RNA–Protein interactions for RNA: ENST00000529974.1

CTSC-206, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-206ENST00000529974 PREX2Q70Z35 1606 aa18.22■□□□□ 0.51
CTSC-206ENST00000529974 CDC42BPBQ9Y5S2 1711 aa18.21■□□□□ 0.51
CTSC-206ENST00000529974 ZFYVE16Q7Z3T8 1539 aa18.2■□□□□ 0.5
CTSC-206ENST00000529974 CDK11AQ9UQ88 783 aaPredicted RBP18.2■□□□□ 0.5
CTSC-206ENST00000529974 MADDQ8WXG6 1647 aa18.19■□□□□ 0.5
CTSC-206ENST00000529974 ARHGAP5Q13017 1502 aa18.18■□□□□ 0.5
CTSC-206ENST00000529974 HECW2Q9P2P5 1572 aa18.18■□□□□ 0.5
CTSC-206ENST00000529974 SCAPERQ9BY12 1400 aa18.18■□□□□ 0.5
CTSC-206ENST00000529974 YEATS2Q9ULM3 1422 aa18.18■□□□□ 0.5
CTSC-206ENST00000529974 CDC42BPAQ5VT25 1732 aa18.18■□□□□ 0.5
CTSC-206ENST00000529974 MAGI2Q86UL8 1455 aa18.16■□□□□ 0.5
CTSC-206ENST00000529974 KDM5CP41229 1560 aa18.16■□□□□ 0.5
CTSC-206ENST00000529974 ABCC1P33527 1531 aa18.13■□□□□ 0.49
CTSC-206ENST00000529974 CEP162Q5TB80 1403 aa18.13■□□□□ 0.49
CTSC-206ENST00000529974 PTPRMP28827 1452 aa18.13■□□□□ 0.49
CTSC-206ENST00000529974 ITSN2Q9NZM3 1697 aa18.12■□□□□ 0.49
CTSC-206ENST00000529974 EFCAB2Q5VUJ9 269 aa18.12■□□□□ 0.49
CTSC-206ENST00000529974 ZNF518AQ6AHZ1 1483 aa18.12■□□□□ 0.49
CTSC-206ENST00000529974 RIMS1Q86UR5 1692 aaKnown RBP18.11■□□□□ 0.49
CTSC-206ENST00000529974 ARHGEF12Q9NZN5 1544 aa18.09■□□□□ 0.49
CTSC-206ENST00000529974 ABCA6Q8N139 1617 aa18.08■□□□□ 0.48
CTSC-206ENST00000529974 DIP2CQ9Y2E4 1556 aa18.08■□□□□ 0.48
CTSC-206ENST00000529974 SAMD9LQ8IVG5 1584 aa18.07■□□□□ 0.48
CTSC-206ENST00000529974 ARID4BQ4LE39 1312 aaPredicted RBP18.06■□□□□ 0.48
CTSC-206ENST00000529974 FER1L4A9Z1Z3 1794 aa18.06■□□□□ 0.48
CTSC-206ENST00000529974 C9orf84Q5VXU9 1444 aa18.06■□□□□ 0.48
CTSC-206ENST00000529974 ATP10AO60312 1499 aa18.05■□□□□ 0.48
CTSC-206ENST00000529974 REREQ9P2R6 1566 aa18.04■□□□□ 0.48
CTSC-206ENST00000529974 GPATCH8Q9UKJ3 1502 aaKnown RBP18.04■□□□□ 0.48
CTSC-206ENST00000529974 TRAPPC8Q9Y2L5 1435 aa18.04■□□□□ 0.48
CTSC-206ENST00000529974 EHBP1L1Q8N3D4 1523 aa18.03■□□□□ 0.48
CTSC-206ENST00000529974 MLH3Q9UHC1 1453 aa18.02■□□□□ 0.48
CTSC-206ENST00000529974 TIAM1Q13009 1591 aa18.02■□□□□ 0.48
CTSC-206ENST00000529974 SYCP2Q9BX26 1530 aa18.02■□□□□ 0.47
CTSC-206ENST00000529974 KIDINS220Q9ULH0 1771 aa18.02■□□□□ 0.47
CTSC-206ENST00000529974 AFAP1Q8N556 730 aa18.01■□□□□ 0.47
CTSC-206ENST00000529974 MTUS2Q5JR59 1369 aa17.98■□□□□ 0.47
CTSC-206ENST00000529974 LMTK3Q96Q04 1460 aa17.97■□□□□ 0.47
CTSC-206ENST00000529974 INO80Q9ULG1 1556 aaPredicted RBP17.96■□□□□ 0.46
CTSC-206ENST00000529974 AGLP35573 1532 aa17.94■□□□□ 0.46
CTSC-206ENST00000529974 CCNB3Q8WWL7 1395 aa17.93■□□□□ 0.46
CTSC-206ENST00000529974 VPS8Q8N3P4 1428 aa17.93■□□□□ 0.46
CTSC-206ENST00000529974 SUPT6HQ7KZ85 1726 aaKnown RBP17.92■□□□□ 0.46
CTSC-206ENST00000529974 KIAA1107Q9UPP5 1409 aa17.92■□□□□ 0.46
CTSC-206ENST00000529974 LOC105371045A0A1W2PR82 267 aa17.92■□□□□ 0.46
CTSC-206ENST00000529974 MLECQ14165 292 aa17.92■□□□□ 0.46
CTSC-206ENST00000529974 PLEKHH2Q8IVE3 1493 aa17.92■□□□□ 0.46
CTSC-206ENST00000529974 ATP7AQ04656 1500 aa17.91■□□□□ 0.46
CTSC-206ENST00000529974 PLXNC1O60486 1568 aa17.9■□□□□ 0.46
CTSC-206ENST00000529974 NCOA2Q15596 1464 aa17.89■□□□□ 0.45
CTSC-206ENST00000529974 ZNF777Q9ULD5 760 aaPredicted RBP17.89■□□□□ 0.45
CTSC-206ENST00000529974 PREX1Q8TCU6 1659 aa17.87■□□□□ 0.45
CTSC-206ENST00000529974 CFDP1Q9UEE9 299 aaPredicted RBP17.87■□□□□ 0.45
CTSC-206ENST00000529974 MBD5Q9P267 1494 aa17.86■□□□□ 0.45
CTSC-206ENST00000529974 C3P01024 1663 aa17.86■□□□□ 0.45
CTSC-206ENST00000529974 HNRNPMP52272 730 aaKnown RBP eCLIP17.85■□□□□ 0.45
CTSC-206ENST00000529974 MYT1LQ9UL68 1186 aa17.85■□□□□ 0.45
CTSC-206ENST00000529974 LRRC9Q6ZRR7 1453 aa17.84■□□□□ 0.45
CTSC-206ENST00000529974 ADGBQ8N7X0 1667 aa17.83■□□□□ 0.45
CTSC-206ENST00000529974 CAMSAP2Q08AD1 1489 aa17.83■□□□□ 0.45
CTSC-206ENST00000529974 SPAG9O60271 1321 aaKnown RBP17.83■□□□□ 0.44
CTSC-206ENST00000529974 ZNF644Q9H582 1327 aaPredicted RBP17.83■□□□□ 0.44
CTSC-206ENST00000529974 MAP3K1Q13233 1512 aa17.82■□□□□ 0.44
CTSC-206ENST00000529974 PLPPR3Q6T4P5 718 aa17.82■□□□□ 0.44
CTSC-206ENST00000529974 MROH2AA6NES4 1674 aa17.81■□□□□ 0.44
CTSC-206ENST00000529974 A2MP01023 1474 aa17.8■□□□□ 0.44
CTSC-206ENST00000529974 CCDC141Q6ZP82 1450 aa17.78■□□□□ 0.44
CTSC-206ENST00000529974 CEBPAP49715 358 aaPredicted RBP17.78■□□□□ 0.44
CTSC-206ENST00000529974 ARHGEF5Q12774 1597 aa17.78■□□□□ 0.44
CTSC-206ENST00000529974 HSPA2P54652 639 aa17.77■□□□□ 0.44
CTSC-206ENST00000529974 RTEL1-TNFRSF6BF6WH68 1400 aa17.76■□□□□ 0.43
CTSC-206ENST00000529974 CNTLNQ9NXG0 1405 aa17.76■□□□□ 0.43
CTSC-206ENST00000529974 CLTCQ00610 1675 aaKnown RBP17.76■□□□□ 0.43
CTSC-206ENST00000529974 SETD1BQ9UPS6 1966 aaKnown RBP17.73■□□□□ 0.43
CTSC-206ENST00000529974 UHRF1BP1Q6BDS2 1440 aa17.72■□□□□ 0.43
CTSC-206ENST00000529974 KANK4Q5T7N3 995 aaPredicted RBP17.72■□□□□ 0.43
CTSC-206ENST00000529974 STRCQ7RTU9 1775 aa17.71■□□□□ 0.43
CTSC-206ENST00000529974 ILDR1Q86SU0 546 aaPredicted RBP17.71■□□□□ 0.43
CTSC-206ENST00000529974 MAST1Q9Y2H9 1570 aa17.7■□□□□ 0.42
CTSC-206ENST00000529974 MYOM3Q5VTT5 1437 aa17.7■□□□□ 0.42
CTSC-206ENST00000529974 NPATQ14207 1427 aa17.68■□□□□ 0.42
CTSC-206ENST00000529974 MYO3AQ8NEV4 1616 aa17.68■□□□□ 0.42
CTSC-206ENST00000529974 ZNF142P52746 1687 aaPredicted RBP17.67■□□□□ 0.42
CTSC-206ENST00000529974 DHX29Q7Z478 1369 aaKnown RBP17.66■□□□□ 0.42
CTSC-206ENST00000529974 MIA2Q96PC5 1412 aa17.66■□□□□ 0.42
CTSC-206ENST00000529974 ESF1Q9H501 851 aaKnown RBP17.66■□□□□ 0.42
CTSC-206ENST00000529974 CROCC2H7BZ55 1655 aa17.66■□□□□ 0.42
CTSC-206ENST00000529974 ZMYM3Q14202 1370 aa17.65■□□□□ 0.42
CTSC-206ENST00000529974 FAM135AQ9P2D6 1515 aa17.64■□□□□ 0.41
CTSC-206ENST00000529974 RNF17Q9BXT8 1623 aaKnown RBP17.63■□□□□ 0.41
CTSC-206ENST00000529974 PTPRKQ15262 1439 aa17.63■□□□□ 0.41
CTSC-206ENST00000529974 KDM5DQ9BY66 1539 aa17.62■□□□□ 0.41
CTSC-206ENST00000529974 PTPN23Q9H3S7 1636 aa17.62■□□□□ 0.41
CTSC-206ENST00000529974 RSPH4AQ5TD94 716 aa17.62■□□□□ 0.41
CTSC-206ENST00000529974 GGT6Q6P531 493 aa17.61■□□□□ 0.41
CTSC-206ENST00000529974 EIF2AK4Q9P2K8 1649 aaKnown RBP17.61■□□□□ 0.41
CTSC-206ENST00000529974 CEP170BQ9Y4F5 1589 aaPredicted RBP17.6■□□□□ 0.41
CTSC-206ENST00000529974 MROH1Q8NDA8 1641 aa17.59■□□□□ 0.41
CTSC-206ENST00000529974 NCOA1Q15788 1441 aa17.59■□□□□ 0.41
CTSC-206ENST00000529974 DNMT1P26358 1616 aaKnown RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms