RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 SEC24BO95487 1268 aa13.69□□□□□ -0.22
CASP4-208ENST00000530309 SLC39A7Q92504 469 aa13.69□□□□□ -0.22
CASP4-208ENST00000530309 ARHGEF1Q92888 912 aaKnown RBP13.69□□□□□ -0.22
CASP4-208ENST00000530309 G3V3G9 751 aa13.68□□□□□ -0.22
CASP4-208ENST00000530309 C7P10643 843 aa13.67□□□□□ -0.22
CASP4-208ENST00000530309 PRKCSHP14314 528 aaPredicted RBP13.67□□□□□ -0.22
CASP4-208ENST00000530309 L3MBTL3Q96JM7 780 aaPredicted RBP13.67□□□□□ -0.22
CASP4-208ENST00000530309 COLQQ9Y215 455 aaPredicted RBP13.67□□□□□ -0.22
CASP4-208ENST00000530309 TPRNQ4KMQ1 711 aa13.66□□□□□ -0.22
CASP4-208ENST00000530309 POTEIP0CG38 1075 aa13.64□□□□□ -0.23
CASP4-208ENST00000530309 PPP1R15BQ5SWA1 713 aa13.63□□□□□ -0.23
CASP4-208ENST00000530309 TMC2Q8TDI7 906 aa13.63□□□□□ -0.23
CASP4-208ENST00000530309 CAMK2BQ13554 666 aa13.62□□□□□ -0.23
CASP4-208ENST00000530309 METRNQ9UJH8 293 aa13.61□□□□□ -0.23
CASP4-208ENST00000530309 POTEFA5A3E0 1075 aa13.59□□□□□ -0.23
CASP4-208ENST00000530309 ARIH1Q9Y4X5 557 aaPredicted RBP13.59□□□□□ -0.23
CASP4-208ENST00000530309 DSG2Q14126 1118 aa13.58□□□□□ -0.24
CASP4-208ENST00000530309 FOXK1P85037 733 aa13.57□□□□□ -0.24
CASP4-208ENST00000530309 C2orf72A6NCS6 295 aa13.55□□□□□ -0.24
CASP4-208ENST00000530309 KIF3CO14782 793 aa13.55□□□□□ -0.24
CASP4-208ENST00000530309 SEMA3EO15041 775 aa13.51□□□□□ -0.25
CASP4-208ENST00000530309 PLPP6Q8IY26 295 aa13.5□□□□□ -0.25
CASP4-208ENST00000530309 TULP1O00294 542 aaPredicted RBP13.49□□□□□ -0.25
CASP4-208ENST00000530309 TMEM92Q6UXU6 159 aa13.49□□□□□ -0.25
CASP4-208ENST00000530309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.49□□□□□ -0.25
CASP4-208ENST00000530309 TESPA1A2RU30 521 aaPredicted RBP13.48□□□□□ -0.25
CASP4-208ENST00000530309 EMILIN3Q9NT22 766 aa13.48□□□□□ -0.25
CASP4-208ENST00000530309 C3orf67Q6ZVT6 689 aa13.46□□□□□ -0.25
CASP4-208ENST00000530309 LMOD2Q6P5Q4 547 aa13.45□□□□□ -0.26
CASP4-208ENST00000530309 DPYSL4O14531 572 aa13.43□□□□□ -0.26
CASP4-208ENST00000530309 SMYD5Q6GMV2 418 aa13.4□□□□□ -0.26
CASP4-208ENST00000530309 SPDYE16A6NNV3 312 aaPredicted RBP13.39□□□□□ -0.27
CASP4-208ENST00000530309 PDIA6Q15084 440 aa13.38□□□□□ -0.27
CASP4-208ENST00000530309 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.36□□□□□ -0.27
CASP4-208ENST00000530309 MAP3K9P80192 1104 aa13.35□□□□□ -0.27
CASP4-208ENST00000530309 MLLT3P42568 568 aaPredicted RBP13.33□□□□□ -0.28
CASP4-208ENST00000530309 OXER1Q8TDS5 423 aa13.33□□□□□ -0.28
CASP4-208ENST00000530309 UPF1Q92900 1129 aaKnown RBP eCLIP13.32□□□□□ -0.28
CASP4-208ENST00000530309 TBC1D12O60347 775 aa13.26□□□□□ -0.29
CASP4-208ENST00000530309 SLC34A2O95436 690 aa13.26□□□□□ -0.29
CASP4-208ENST00000530309 ZC3H15Q8WU90 426 aaKnown RBP13.26□□□□□ -0.29
CASP4-208ENST00000530309 PTCD2Q8WV60 388 aaKnown RBP13.26□□□□□ -0.29
CASP4-208ENST00000530309 POTEJP0CG39 1038 aa13.25□□□□□ -0.29
CASP4-208ENST00000530309 RBM26Q5T8P6 1007 aaKnown RBP13.23□□□□□ -0.29
CASP4-208ENST00000530309 POTEB2H3BUK9 544 aa13.22□□□□□ -0.29
CASP4-208ENST00000530309 EVI5O60447 810 aa13.2□□□□□ -0.3
CASP4-208ENST00000530309 GRXCR2A6NFK2 248 aa13.19□□□□□ -0.3
CASP4-208ENST00000530309 PTGER2P43116 358 aa13.19□□□□□ -0.3
CASP4-208ENST00000530309 ZNF316A6NFI3 1004 aaPredicted RBP13.17□□□□□ -0.3
CASP4-208ENST00000530309 LHX8Q68G74 356 aa13.17□□□□□ -0.3
CASP4-208ENST00000530309 MAMSTRQ6ZN01 415 aa13.16□□□□□ -0.3
CASP4-208ENST00000530309 GPIHBP1Q8IV16 184 aa13.16□□□□□ -0.3
CASP4-208ENST00000530309 SCUBE2Q9NQ36 999 aa13.16□□□□□ -0.3
CASP4-208ENST00000530309 ZMYND10O75800 440 aa13.15□□□□□ -0.3
CASP4-208ENST00000530309 ANO8Q9HCE9 1232 aaPredicted RBP13.15□□□□□ -0.3
CASP4-208ENST00000530309 DDX12PQ92771 950 aa13.14□□□□□ -0.31
CASP4-208ENST00000530309 PCDHGA4Q9Y5G9 962 aa13.14□□□□□ -0.31
CASP4-208ENST00000530309 OSBPP22059 807 aa13.13□□□□□ -0.31
CASP4-208ENST00000530309 SLAIN1Q8ND83 568 aa13.13□□□□□ -0.31
CASP4-208ENST00000530309 BARGINQ6ZT62 677 aa13.09□□□□□ -0.31
CASP4-208ENST00000530309 DOK7Q18PE1 504 aa13.08□□□□□ -0.32
CASP4-208ENST00000530309 SLC24A3Q9HC58 644 aa13.07□□□□□ -0.32
CASP4-208ENST00000530309 NUTM2FA1L443 756 aa13.06□□□□□ -0.32
CASP4-208ENST00000530309 HOXB3P14651 431 aaPredicted RBP13.06□□□□□ -0.32
CASP4-208ENST00000530309 KDM4FA0A1W2PPD8 638 aa13.04□□□□□ -0.32
CASP4-208ENST00000530309 RIMBP2O15034 1052 aa13.03□□□□□ -0.32
CASP4-208ENST00000530309 GPR37O15354 613 aa13.03□□□□□ -0.32
CASP4-208ENST00000530309 PHF14O94880 888 aa13.03□□□□□ -0.32
CASP4-208ENST00000530309 EPAS1Q99814 870 aa13.03□□□□□ -0.32
CASP4-208ENST00000530309 ZSWIM6Q9HCJ5 1215 aa13.03□□□□□ -0.32
CASP4-208ENST00000530309 PRIM1P49642 420 aaKnown RBP13.02□□□□□ -0.33
CASP4-208ENST00000530309 KRI1Q8N9T8 703 aaKnown RBP13.01□□□□□ -0.33
CASP4-208ENST00000530309 ARSIQ5FYB1 569 aa13□□□□□ -0.33
CASP4-208ENST00000530309 ZNF710Q8N1W2 664 aa12.99□□□□□ -0.33
CASP4-208ENST00000530309 PCDHGA10Q9Y5H3 936 aa12.99□□□□□ -0.33
CASP4-208ENST00000530309 FCHSD2O94868 740 aa12.98□□□□□ -0.33
CASP4-208ENST00000530309 GPR153Q6NV75 609 aa12.98□□□□□ -0.33
CASP4-208ENST00000530309 NUDT7P0C024 238 aa12.97□□□□□ -0.33
CASP4-208ENST00000530309 TYW1BQ6NUM6 668 aa12.97□□□□□ -0.33
CASP4-208ENST00000530309 KHSRPQ92945 711 aaKnown RBP eCLIP12.97□□□□□ -0.33
CASP4-208ENST00000530309 JPH4Q96JJ6 628 aa12.97□□□□□ -0.33
CASP4-208ENST00000530309 AK7Q96M32 723 aa12.97□□□□□ -0.33
CASP4-208ENST00000530309 SNPHO15079 494 aa12.96□□□□□ -0.33
CASP4-208ENST00000530309 EN1Q05925 392 aaPredicted RBP12.96□□□□□ -0.33
CASP4-208ENST00000530309 FOSBP53539 338 aa12.95□□□□□ -0.34
CASP4-208ENST00000530309 HIC1Q14526 733 aa12.95□□□□□ -0.34
CASP4-208ENST00000530309 FBXW7Q969H0 707 aa12.95□□□□□ -0.34
CASP4-208ENST00000530309 GNPATO15228 680 aa12.94□□□□□ -0.34
CASP4-208ENST00000530309 MAP3K7O43318 606 aa12.94□□□□□ -0.34
CASP4-208ENST00000530309 BRPF1P55201 1214 aaPredicted RBP12.93□□□□□ -0.34
CASP4-208ENST00000530309 PTGDRQ13258 359 aa12.93□□□□□ -0.34
CASP4-208ENST00000530309 RBM33Q96EV2 1170 aaKnown RBP12.93□□□□□ -0.34
CASP4-208ENST00000530309 OTUD5Q96G74 571 aa12.93□□□□□ -0.34
CASP4-208ENST00000530309 MINK1Q8N4C8 1332 aaPredicted RBP12.91□□□□□ -0.34
CASP4-208ENST00000530309 ZNF454Q8N9F8 522 aa12.91□□□□□ -0.34
CASP4-208ENST00000530309 MAP2K5Q13163 448 aa12.9□□□□□ -0.34
CASP4-208ENST00000530309 NEUROD2Q15784 382 aa12.9□□□□□ -0.34
CASP4-208ENST00000530309 ZDHHC16Q969W1 377 aa12.89□□□□□ -0.35
CASP4-208ENST00000530309 CDHR5Q9HBB8 845 aa12.89□□□□□ -0.35
CASP4-208ENST00000530309 NPDC1Q9NQX5 325 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms