000532776 SPAG9O60271 1321 aaKnown RBP25.91■■□□□ 1.74
RELA-218ENST00000532776 CEP162Q5TB80 1403 aa25.91■■□□□ 1.74
RELA-218ENST00000532776 INO80Q9ULG1 1556 aaPredicted RBP25.9■■□□□ 1.74
RELA-218ENST00000532776 ATP7AQ04656 1500 aa25.9■■□□□ 1.74
RELA-218ENST00000532776 STRCQ7RTU9 1775 aa25.9■■□□□ 1.74
RELA-218ENST00000532776 UHRF1BP1Q6BDS2 1440 aa25.89■■□□□ 1.74
RELA-218ENST00000532776 EHBP1L1Q8N3D4 1523 aa25.89■■□□□ 1.74
RELA-218ENST00000532776 TIAM1Q13009 1591 aa25.89■■□□□ 1.73
RELA-218ENST00000532776 SUPT6HQ7KZ85 1726 aaKnown RBP25.88■■□□□ 1.73
RELA-218ENST00000532776 CNTLNQ9NXG0 1405 aa25.88■■□□□ 1.73
RELA-218ENST00000532776 ESF1Q9H501 851 aaKnown RBP25.86■■□□□ 1.73
RELA-218ENST00000532776 PLXNC1O60486 1568 aa25.86■■□□□ 1.73
RELA-218ENST00000532776 MROH2AA6NES4 1674 aa25.85■■□□□ 1.73
RELA-218ENST00000532776 A2MP01023 1474 aa25.81■■□□□ 1.72
RELA-218ENST00000532776 ZNF644Q9H582 1327 aaPredicted RBP25.81■■□□□ 1.72
RELA-218ENST00000532776 MBD5Q9P267 1494 aa25.8■■□□□ 1.72
RELA-218ENST00000532776 CERKQ8TCT0 537 aa25.79■■□□□ 1.72
RELA-218ENST00000532776 ADGBQ8N7X0 1667 aa25.79■■□□□ 1.72
RELA-218ENST00000532776 DMRT2Q9Y5R5 561 aa25.77■■□□□ 1.72
RELA-218ENST00000532776 NPATQ14207 1427 aa25.77■■□□□ 1.72
RELA-218ENST00000532776 CLTCQ00610 1675 aaKnown RBP25.76■■□□□ 1.71
RELA-218ENST00000532776 ZMYM3Q14202 1370 aa25.75■■□□□ 1.71
RELA-218ENST00000532776 NCOA2Q15596 1464 aa25.73■■□□□ 1.71
RELA-218ENST00000532776 RTEL1-TNFRSF6BF6WH68 1400 aa25.72■■□□□ 1.71
RELA-218ENST00000532776 PTPRTO14522 1441 aa25.71■■□□□ 1.71
RELA-218ENST00000532776 NCOA1Q15788 1441 aa25.68■■□□□ 1.7
RELA-218ENST00000532776 GGT6Q6P531 493 aa25.67■■□□□ 1.7
RELA-218ENST00000532776 PPP6R1Q9UPN7 881 aa25.67■■□□□ 1.7
RELA-218ENST00000532776 CAMSAP2Q08AD1 1489 aa25.66■■□□□ 1.7
RELA-218ENST00000532776 CCDC141Q6ZP82 1450 aa25.66■■□□□ 1.7
RELA-218ENST00000532776 PTPRKQ15262 1439 aa25.65■■□□□ 1.7
RELA-218ENST00000532776 VPS8Q8N3P4 1428 aa25.65■■□□□ 1.7
RELA-218ENST00000532776 LOC105371045A0A1W2PR82 267 aa25.65■■□□□ 1.7
RELA-218ENST00000532776 DHX29Q7Z478 1369 aaKnown RBP25.65■■□□□ 1.7
RELA-218ENST00000532776 ZNF142P52746 1687 aaPredicted RBP25.64■■□□□ 1.69
RELA-218ENST00000532776 CAMSAP1Q5T5Y3 1602 aa25.63■■□□□ 1.69
RELA-218ENST00000532776 MYO3AQ8NEV4 1616 aa25.63■■□□□ 1.69
RELA-218ENST00000532776 RSPH4AQ5TD94 716 aa25.62■■□□□ 1.69
RELA-218ENST00000532776 ARHGEF5Q12774 1597 aa25.61■■□□□ 1.69
RELA-218ENST00000532776 LRRC9Q6ZRR7 1453 aa25.6■■□□□ 1.69
RELA-218ENST00000532776 CEP170BQ9Y4F5 1589 aaPredicted RBP25.58■■□□□ 1.69
RELA-218ENST00000532776 LTBP4Q8N2S1 1624 aa25.58■■□□□ 1.69
RELA-218ENST00000532776 MAP3K1Q13233 1512 aa25.57■■□□□ 1.68
RELA-218ENST00000532776 PLA2R1Q13018 1463 aa25.54■■□□□ 1.68
RELA-218ENST00000532776 FAM135AQ9P2D6 1515 aa25.54■■□□□ 1.68
RELA-218ENST00000532776 KIF3BO15066 747 aa25.54■■□□□ 1.68
RELA-218ENST00000532776 NCKAP5LQ9HCH0 1330 aa25.51■■□□□ 1.67
RELA-218ENST00000532776 KDM5DQ9BY66 1539 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms