RNA–Protein interactions for RNA: ENST00000532117.1

RNPC3-207, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 3

Gene RNPC3, Length 237 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-207ENST00000532117 POTEMA6NI47 508 aa12.65□□□□□ -0.38
RNPC3-207ENST00000532117 C2orf72A6NCS6 295 aa12.64□□□□□ -0.39
RNPC3-207ENST00000532117 HOXB3P14651 431 aaPredicted RBP12.64□□□□□ -0.39
RNPC3-207ENST00000532117 TMC2Q8TDI7 906 aa12.64□□□□□ -0.39
RNPC3-207ENST00000532117 KIF3CO14782 793 aa12.63□□□□□ -0.39
RNPC3-207ENST00000532117 DOK7Q18PE1 504 aa12.63□□□□□ -0.39
RNPC3-207ENST00000532117 ZNF710Q8N1W2 664 aa12.6□□□□□ -0.39
RNPC3-207ENST00000532117 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.59□□□□□ -0.39
RNPC3-207ENST00000532117 RIMBP2O15034 1052 aa12.57□□□□□ -0.4
RNPC3-207ENST00000532117 GPHNQ9NQX3 736 aaPredicted RBP12.55□□□□□ -0.4
RNPC3-207ENST00000532117 MARVELD3Q96A59 401 aa12.54□□□□□ -0.4
RNPC3-207ENST00000532117 SPRYD3Q8NCJ5 442 aa12.53□□□□□ -0.4
RNPC3-207ENST00000532117 HOXB1P14653 301 aaPredicted RBP12.52□□□□□ -0.41
RNPC3-207ENST00000532117 ZSWIM6Q9HCJ5 1215 aa12.52□□□□□ -0.41
RNPC3-207ENST00000532117 EMP3P54852 163 aa12.5□□□□□ -0.41
RNPC3-207ENST00000532117 FOXK1P85037 733 aa12.5□□□□□ -0.41
RNPC3-207ENST00000532117 CRISPLD2Q9H0B8 497 aa12.49□□□□□ -0.41
RNPC3-207ENST00000532117 PDE4AP27815 886 aa12.48□□□□□ -0.41
RNPC3-207ENST00000532117 DSG2Q14126 1118 aa12.47□□□□□ -0.41
RNPC3-207ENST00000532117 GPR153Q6NV75 609 aa12.47□□□□□ -0.41
RNPC3-207ENST00000532117 PAXIP1Q6ZW49 1069 aaPredicted RBP12.47□□□□□ -0.41
RNPC3-207ENST00000532117 PLPP6Q8IY26 295 aa12.47□□□□□ -0.41
RNPC3-207ENST00000532117 NCKAP5LQ9HCH0 1330 aa12.46□□□□□ -0.41
RNPC3-207ENST00000532117 SLC34A2O95436 690 aa12.46□□□□□ -0.41
RNPC3-207ENST00000532117 CFAP44Q96MT7 982 aa12.46□□□□□ -0.41
RNPC3-207ENST00000532117 PCDH10Q9P2E7 1040 aa12.46□□□□□ -0.41
RNPC3-207ENST00000532117 ARSIQ5FYB1 569 aa12.44□□□□□ -0.42
RNPC3-207ENST00000532117 CADPS2Q86UW7 1296 aa12.43□□□□□ -0.42
RNPC3-207ENST00000532117 FAM205CA6NFA0 338 aa12.42□□□□□ -0.42
RNPC3-207ENST00000532117 LARP6Q9BRS8 491 aaKnown RBP12.41□□□□□ -0.42
RNPC3-207ENST00000532117 PPP1R15BQ5SWA1 713 aa12.4□□□□□ -0.42
RNPC3-207ENST00000532117 CDAN1Q8IWY9 1227 aa12.4□□□□□ -0.42
RNPC3-207ENST00000532117 PCDHGA4Q9Y5G9 962 aa12.4□□□□□ -0.42
RNPC3-207ENST00000532117 KHSRPQ92945 711 aaKnown RBP eCLIP12.39□□□□□ -0.432e-6■■□□□ 13.8
RNPC3-207ENST00000532117 HS3ST6Q96QI5 342 aa12.39□□□□□ -0.43
RNPC3-207ENST00000532117 ERBB3P21860 1342 aa12.38□□□□□ -0.43
RNPC3-207ENST00000532117 DDX27Q96GQ7 796 aaKnown RBP12.38□□□□□ -0.43
RNPC3-207ENST00000532117 PTCD2Q8WV60 388 aaKnown RBP12.37□□□□□ -0.43
RNPC3-207ENST00000532117 POTEB3A0JP26 581 aa12.36□□□□□ -0.43
RNPC3-207ENST00000532117 POTEBQ6S5H4 581 aa12.36□□□□□ -0.43
RNPC3-207ENST00000532117 MFSD10Q14728 455 aa12.35□□□□□ -0.43
RNPC3-207ENST00000532117 NUDT7P0C024 238 aa12.34□□□□□ -0.43
RNPC3-207ENST00000532117 TBC1D12O60347 775 aa12.33□□□□□ -0.44
RNPC3-207ENST00000532117 VARS2Q5ST30 1063 aaKnown RBP12.33□□□□□ -0.44
RNPC3-207ENST00000532117 ZNF316A6NFI3 1004 aaPredicted RBP12.31□□□□□ -0.44
RNPC3-207ENST00000532117 OXER1Q8TDS5 423 aa12.3□□□□□ -0.44
RNPC3-207ENST00000532117 UPF1Q92900 1129 aaKnown RBP eCLIP12.29□□□□□ -0.44
RNPC3-207ENST00000532117 LHX6Q9UPM6 363 aa12.27□□□□□ -0.45
RNPC3-207ENST00000532117 KDM4FA0A1W2PPD8 638 aa12.26□□□□□ -0.45
RNPC3-207ENST00000532117 ZNF687Q8N1G0 1237 aa12.23□□□□□ -0.45
RNPC3-207ENST00000532117 EMILIN3Q9NT22 766 aa12.22□□□□□ -0.45
RNPC3-207ENST00000532117 KRTAP3-3Q9BYR6 98 aa12.2□□□□□ -0.46
RNPC3-207ENST00000532117 KRTAP3-2Q9BYR7 98 aa12.2□□□□□ -0.46
RNPC3-207ENST00000532117 TSHZ2Q9NRE2 1034 aa12.2□□□□□ -0.46
RNPC3-207ENST00000532117 PLSCR2Q9NRY7 297 aa12.2□□□□□ -0.46
RNPC3-207ENST00000532117 PSDA5PKW4 1024 aaPredicted RBP12.19□□□□□ -0.46
RNPC3-207ENST00000532117 MAP3K9P80192 1104 aa12.19□□□□□ -0.46
RNPC3-207ENST00000532117 CAMK2BQ13554 666 aa12.19□□□□□ -0.46
RNPC3-207ENST00000532117 WDR70Q9NW82 654 aa12.17□□□□□ -0.46
RNPC3-207ENST00000532117 PLCB2Q00722 1185 aa12.16□□□□□ -0.46
RNPC3-207ENST00000532117 EVI5O60447 810 aa12.15□□□□□ -0.46
RNPC3-207ENST00000532117 ANO8Q9HCE9 1232 aaPredicted RBP12.14□□□□□ -0.47
RNPC3-207ENST00000532117 E2F4Q16254 413 aa12.11□□□□□ -0.47
RNPC3-207ENST00000532117 PPP4R3BQ5MIZ7 849 aa12.11□□□□□ -0.47
RNPC3-207ENST00000532117 DPYSL4O14531 572 aa12.1□□□□□ -0.47
RNPC3-207ENST00000532117 PBX2P40425 430 aa12.1□□□□□ -0.47
RNPC3-207ENST00000532117 SPNS2Q8IVW8 549 aa12.09□□□□□ -0.47
RNPC3-207ENST00000532117 ZNF454Q8N9F8 522 aa12.08□□□□□ -0.48
RNPC3-207ENST00000532117 AXIN2Q9Y2T1 843 aa12.07□□□□□ -0.48
RNPC3-207ENST00000532117 FOSBP53539 338 aa12.06□□□□□ -0.48
RNPC3-207ENST00000532117 POTEEQ6S8J3 1075 aa12.06□□□□□ -0.48
RNPC3-207ENST00000532117 ARHGAP33O14559 1287 aa12.05□□□□□ -0.48
RNPC3-207ENST00000532117 JPH4Q96JJ6 628 aa12.05□□□□□ -0.48
RNPC3-207ENST00000532117 LSM11P83369 360 aaKnown RBP eCLIP12.03□□□□□ -0.48
RNPC3-207ENST00000532117 ANKRD13DQ6ZTN6 518 aa12.03□□□□□ -0.48
RNPC3-207ENST00000532117 ARIH1Q9Y4X5 557 aaPredicted RBP12.01□□□□□ -0.49
RNPC3-207ENST00000532117 ZDHHC16Q969W1 377 aa12□□□□□ -0.49
RNPC3-207ENST00000532117 PSEN2P49810 448 aa11.99□□□□□ -0.49
RNPC3-207ENST00000532117 MMRN1Q13201 1228 aa11.99□□□□□ -0.49
RNPC3-207ENST00000532117 PDIA6Q15084 440 aa11.99□□□□□ -0.49
RNPC3-207ENST00000532117 PCDHGA10Q9Y5H3 936 aa11.99□□□□□ -0.49
RNPC3-207ENST00000532117 SPDYE16A6NNV3 312 aaPredicted RBP11.98□□□□□ -0.49
RNPC3-207ENST00000532117 HAP1P54257 671 aaPredicted RBP11.98□□□□□ -0.49
RNPC3-207ENST00000532117 KCNH8Q96L42 1107 aa11.98□□□□□ -0.49
RNPC3-207ENST00000532117 BCL2L12Q9HB09 334 aa11.98□□□□□ -0.49
RNPC3-207ENST00000532117 PHF14O94880 888 aa11.97□□□□□ -0.49
RNPC3-207ENST00000532117 PTGER2P43116 358 aa11.97□□□□□ -0.49
RNPC3-207ENST00000532117 KCNK17Q96T54 332 aa11.97□□□□□ -0.49
RNPC3-207ENST00000532117 ADAM33Q9BZ11 813 aa11.96□□□□□ -0.49
RNPC3-207ENST00000532117 DMRTA1Q5VZB9 504 aa11.95□□□□□ -0.5
RNPC3-207ENST00000532117 PTPREP23469 700 aa11.94□□□□□ -0.5
RNPC3-207ENST00000532117 TYW1BQ6NUM6 668 aa11.94□□□□□ -0.5
RNPC3-207ENST00000532117 FBXW7Q969H0 707 aa11.94□□□□□ -0.5
RNPC3-207ENST00000532117 DDX12PQ92771 950 aa11.93□□□□□ -0.5
RNPC3-207ENST00000532117 EPAS1Q99814 870 aa11.93□□□□□ -0.5
RNPC3-207ENST00000532117 ADGRD1Q6QNK2 874 aa11.92□□□□□ -0.5
RNPC3-207ENST00000532117 TK2O00142 265 aa11.91□□□□□ -0.5
RNPC3-207ENST00000532117 KCNV2Q8TDN2 545 aa11.91□□□□□ -0.5
RNPC3-207ENST00000532117 ARHGEF1Q92888 912 aaKnown RBP11.91□□□□□ -0.5
RNPC3-207ENST00000532117 MYT1LQ9UL68 1186 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms