RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 BCORL1Q5H9F3 1711 aa28.97■■■□□ 2.23
SMG1-203ENST00000532700 POGZQ7Z3K3 1410 aa28.96■■■□□ 2.23
SMG1-203ENST00000532700 SCAPERQ9BY12 1400 aa28.96■■■□□ 2.23
SMG1-203ENST00000532700 PREX2Q70Z35 1606 aa28.96■■■□□ 2.23
SMG1-203ENST00000532700 CDK11AQ9UQ88 783 aaPredicted RBP28.96■■■□□ 2.23
SMG1-203ENST00000532700 ARHGAP5Q13017 1502 aa28.94■■■□□ 2.22
SMG1-203ENST00000532700 CDC42BPAQ5VT25 1732 aa28.94■■■□□ 2.22
SMG1-203ENST00000532700 ZFYVE16Q7Z3T8 1539 aa28.92■■■□□ 2.22
SMG1-203ENST00000532700 CEP162Q5TB80 1403 aa28.92■■■□□ 2.22
SMG1-203ENST00000532700 MADDQ8WXG6 1647 aa28.91■■■□□ 2.22
SMG1-203ENST00000532700 HECW2Q9P2P5 1572 aa28.87■■■□□ 2.21
SMG1-203ENST00000532700 EFCAB2Q5VUJ9 269 aa28.86■■■□□ 2.21
SMG1-203ENST00000532700 ARHGEF12Q9NZN5 1544 aa28.85■■■□□ 2.21
SMG1-203ENST00000532700 KDM5CP41229 1560 aa28.84■■■□□ 2.21
SMG1-203ENST00000532700 ITSN2Q9NZM3 1697 aa28.83■■■□□ 2.21
SMG1-203ENST00000532700 LOC105371045A0A1W2PR82 267 aa28.83■■■□□ 2.21
SMG1-203ENST00000532700 ABCC1P33527 1531 aa28.83■■■□□ 2.21
SMG1-203ENST00000532700 RIMS1Q86UR5 1692 aaKnown RBP28.81■■■□□ 2.2
SMG1-203ENST00000532700 PTPRMP28827 1452 aa28.81■■■□□ 2.2
SMG1-203ENST00000532700 MAGI2Q86UL8 1455 aa28.81■■■□□ 2.2
SMG1-203ENST00000532700 ARID4BQ4LE39 1312 aaPredicted RBP28.79■■■□□ 2.2
SMG1-203ENST00000532700 SAMD9LQ8IVG5 1584 aa28.78■■■□□ 2.2
SMG1-203ENST00000532700 ZNF518AQ6AHZ1 1483 aa28.78■■■□□ 2.2
SMG1-203ENST00000532700 AFAP1Q8N556 730 aa28.77■■■□□ 2.2
SMG1-203ENST00000532700 TRAPPC8Q9Y2L5 1435 aa28.77■■■□□ 2.2
SMG1-203ENST00000532700 GPATCH8Q9UKJ3 1502 aaKnown RBP28.75■■■□□ 2.19
SMG1-203ENST00000532700 ABCA6Q8N139 1617 aa28.75■■■□□ 2.19
SMG1-203ENST00000532700 DIP2CQ9Y2E4 1556 aa28.75■■■□□ 2.19
SMG1-203ENST00000532700 ATP10AO60312 1499 aa28.72■■■□□ 2.19
SMG1-203ENST00000532700 TIAM1Q13009 1591 aa28.69■■■□□ 2.18
SMG1-203ENST00000532700 FER1L4A9Z1Z3 1794 aa28.69■■■□□ 2.18
SMG1-203ENST00000532700 SYCP2Q9BX26 1530 aa28.69■■■□□ 2.18
SMG1-203ENST00000532700 C9orf84Q5VXU9 1444 aa28.69■■■□□ 2.18
SMG1-203ENST00000532700 KIDINS220Q9ULH0 1771 aa28.68■■■□□ 2.18
SMG1-203ENST00000532700 EHBP1L1Q8N3D4 1523 aa28.67■■■□□ 2.18
SMG1-203ENST00000532700 MTUS2Q5JR59 1369 aa28.65■■■□□ 2.18
SMG1-203ENST00000532700 MLECQ14165 292 aa28.65■■■□□ 2.18
SMG1-203ENST00000532700 MLH3Q9UHC1 1453 aa28.64■■■□□ 2.17
SMG1-203ENST00000532700 ZNF777Q9ULD5 760 aaPredicted RBP28.62■■■□□ 2.17
SMG1-203ENST00000532700 REREQ9P2R6 1566 aa28.6■■■□□ 2.17
SMG1-203ENST00000532700 CCNB3Q8WWL7 1395 aa28.59■■■□□ 2.17
SMG1-203ENST00000532700 VPS8Q8N3P4 1428 aa28.57■■■□□ 2.16
SMG1-203ENST00000532700 LMTK3Q96Q04 1460 aa28.55■■■□□ 2.16
SMG1-203ENST00000532700 HNRNPMP52272 730 aaKnown RBP eCLIP28.55■■■□□ 2.163e-6■□□□□ 9
SMG1-203ENST00000532700 ZNF644Q9H582 1327 aaPredicted RBP28.54■■■□□ 2.16
SMG1-203ENST00000532700 PLPPR3Q6T4P5 718 aa28.54■■■□□ 2.16
SMG1-203ENST00000532700 INO80Q9ULG1 1556 aaPredicted RBP28.54■■■□□ 2.16
SMG1-203ENST00000532700 SUPT6HQ7KZ85 1726 aaKnown RBP28.52■■■□□ 2.16
SMG1-203ENST00000532700 CFDP1Q9UEE9 299 aaPredicted RBP28.52■■■□□ 2.16
SMG1-203ENST00000532700 MYT1LQ9UL68 1186 aa28.52■■■□□ 2.16
SMG1-203ENST00000532700 NCOA2Q15596 1464 aa28.52■■■□□ 2.16
SMG1-203ENST00000532700 ATP7AQ04656 1500 aa28.49■■■□□ 2.15
SMG1-203ENST00000532700 KIAA1107Q9UPP5 1409 aa28.49■■■□□ 2.15
SMG1-203ENST00000532700 AGLP35573 1532 aa28.48■■■□□ 2.15
SMG1-203ENST00000532700 MBD5Q9P267 1494 aa28.46■■■□□ 2.15
SMG1-203ENST00000532700 PLEKHH2Q8IVE3 1493 aa28.45■■■□□ 2.14
SMG1-203ENST00000532700 LRRC9Q6ZRR7 1453 aa28.44■■■□□ 2.14
SMG1-203ENST00000532700 CEBPAP49715 358 aaPredicted RBP28.43■■■□□ 2.14
SMG1-203ENST00000532700 PLXNC1O60486 1568 aa28.42■■■□□ 2.14
SMG1-203ENST00000532700 SPAG9O60271 1321 aaKnown RBP28.42■■■□□ 2.14
SMG1-203ENST00000532700 C3P01024 1663 aa28.42■■■□□ 2.14
SMG1-203ENST00000532700 KANK4Q5T7N3 995 aaPredicted RBP28.4■■■□□ 2.14
SMG1-203ENST00000532700 CAMSAP2Q08AD1 1489 aa28.4■■■□□ 2.14
SMG1-203ENST00000532700 HSPA2P54652 639 aa28.37■■■□□ 2.13
SMG1-203ENST00000532700 ADGBQ8N7X0 1667 aa28.37■■■□□ 2.13
SMG1-203ENST00000532700 PREX1Q8TCU6 1659 aa28.35■■■□□ 2.13
SMG1-203ENST00000532700 MAP3K1Q13233 1512 aa28.34■■■□□ 2.13
SMG1-203ENST00000532700 A2MP01023 1474 aa28.33■■■□□ 2.13
SMG1-203ENST00000532700 CLTCQ00610 1675 aaKnown RBP28.28■■■□□ 2.12
SMG1-203ENST00000532700 CCDC141Q6ZP82 1450 aa28.27■■■□□ 2.12
SMG1-203ENST00000532700 ARHGEF5Q12774 1597 aa28.26■■■□□ 2.11
SMG1-203ENST00000532700 MROH2AA6NES4 1674 aa28.26■■■□□ 2.11
SMG1-203ENST00000532700 RTEL1-TNFRSF6BF6WH68 1400 aa28.23■■■□□ 2.11
SMG1-203ENST00000532700 MYOM3Q5VTT5 1437 aa28.19■■■□□ 2.1
SMG1-203ENST00000532700 ILDR1Q86SU0 546 aaPredicted RBP28.19■■■□□ 2.1
SMG1-203ENST00000532700 STRCQ7RTU9 1775 aa28.19■■■□□ 2.1
SMG1-203ENST00000532700 CNTLNQ9NXG0 1405 aa28.17■■■□□ 2.1
SMG1-203ENST00000532700 SETD1BQ9UPS6 1966 aaKnown RBP28.14■■■□□ 2.1
SMG1-203ENST00000532700 UHRF1BP1Q6BDS2 1440 aa28.14■■■□□ 2.1
SMG1-203ENST00000532700 DHX29Q7Z478 1369 aaKnown RBP28.13■■■□□ 2.09
SMG1-203ENST00000532700 MAST1Q9Y2H9 1570 aa28.13■■■□□ 2.09
SMG1-203ENST00000532700 ZMYM3Q14202 1370 aa28.12■■■□□ 2.09
SMG1-203ENST00000532700 GGT6Q6P531 493 aa28.12■■■□□ 2.09
SMG1-203ENST00000532700 ESF1Q9H501 851 aaKnown RBP28.11■■■□□ 2.09
SMG1-203ENST00000532700 MIA2Q96PC5 1412 aa28.1■■■□□ 2.09
SMG1-203ENST00000532700 CROCC2H7BZ55 1655 aa28.09■■■□□ 2.09
SMG1-203ENST00000532700 PTPN23Q9H3S7 1636 aa28.08■■■□□ 2.09
SMG1-203ENST00000532700 MYO3AQ8NEV4 1616 aa28.07■■■□□ 2.08
SMG1-203ENST00000532700 PTPRKQ15262 1439 aa28.06■■■□□ 2.08
SMG1-203ENST00000532700 NPATQ14207 1427 aa28.05■■■□□ 2.08
SMG1-203ENST00000532700 KIF3BO15066 747 aa28.03■■■□□ 2.08
SMG1-203ENST00000532700 RSPH4AQ5TD94 716 aa28.03■■■□□ 2.08
SMG1-203ENST00000532700 ZNF142P52746 1687 aaPredicted RBP28.02■■■□□ 2.08
SMG1-203ENST00000532700 RNF17Q9BXT8 1623 aaKnown RBP28.01■■■□□ 2.07
SMG1-203ENST00000532700 MROH1Q8NDA8 1641 aa28■■■□□ 2.07
SMG1-203ENST00000532700 FGD6Q6ZV73 1430 aa28■■■□□ 2.07
SMG1-203ENST00000532700 KDM5DQ9BY66 1539 aa27.99■■■□□ 2.07
SMG1-203ENST00000532700 ABCC5O15440 1437 aa27.99■■■□□ 2.07
SMG1-203ENST00000532700 DNMT1P26358 1616 aaKnown RBP27.99■■■□□ 2.07
SMG1-203ENST00000532700 TCOF1Q13428 1488 aaKnown RBP27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms