RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 POTEBQ6S5H4 581 aa10.35□□□□□ -0.75
ATM-217ENST00000531957 MS4A4AQ96JQ5 239 aa10.35□□□□□ -0.75
ATM-217ENST00000531957 ERBB3P21860 1342 aa10.34□□□□□ -0.75
ATM-217ENST00000531957 BCL11BQ9C0K0 894 aaPredicted RBP10.33□□□□□ -0.76
ATM-217ENST00000531957 TMEM92Q6UXU6 159 aa10.31□□□□□ -0.76
ATM-217ENST00000531957 RGL2O15211 777 aa10.29□□□□□ -0.76
ATM-217ENST00000531957 STK24Q9Y6E0 443 aa10.29□□□□□ -0.76
ATM-217ENST00000531957 STK25O00506 426 aa10.27□□□□□ -0.77
ATM-217ENST00000531957 VARS2Q5ST30 1063 aaKnown RBP10.27□□□□□ -0.77
ATM-217ENST00000531957 FBXO22Q8NEZ5 403 aa10.26□□□□□ -0.77
ATM-217ENST00000531957 GPR153Q6NV75 609 aa10.22□□□□□ -0.77
ATM-217ENST00000531957 MFRPQ9BY79 579 aa10.22□□□□□ -0.77
ATM-217ENST00000531957 ZNF687Q8N1G0 1237 aa10.2□□□□□ -0.78
ATM-217ENST00000531957 PTGER2P43116 358 aa10.18□□□□□ -0.78
ATM-217ENST00000531957 RNF166Q96A37 237 aaPredicted RBP10.17□□□□□ -0.78
ATM-217ENST00000531957 ARSIQ5FYB1 569 aa10.15□□□□□ -0.78
ATM-217ENST00000531957 ZNF316A6NFI3 1004 aaPredicted RBP10.14□□□□□ -0.79
ATM-217ENST00000531957 KIF3CO14782 793 aa10.14□□□□□ -0.79
ATM-217ENST00000531957 MYT1LQ9UL68 1186 aa10.13□□□□□ -0.79
ATM-217ENST00000531957 C2orf72A6NCS6 295 aa10.12□□□□□ -0.79
ATM-217ENST00000531957 TMC2Q8TDI7 906 aa10.12□□□□□ -0.79
ATM-217ENST00000531957 SLC34A2O95436 690 aa10.08□□□□□ -0.8
ATM-217ENST00000531957 PBX2P40425 430 aa10.08□□□□□ -0.8
ATM-217ENST00000531957 KHSRPQ92945 711 aaKnown RBP eCLIP10.07□□□□□ -0.8
ATM-217ENST00000531957 NUDT7P0C024 238 aa10.05□□□□□ -0.8
ATM-217ENST00000531957 CHGAP10645 457 aaKnown RBP10.04□□□□□ -0.8
ATM-217ENST00000531957 LSM11P83369 360 aaKnown RBP eCLIP10.04□□□□□ -0.8
ATM-217ENST00000531957 PCDHGA4Q9Y5G9 962 aa10.04□□□□□ -0.8
ATM-217ENST00000531957 ANKRD13DQ6ZTN6 518 aa10.03□□□□□ -0.8
ATM-217ENST00000531957 PSDA5PKW4 1024 aaPredicted RBP10.02□□□□□ -0.81
ATM-217ENST00000531957 HS6ST3Q8IZP7 471 aa10.02□□□□□ -0.81
ATM-217ENST00000531957 DCAF8L2P0C7V8 631 aa10.01□□□□□ -0.81
ATM-217ENST00000531957 LHX6Q9UPM6 363 aa10□□□□□ -0.81
ATM-217ENST00000531957 PPP1R37O75864 691 aa9.97□□□□□ -0.81
ATM-217ENST00000531957 FOXK1P85037 733 aa9.94□□□□□ -0.82
ATM-217ENST00000531957 PTCD2Q8WV60 388 aaKnown RBP9.94□□□□□ -0.82
ATM-217ENST00000531957 RTN4Q9NQC3 1192 aaKnown RBP9.94□□□□□ -0.82
ATM-217ENST00000531957 RYDENQ9NUL5 291 aaKnown RBP9.94□□□□□ -0.82
ATM-217ENST00000531957 NKX1-1Q15270 411 aaPredicted RBP9.93□□□□□ -0.82
ATM-217ENST00000531957 GPHNQ9NQX3 736 aaPredicted RBP9.92□□□□□ -0.82
ATM-217ENST00000531957 TBC1D12O60347 775 aa9.91□□□□□ -0.82
ATM-217ENST00000531957 AMER1Q5JTC6 1135 aaPredicted RBP9.91□□□□□ -0.82
ATM-217ENST00000531957 PLPP6Q8IY26 295 aa9.91□□□□□ -0.82
ATM-217ENST00000531957 ARHGAP33O14559 1287 aa9.9□□□□□ -0.82
ATM-217ENST00000531957 PPP4R3BQ5MIZ7 849 aa9.89□□□□□ -0.83
ATM-217ENST00000531957 POTEEQ6S8J3 1075 aa9.89□□□□□ -0.83
ATM-217ENST00000531957 AXIN2Q9Y2T1 843 aa9.89□□□□□ -0.83
ATM-217ENST00000531957 ADGRD1Q6QNK2 874 aa9.88□□□□□ -0.83
ATM-217ENST00000531957 DNAJC5Q9H3Z4 198 aa9.88□□□□□ -0.83
ATM-217ENST00000531957 KCNH8Q96L42 1107 aa9.87□□□□□ -0.83
ATM-217ENST00000531957 KDM4FA0A1W2PPD8 638 aa9.86□□□□□ -0.83
ATM-217ENST00000531957 TK2O00142 265 aa9.86□□□□□ -0.83
ATM-217ENST00000531957 DSG2Q14126 1118 aa9.86□□□□□ -0.83
ATM-217ENST00000531957 HCSTQ9UBK5 93 aa9.84□□□□□ -0.83
ATM-217ENST00000531957 GTPBP6O43824 516 aaPredicted RBP9.78□□□□□ -0.84
ATM-217ENST00000531957 PSEN2P49810 448 aa9.78□□□□□ -0.84
ATM-217ENST00000531957 OXER1Q8TDS5 423 aa9.78□□□□□ -0.84
ATM-217ENST00000531957 STAC3Q96MF2 364 aa9.78□□□□□ -0.84
ATM-217ENST00000531957 CRISPLD2Q9H0B8 497 aa9.78□□□□□ -0.84
ATM-217ENST00000531957 HRO43593 1189 aa9.77□□□□□ -0.85
ATM-217ENST00000531957 PPP1R15BQ5SWA1 713 aa9.77□□□□□ -0.85
ATM-217ENST00000531957 DMRTA1Q5VZB9 504 aa9.77□□□□□ -0.85
ATM-217ENST00000531957 PLA2G2EQ9NZK7 142 aa9.77□□□□□ -0.85
ATM-217ENST00000531957 KCNK17Q96T54 332 aa9.76□□□□□ -0.85
ATM-217ENST00000531957 UPF1Q92900 1129 aaKnown RBP eCLIP9.75□□□□□ -0.85
ATM-217ENST00000531957 PDE4AP27815 886 aa9.73□□□□□ -0.85
ATM-217ENST00000531957 ZNF454Q8N9F8 522 aa9.73□□□□□ -0.85
ATM-217ENST00000531957 BCL2L12Q9HB09 334 aa9.72□□□□□ -0.85
ATM-217ENST00000531957 KCTD12Q96CX2 325 aaKnown RBP9.7□□□□□ -0.86
ATM-217ENST00000531957 JPH4Q96JJ6 628 aa9.69□□□□□ -0.86
ATM-217ENST00000531957 SLC4A5Q9BY07 1137 aa9.69□□□□□ -0.86
ATM-217ENST00000531957 NCKAP5LQ9HCH0 1330 aa9.68□□□□□ -0.86
ATM-217ENST00000531957 PTPREP23469 700 aa9.68□□□□□ -0.86
ATM-217ENST00000531957 FOSBP53539 338 aa9.68□□□□□ -0.86
ATM-217ENST00000531957 BBXQ8WY36 941 aaPredicted RBP9.68□□□□□ -0.86
ATM-217ENST00000531957 VPS9D1Q9Y2B5 631 aa9.68□□□□□ -0.86
ATM-217ENST00000531957 DDX27Q96GQ7 796 aaKnown RBP9.67□□□□□ -0.86
ATM-217ENST00000531957 EVI5O60447 810 aa9.64□□□□□ -0.87
ATM-217ENST00000531957 MFSD10Q14728 455 aa9.63□□□□□ -0.87
ATM-217ENST00000531957 ZDHHC16Q969W1 377 aa9.63□□□□□ -0.87
ATM-217ENST00000531957 ANO8Q9HCE9 1232 aaPredicted RBP9.63□□□□□ -0.87
ATM-217ENST00000531957 CADPS2Q86UW7 1296 aa9.62□□□□□ -0.87
ATM-217ENST00000531957 LARP6Q9BRS8 491 aaKnown RBP9.62□□□□□ -0.87
ATM-217ENST00000531957 NBPF3Q9H094 633 aa9.62□□□□□ -0.87
ATM-217ENST00000531957 GOLGA8CPA6NN73 597 aa9.61□□□□□ -0.87
ATM-217ENST00000531957 MAP3K9P80192 1104 aa9.6□□□□□ -0.87
ATM-217ENST00000531957 MRPL50Q8N5N7 158 aaKnown RBP9.6□□□□□ -0.87
ATM-217ENST00000531957 ZBED2Q9BTP6 218 aa9.6□□□□□ -0.87
ATM-217ENST00000531957 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.59□□□□□ -0.87
ATM-217ENST00000531957 BHMG1C9JSJ3 638 aaPredicted RBP9.58□□□□□ -0.88
ATM-217ENST00000531957 THSD4Q6ZMP0 1018 aa9.58□□□□□ -0.88
ATM-217ENST00000531957 PAXIP1Q6ZW49 1069 aaPredicted RBP9.58□□□□□ -0.88
ATM-217ENST00000531957 SPRYD3Q8NCJ5 442 aa9.58□□□□□ -0.88
ATM-217ENST00000531957 CFAP44Q96MT7 982 aa9.58□□□□□ -0.88
ATM-217ENST00000531957 PTPN5P54829 565 aa9.57□□□□□ -0.88
ATM-217ENST00000531957 ADAM33Q9BZ11 813 aa9.57□□□□□ -0.88
ATM-217ENST00000531957 PPP1R3GB7ZBB8 358 aa9.56□□□□□ -0.88
ATM-217ENST00000531957 WNT2BQ93097 391 aa9.56□□□□□ -0.88
ATM-217ENST00000531957 IFFO2Q5TF58 517 aa9.55□□□□□ -0.88
ATM-217ENST00000531957 FBXW7Q969H0 707 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms