RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 ADAMTSL3P82987 1691 aa25.57■■□□□ 1.68
LDLRAD3-205ENST00000532490 MAGI2Q86UL8 1455 aa25.56■■□□□ 1.68
LDLRAD3-205ENST00000532490 YEATS2Q9ULM3 1422 aa25.55■■□□□ 1.68
LDLRAD3-205ENST00000532490 CDC42BPBQ9Y5S2 1711 aa25.54■■□□□ 1.68
LDLRAD3-205ENST00000532490 ARHGAP5Q13017 1502 aa25.54■■□□□ 1.68
LDLRAD3-205ENST00000532490 BCORL1Q5H9F3 1711 aa25.54■■□□□ 1.68
LDLRAD3-205ENST00000532490 ZFYVE16Q7Z3T8 1539 aa25.53■■□□□ 1.68
LDLRAD3-205ENST00000532490 CEP162Q5TB80 1403 aa25.51■■□□□ 1.67
LDLRAD3-205ENST00000532490 PREX2Q70Z35 1606 aa25.5■■□□□ 1.67
LDLRAD3-205ENST00000532490 ARID4BQ4LE39 1312 aaPredicted RBP25.49■■□□□ 1.67
LDLRAD3-205ENST00000532490 SIGLEC1Q9BZZ2 1709 aa25.49■■□□□ 1.67
LDLRAD3-205ENST00000532490 PTPRMP28827 1452 aa25.47■■□□□ 1.67
LDLRAD3-205ENST00000532490 ZNF518AQ6AHZ1 1483 aa25.46■■□□□ 1.67
LDLRAD3-205ENST00000532490 CDC42BPAQ5VT25 1732 aa25.46■■□□□ 1.67
LDLRAD3-205ENST00000532490 KDM5CP41229 1560 aa25.45■■□□□ 1.66
LDLRAD3-205ENST00000532490 AFAP1Q8N556 730 aa25.45■■□□□ 1.66
LDLRAD3-205ENST00000532490 MADDQ8WXG6 1647 aa25.44■■□□□ 1.66
LDLRAD3-205ENST00000532490 LOC105371045A0A1W2PR82 267 aa25.43■■□□□ 1.66
LDLRAD3-205ENST00000532490 HECW2Q9P2P5 1572 aa25.43■■□□□ 1.66
LDLRAD3-205ENST00000532490 ARHGEF12Q9NZN5 1544 aa25.42■■□□□ 1.66
LDLRAD3-205ENST00000532490 ATP10AO60312 1499 aa25.41■■□□□ 1.66
LDLRAD3-205ENST00000532490 ABCC1P33527 1531 aa25.41■■□□□ 1.66
LDLRAD3-205ENST00000532490 GPATCH8Q9UKJ3 1502 aaKnown RBP25.41■■□□□ 1.66
LDLRAD3-205ENST00000532490 TRAPPC8Q9Y2L5 1435 aa25.38■■□□□ 1.65
LDLRAD3-205ENST00000532490 C9orf84Q5VXU9 1444 aa25.37■■□□□ 1.65
LDLRAD3-205ENST00000532490 ITSN2Q9NZM3 1697 aa25.37■■□□□ 1.65
LDLRAD3-205ENST00000532490 MLH3Q9UHC1 1453 aa25.36■■□□□ 1.65
LDLRAD3-205ENST00000532490 MTUS2Q5JR59 1369 aa25.35■■□□□ 1.65
LDLRAD3-205ENST00000532490 RIMS1Q86UR5 1692 aaKnown RBP25.34■■□□□ 1.65
LDLRAD3-205ENST00000532490 SAMD9LQ8IVG5 1584 aa25.34■■□□□ 1.65
LDLRAD3-205ENST00000532490 DIP2CQ9Y2E4 1556 aa25.32■■□□□ 1.64
LDLRAD3-205ENST00000532490 CCNB3Q8WWL7 1395 aa25.31■■□□□ 1.64
LDLRAD3-205ENST00000532490 MLECQ14165 292 aa25.3■■□□□ 1.64
LDLRAD3-205ENST00000532490 ZNF777Q9ULD5 760 aaPredicted RBP25.3■■□□□ 1.64
LDLRAD3-205ENST00000532490 EHBP1L1Q8N3D4 1523 aa25.3■■□□□ 1.64
LDLRAD3-205ENST00000532490 REREQ9P2R6 1566 aa25.29■■□□□ 1.64
LDLRAD3-205ENST00000532490 ABCA6Q8N139 1617 aa25.29■■□□□ 1.64
LDLRAD3-205ENST00000532490 CFDP1Q9UEE9 299 aaPredicted RBP25.28■■□□□ 1.64
LDLRAD3-205ENST00000532490 KIDINS220Q9ULH0 1771 aa25.27■■□□□ 1.64
LDLRAD3-205ENST00000532490 MYT1LQ9UL68 1186 aa25.26■■□□□ 1.63
LDLRAD3-205ENST00000532490 KIAA1107Q9UPP5 1409 aa25.26■■□□□ 1.63
LDLRAD3-205ENST00000532490 SYCP2Q9BX26 1530 aa25.26■■□□□ 1.63
LDLRAD3-205ENST00000532490 HNRNPMP52272 730 aaKnown RBP eCLIP25.25■■□□□ 1.63
LDLRAD3-205ENST00000532490 TIAM1Q13009 1591 aa25.25■■□□□ 1.63
LDLRAD3-205ENST00000532490 FER1L4A9Z1Z3 1794 aa25.25■■□□□ 1.63
LDLRAD3-205ENST00000532490 VPS8Q8N3P4 1428 aa25.24■■□□□ 1.63
LDLRAD3-205ENST00000532490 PLEKHH2Q8IVE3 1493 aa25.22■■□□□ 1.63
LDLRAD3-205ENST00000532490 AGLP35573 1532 aa25.21■■□□□ 1.63
LDLRAD3-205ENST00000532490 LMTK3Q96Q04 1460 aa25.19■■□□□ 1.62
LDLRAD3-205ENST00000532490 ZNF644Q9H582 1327 aaPredicted RBP25.18■■□□□ 1.62
LDLRAD3-205ENST00000532490 SPAG9O60271 1321 aaKnown RBP25.17■■□□□ 1.62
LDLRAD3-205ENST00000532490 NCOA2Q15596 1464 aa25.16■■□□□ 1.62
LDLRAD3-205ENST00000532490 MBD5Q9P267 1494 aa25.15■■□□□ 1.62
LDLRAD3-205ENST00000532490 SUPT6HQ7KZ85 1726 aaKnown RBP25.15■■□□□ 1.62
LDLRAD3-205ENST00000532490 PLPPR3Q6T4P5 718 aa25.14■■□□□ 1.62
LDLRAD3-205ENST00000532490 INO80Q9ULG1 1556 aaPredicted RBP25.14■■□□□ 1.61
LDLRAD3-205ENST00000532490 ATP7AQ04656 1500 aa25.13■■□□□ 1.61
LDLRAD3-205ENST00000532490 LRRC9Q6ZRR7 1453 aa25.12■■□□□ 1.61
LDLRAD3-205ENST00000532490 MAP3K1Q13233 1512 aa25.11■■□□□ 1.61
LDLRAD3-205ENST00000532490 CEBPAP49715 358 aaPredicted RBP25.1■■□□□ 1.61
LDLRAD3-205ENST00000532490 KANK4Q5T7N3 995 aaPredicted RBP25.07■■□□□ 1.6
LDLRAD3-205ENST00000532490 PLXNC1O60486 1568 aa25.06■■□□□ 1.6
LDLRAD3-205ENST00000532490 A2MP01023 1474 aa25.04■■□□□ 1.6
LDLRAD3-205ENST00000532490 RTEL1-TNFRSF6BF6WH68 1400 aa25.03■■□□□ 1.6
LDLRAD3-205ENST00000532490 CAMSAP2Q08AD1 1489 aa25.03■■□□□ 1.6
LDLRAD3-205ENST00000532490 HSPA2P54652 639 aa25.03■■□□□ 1.6
LDLRAD3-205ENST00000532490 C3P01024 1663 aa25.01■■□□□ 1.59
LDLRAD3-205ENST00000532490 SETD1BQ9UPS6 1966 aaKnown RBP25■■□□□ 1.59
LDLRAD3-205ENST00000532490 PREX1Q8TCU6 1659 aa25■■□□□ 1.59
LDLRAD3-205ENST00000532490 RSPH4AQ5TD94 716 aa24.99■■□□□ 1.59
LDLRAD3-205ENST00000532490 CCDC141Q6ZP82 1450 aa24.99■■□□□ 1.59
LDLRAD3-205ENST00000532490 ADGBQ8N7X0 1667 aa24.99■■□□□ 1.59
LDLRAD3-205ENST00000532490 CNTLNQ9NXG0 1405 aa24.99■■□□□ 1.59
LDLRAD3-205ENST00000532490 ESF1Q9H501 851 aaKnown RBP24.98■■□□□ 1.59
LDLRAD3-205ENST00000532490 ARHGEF5Q12774 1597 aa24.96■■□□□ 1.59
LDLRAD3-205ENST00000532490 MROH2AA6NES4 1674 aa24.94■■□□□ 1.58
LDLRAD3-205ENST00000532490 DHX29Q7Z478 1369 aaKnown RBP24.93■■□□□ 1.58
LDLRAD3-205ENST00000532490 ILDR1Q86SU0 546 aaPredicted RBP24.93■■□□□ 1.58
LDLRAD3-205ENST00000532490 MYOM3Q5VTT5 1437 aa24.92■■□□□ 1.58
LDLRAD3-205ENST00000532490 ZMYM3Q14202 1370 aa24.92■■□□□ 1.58
LDLRAD3-205ENST00000532490 UHRF1BP1Q6BDS2 1440 aa24.91■■□□□ 1.58
LDLRAD3-205ENST00000532490 MIA2Q96PC5 1412 aa24.91■■□□□ 1.58
LDLRAD3-205ENST00000532490 GGT6Q6P531 493 aa24.9■■□□□ 1.58
LDLRAD3-205ENST00000532490 PPP6R1Q9UPN7 881 aa24.89■■□□□ 1.58
LDLRAD3-205ENST00000532490 CLTCQ00610 1675 aaKnown RBP24.88■■□□□ 1.57
LDLRAD3-205ENST00000532490 TSPY4P0CV99 314 aa24.86■■□□□ 1.57
LDLRAD3-205ENST00000532490 TSPY10P0CW01 314 aa24.86■■□□□ 1.57
LDLRAD3-205ENST00000532490 NPATQ14207 1427 aa24.86■■□□□ 1.57
LDLRAD3-205ENST00000532490 APLP2Q06481 763 aa24.85■■□□□ 1.57
LDLRAD3-205ENST00000532490 MAST1Q9Y2H9 1570 aa24.84■■□□□ 1.57
LDLRAD3-205ENST00000532490 STRCQ7RTU9 1775 aa24.82■■□□□ 1.56
LDLRAD3-205ENST00000532490 KIF3BO15066 747 aa24.81■■□□□ 1.56
LDLRAD3-205ENST00000532490 PTPRKQ15262 1439 aa24.8■■□□□ 1.56
LDLRAD3-205ENST00000532490 PTPN23Q9H3S7 1636 aa24.75■■□□□ 1.55
LDLRAD3-205ENST00000532490 FAM135AQ9P2D6 1515 aa24.74■■□□□ 1.55
LDLRAD3-205ENST00000532490 ABCC5O15440 1437 aa24.72■■□□□ 1.55
LDLRAD3-205ENST00000532490 FGD6Q6ZV73 1430 aa24.72■■□□□ 1.55
LDLRAD3-205ENST00000532490 DMRT2Q9Y5R5 561 aa24.72■■□□□ 1.55
LDLRAD3-205ENST00000532490 KDM5DQ9BY66 1539 aa24.71■■□□□ 1.55
LDLRAD3-205ENST00000532490 TCOF1Q13428 1488 aaKnown RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms