RNA–Protein interactions for RNA: ENST00000530451.1

SYVN1-212, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-212ENST00000530451 ZFYVE16Q7Z3T8 1539 aa31.32■■■□□ 2.6
SYVN1-212ENST00000530451 YEATS2Q9ULM3 1422 aa31.32■■■□□ 2.6
SYVN1-212ENST00000530451 SIGLEC1Q9BZZ2 1709 aa31.31■■■□□ 2.6
SYVN1-212ENST00000530451 CLIP1P30622 1438 aa31.31■■■□□ 2.6
SYVN1-212ENST00000530451 EFCAB2Q5VUJ9 269 aa31.3■■■□□ 2.6
SYVN1-212ENST00000530451 CASKIN1Q8WXD9 1431 aa31.3■■■□□ 2.6
SYVN1-212ENST00000530451 RIMS1Q86UR5 1692 aaKnown RBP31.29■■■□□ 2.6
SYVN1-212ENST00000530451 ARHGAP5Q13017 1502 aa31.28■■■□□ 2.6
SYVN1-212ENST00000530451 POGZQ7Z3K3 1410 aa31.27■■■□□ 2.6
SYVN1-212ENST00000530451 CDC42BPBQ9Y5S2 1711 aa31.27■■■□□ 2.6
SYVN1-212ENST00000530451 CCDC18Q5T9S5 1454 aa31.24■■■□□ 2.59
SYVN1-212ENST00000530451 MAGI2Q86UL8 1455 aa31.22■■■□□ 2.59
SYVN1-212ENST00000530451 MLECQ14165 292 aa31.18■■■□□ 2.58
SYVN1-212ENST00000530451 FYCO1Q9BQS8 1478 aa31.18■■■□□ 2.58
SYVN1-212ENST00000530451 PREX2Q70Z35 1606 aa31.17■■■□□ 2.58
SYVN1-212ENST00000530451 PLPPR3Q6T4P5 718 aa31.17■■■□□ 2.58
SYVN1-212ENST00000530451 CDC42BPAQ5VT25 1732 aa31.15■■■□□ 2.58
SYVN1-212ENST00000530451 FER1L4A9Z1Z3 1794 aa31.14■■■□□ 2.58
SYVN1-212ENST00000530451 AFAP1Q8N556 730 aa31.13■■■□□ 2.57
SYVN1-212ENST00000530451 MYT1LQ9UL68 1186 aa31.12■■■□□ 2.57
SYVN1-212ENST00000530451 ZNF518AQ6AHZ1 1483 aa31.12■■■□□ 2.57
SYVN1-212ENST00000530451 ATP10AO60312 1499 aa31.11■■■□□ 2.57
SYVN1-212ENST00000530451 KDM5CP41229 1560 aa31.09■■■□□ 2.57
SYVN1-212ENST00000530451 ITSN2Q9NZM3 1697 aa31.08■■■□□ 2.57
SYVN1-212ENST00000530451 C9orf84Q5VXU9 1444 aa31.07■■■□□ 2.57
SYVN1-212ENST00000530451 ABCC1P33527 1531 aa31.04■■■□□ 2.56
SYVN1-212ENST00000530451 ILDR1Q86SU0 546 aaPredicted RBP31.04■■■□□ 2.56
SYVN1-212ENST00000530451 ARHGEF12Q9NZN5 1544 aa31.03■■■□□ 2.56
SYVN1-212ENST00000530451 DIP2CQ9Y2E4 1556 aa31.01■■■□□ 2.56
SYVN1-212ENST00000530451 TRAPPC8Q9Y2L5 1435 aa31■■■□□ 2.55
SYVN1-212ENST00000530451 ABCA6Q8N139 1617 aa31■■■□□ 2.55
SYVN1-212ENST00000530451 LMTK3Q96Q04 1460 aa31■■■□□ 2.55
SYVN1-212ENST00000530451 ZNF777Q9ULD5 760 aaPredicted RBP30.99■■■□□ 2.55
SYVN1-212ENST00000530451 SAMD9LQ8IVG5 1584 aa30.95■■■□□ 2.54
SYVN1-212ENST00000530451 MLH3Q9UHC1 1453 aa30.94■■■□□ 2.54
SYVN1-212ENST00000530451 GPATCH8Q9UKJ3 1502 aaKnown RBP30.93■■■□□ 2.54
SYVN1-212ENST00000530451 KIDINS220Q9ULH0 1771 aa30.93■■■□□ 2.54
SYVN1-212ENST00000530451 CEP162Q5TB80 1403 aa30.92■■■□□ 2.54
SYVN1-212ENST00000530451 HSPA2P54652 639 aa30.9■■■□□ 2.54
SYVN1-212ENST00000530451 MTUS2Q5JR59 1369 aa30.9■■■□□ 2.54
SYVN1-212ENST00000530451 SYCP2Q9BX26 1530 aa30.89■■■□□ 2.54
SYVN1-212ENST00000530451 REREQ9P2R6 1566 aa30.88■■■□□ 2.53
SYVN1-212ENST00000530451 CEBPAP49715 358 aaPredicted RBP30.87■■■□□ 2.53
SYVN1-212ENST00000530451 CCNB3Q8WWL7 1395 aa30.86■■■□□ 2.53
SYVN1-212ENST00000530451 HNRNPMP52272 730 aaKnown RBP eCLIP30.85■■■□□ 2.53
SYVN1-212ENST00000530451 CFDP1Q9UEE9 299 aaPredicted RBP30.84■■■□□ 2.53
SYVN1-212ENST00000530451 PREX1Q8TCU6 1659 aa30.81■■■□□ 2.52
SYVN1-212ENST00000530451 EHBP1L1Q8N3D4 1523 aa30.79■■■□□ 2.52
SYVN1-212ENST00000530451 TIAM1Q13009 1591 aa30.79■■■□□ 2.52
SYVN1-212ENST00000530451 SUPT6HQ7KZ85 1726 aaKnown RBP30.78■■■□□ 2.52
SYVN1-212ENST00000530451 LOC105371045A0A1W2PR82 267 aa30.78■■■□□ 2.52
SYVN1-212ENST00000530451 AGLP35573 1532 aa30.78■■■□□ 2.52
SYVN1-212ENST00000530451 C3P01024 1663 aa30.78■■■□□ 2.52
SYVN1-212ENST00000530451 SPAG9O60271 1321 aaKnown RBP30.76■■■□□ 2.52
SYVN1-212ENST00000530451 SETD1BQ9UPS6 1966 aaKnown RBP30.76■■■□□ 2.51
SYVN1-212ENST00000530451 PLEKHH2Q8IVE3 1493 aa30.74■■■□□ 2.51
SYVN1-212ENST00000530451 ESF1Q9H501 851 aaKnown RBP30.73■■■□□ 2.51
SYVN1-212ENST00000530451 ATP7AQ04656 1500 aa30.73■■■□□ 2.51
SYVN1-212ENST00000530451 KIAA1107Q9UPP5 1409 aa30.72■■■□□ 2.51
SYVN1-212ENST00000530451 ZNF644Q9H582 1327 aaPredicted RBP30.72■■■□□ 2.51
SYVN1-212ENST00000530451 INO80Q9ULG1 1556 aaPredicted RBP30.71■■■□□ 2.51
SYVN1-212ENST00000530451 UHRF1BP1Q6BDS2 1440 aa30.63■■■□□ 2.49
SYVN1-212ENST00000530451 NCOA2Q15596 1464 aa30.62■■■□□ 2.49
SYVN1-212ENST00000530451 A2MP01023 1474 aa30.61■■■□□ 2.49
SYVN1-212ENST00000530451 ADGBQ8N7X0 1667 aa30.61■■■□□ 2.49
SYVN1-212ENST00000530451 STRCQ7RTU9 1775 aa30.59■■■□□ 2.49
SYVN1-212ENST00000530451 CLTCQ00610 1675 aaKnown RBP30.59■■■□□ 2.49
SYVN1-212ENST00000530451 PLXNC1O60486 1568 aa30.59■■■□□ 2.49
SYVN1-212ENST00000530451 FBXO41Q8TF61 875 aa30.59■■■□□ 2.49
SYVN1-212ENST00000530451 MBD5Q9P267 1494 aa30.58■■■□□ 2.49
SYVN1-212ENST00000530451 MROH2AA6NES4 1674 aa30.58■■■□□ 2.49
SYVN1-212ENST00000530451 VPS8Q8N3P4 1428 aa30.57■■■□□ 2.48
SYVN1-212ENST00000530451 CNTLNQ9NXG0 1405 aa30.57■■■□□ 2.48
SYVN1-212ENST00000530451 CAMSAP2Q08AD1 1489 aa30.53■■■□□ 2.48
SYVN1-212ENST00000530451 GGT6Q6P531 493 aa30.53■■■□□ 2.48
SYVN1-212ENST00000530451 ZMYM3Q14202 1370 aa30.49■■■□□ 2.47
SYVN1-212ENST00000530451 LRRC9Q6ZRR7 1453 aa30.48■■■□□ 2.47
SYVN1-212ENST00000530451 CCDC141Q6ZP82 1450 aa30.46■■■□□ 2.47
SYVN1-212ENST00000530451 RTEL1-TNFRSF6BF6WH68 1400 aa30.46■■■□□ 2.47
SYVN1-212ENST00000530451 KANK4Q5T7N3 995 aaPredicted RBP30.43■■■□□ 2.46
SYVN1-212ENST00000530451 CERKQ8TCT0 537 aa30.41■■■□□ 2.46
SYVN1-212ENST00000530451 NPATQ14207 1427 aa30.4■■■□□ 2.46
SYVN1-212ENST00000530451 DMRT2Q9Y5R5 561 aa30.4■■■□□ 2.46
SYVN1-212ENST00000530451 DHX29Q7Z478 1369 aaKnown RBP30.4■■■□□ 2.46
SYVN1-212ENST00000530451 ARHGEF5Q12774 1597 aa30.38■■■□□ 2.45
SYVN1-212ENST00000530451 MYO3AQ8NEV4 1616 aa30.36■■■□□ 2.45
SYVN1-212ENST00000530451 RSPH4AQ5TD94 716 aa30.36■■■□□ 2.45
SYVN1-212ENST00000530451 KIF3BO15066 747 aa30.35■■■□□ 2.45
SYVN1-212ENST00000530451 MAP3K1Q13233 1512 aa30.35■■■□□ 2.45
SYVN1-212ENST00000530451 CAMSAP1Q5T5Y3 1602 aa30.35■■■□□ 2.45
SYVN1-212ENST00000530451 PTPRKQ15262 1439 aa30.34■■■□□ 2.45
SYVN1-212ENST00000530451 TSPY4P0CV99 314 aa30.32■■■□□ 2.44
SYVN1-212ENST00000530451 TSPY10P0CW01 314 aa30.32■■■□□ 2.44
SYVN1-212ENST00000530451 NCOA1Q15788 1441 aa30.31■■■□□ 2.44
SYVN1-212ENST00000530451 ZNF142P52746 1687 aaPredicted RBP30.31■■■□□ 2.44
SYVN1-212ENST00000530451 PPP6R1Q9UPN7 881 aa30.31■■■□□ 2.44
SYVN1-212ENST00000530451 PTPRTO14522 1441 aa30.3■■■□□ 2.44
SYVN1-212ENST00000530451 CEP170BQ9Y4F5 1589 aaPredicted RBP30.28■■■□□ 2.44
SYVN1-212ENST00000530451 MYOM3Q5VTT5 1437 aa30.27■■■□□ 2.44
SYVN1-212ENST00000530451 NCKAP5LQ9HCH0 1330 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms