RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 C7P10643 843 aa8.73□□□□□ -1.01
SVIP-203ENST00000529848 IRX5P78411 483 aaPredicted RBP8.73□□□□□ -1.01
SVIP-203ENST00000529848 IER5LQ5T953 404 aa8.73□□□□□ -1.01
SVIP-203ENST00000529848 TULP1O00294 542 aaPredicted RBP8.72□□□□□ -1.01
SVIP-203ENST00000529848 DPY19L2Q6NUT2 758 aa8.72□□□□□ -1.01
SVIP-203ENST00000529848 OCEL1Q9H607 264 aa8.71□□□□□ -1.02
SVIP-203ENST00000529848 POTEJP0CG39 1038 aa8.7□□□□□ -1.02
SVIP-203ENST00000529848 PLCG2P16885 1265 aa8.7□□□□□ -1.02
SVIP-203ENST00000529848 MICALL2Q8IY33 904 aa8.7□□□□□ -1.02
SVIP-203ENST00000529848 PDCD7Q8N8D1 485 aaKnown RBP8.7□□□□□ -1.02
SVIP-203ENST00000529848 GPHNQ9NQX3 736 aaPredicted RBP8.69□□□□□ -1.02
SVIP-203ENST00000529848 PPP1R15BQ5SWA1 713 aa8.68□□□□□ -1.02
SVIP-203ENST00000529848 TMC2Q8TDI7 906 aa8.67□□□□□ -1.02
SVIP-203ENST00000529848 BOLA1Q9Y3E2 137 aa8.67□□□□□ -1.02
SVIP-203ENST00000529848 SEC24BO95487 1268 aa8.66□□□□□ -1.02
SVIP-203ENST00000529848 LMOD2Q6P5Q4 547 aa8.66□□□□□ -1.02
SVIP-203ENST00000529848 CAMK2BQ13554 666 aa8.65□□□□□ -1.02
SVIP-203ENST00000529848 L3MBTL3Q96JM7 780 aaPredicted RBP8.65□□□□□ -1.02
SVIP-203ENST00000529848 SEMA3EO15041 775 aa8.64□□□□□ -1.03
SVIP-203ENST00000529848 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.64□□□□□ -1.03
SVIP-203ENST00000529848 ARIH1Q9Y4X5 557 aaPredicted RBP8.64□□□□□ -1.03
SVIP-203ENST00000529848 LHX8Q68G74 356 aa8.63□□□□□ -1.03
SVIP-203ENST00000529848 TESPA1A2RU30 521 aaPredicted RBP8.62□□□□□ -1.03
SVIP-203ENST00000529848 SMYD5Q6GMV2 418 aa8.62□□□□□ -1.03
SVIP-203ENST00000529848 TMEM121BQ9BXQ6 578 aaPredicted RBP8.62□□□□□ -1.03
SVIP-203ENST00000529848 DSG2Q14126 1118 aa8.61□□□□□ -1.03
SVIP-203ENST00000529848 FOXK1P85037 733 aa8.6□□□□□ -1.03
SVIP-203ENST00000529848 C2orf72A6NCS6 295 aa8.59□□□□□ -1.03
SVIP-203ENST00000529848 PLPP6Q8IY26 295 aa8.58□□□□□ -1.04
SVIP-203ENST00000529848 OTUD5Q96G74 571 aa8.57□□□□□ -1.04
SVIP-203ENST00000529848 DPYSL4O14531 572 aa8.56□□□□□ -1.04
SVIP-203ENST00000529848 KIF3CO14782 793 aa8.56□□□□□ -1.04
SVIP-203ENST00000529848 EMILIN3Q9NT22 766 aa8.55□□□□□ -1.04
SVIP-203ENST00000529848 SPDYE16A6NNV3 312 aaPredicted RBP8.54□□□□□ -1.04
SVIP-203ENST00000529848 C3orf67Q6ZVT6 689 aa8.53□□□□□ -1.04
SVIP-203ENST00000529848 ZC3H15Q8WU90 426 aaKnown RBP8.52□□□□□ -1.05
SVIP-203ENST00000529848 MAP3K9P80192 1104 aa8.51□□□□□ -1.05
SVIP-203ENST00000529848 PDIA6Q15084 440 aa8.51□□□□□ -1.05
SVIP-203ENST00000529848 MLLT3P42568 568 aaPredicted RBP8.5□□□□□ -1.05
SVIP-203ENST00000529848 TMEM92Q6UXU6 159 aa8.5□□□□□ -1.05
SVIP-203ENST00000529848 UPF1Q92900 1129 aaKnown RBP eCLIP8.49□□□□□ -1.05
SVIP-203ENST00000529848 RBM26Q5T8P6 1007 aaKnown RBP8.46□□□□□ -1.06
SVIP-203ENST00000529848 GPIHBP1Q8IV16 184 aa8.46□□□□□ -1.06
SVIP-203ENST00000529848 TBC1D12O60347 775 aa8.45□□□□□ -1.06
SVIP-203ENST00000529848 SCUBE2Q9NQ36 999 aa8.45□□□□□ -1.06
SVIP-203ENST00000529848 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.45□□□□□ -1.06
SVIP-203ENST00000529848 OXER1Q8TDS5 423 aa8.44□□□□□ -1.06
SVIP-203ENST00000529848 ZNF316A6NFI3 1004 aaPredicted RBP8.43□□□□□ -1.06
SVIP-203ENST00000529848 MAMSTRQ6ZN01 415 aa8.43□□□□□ -1.06
SVIP-203ENST00000529848 GRXCR2A6NFK2 248 aa8.42□□□□□ -1.06
SVIP-203ENST00000529848 ZMYND10O75800 440 aa8.42□□□□□ -1.06
SVIP-203ENST00000529848 SLAIN1Q8ND83 568 aa8.42□□□□□ -1.06
SVIP-203ENST00000529848 SLC24A3Q9HC58 644 aa8.42□□□□□ -1.06
SVIP-203ENST00000529848 EVI5O60447 810 aa8.4□□□□□ -1.06
SVIP-203ENST00000529848 BARGINQ6ZT62 677 aa8.39□□□□□ -1.07
SVIP-203ENST00000529848 KRI1Q8N9T8 703 aaKnown RBP8.38□□□□□ -1.07
SVIP-203ENST00000529848 PTCD2Q8WV60 388 aaKnown RBP8.38□□□□□ -1.07
SVIP-203ENST00000529848 SLC34A2O95436 690 aa8.37□□□□□ -1.07
SVIP-203ENST00000529848 PTGER2P43116 358 aa8.37□□□□□ -1.07
SVIP-203ENST00000529848 DDX12PQ92771 950 aa8.37□□□□□ -1.07
SVIP-203ENST00000529848 NUTM2FA1L443 756 aa8.36□□□□□ -1.07
SVIP-203ENST00000529848 NEUROD2Q15784 382 aa8.35□□□□□ -1.07
SVIP-203ENST00000529848 OSBPP22059 807 aa8.34□□□□□ -1.07
SVIP-203ENST00000529848 BRPF1P55201 1214 aaPredicted RBP8.33□□□□□ -1.08
SVIP-203ENST00000529848 TMEM132AQ24JP5 1023 aa8.33□□□□□ -1.08
SVIP-203ENST00000529848 AK7Q96M32 723 aa8.33□□□□□ -1.08
SVIP-203ENST00000529848 HOXB3P14651 431 aaPredicted RBP8.31□□□□□ -1.08
SVIP-203ENST00000529848 LCE2DQ5TA82 110 aaPredicted RBP8.31□□□□□ -1.08
SVIP-203ENST00000529848 PCDHGA4Q9Y5G9 962 aa8.31□□□□□ -1.08
SVIP-203ENST00000529848 GPR37O15354 613 aa8.3□□□□□ -1.08
SVIP-203ENST00000529848 ANO8Q9HCE9 1232 aaPredicted RBP8.3□□□□□ -1.08
SVIP-203ENST00000529848 FCHSD2O94868 740 aa8.29□□□□□ -1.08
SVIP-203ENST00000529848 PHF14O94880 888 aa8.29□□□□□ -1.08
SVIP-203ENST00000529848 EPAS1Q99814 870 aa8.29□□□□□ -1.08
SVIP-203ENST00000529848 DOK7Q18PE1 504 aa8.28□□□□□ -1.08
SVIP-203ENST00000529848 RIMBP2O15034 1052 aa8.27□□□□□ -1.09
SVIP-203ENST00000529848 GNPATO15228 680 aa8.27□□□□□ -1.09
SVIP-203ENST00000529848 HIC1Q14526 733 aa8.27□□□□□ -1.09
SVIP-203ENST00000529848 MAP2K5Q13163 448 aa8.26□□□□□ -1.09
SVIP-203ENST00000529848 FAM163AQ96GL9 167 aaPredicted RBP8.26□□□□□ -1.09
SVIP-203ENST00000529848 MINK1Q8N4C8 1332 aaPredicted RBP8.26□□□□□ -1.09
SVIP-203ENST00000529848 MAP3K7O43318 606 aa8.25□□□□□ -1.09
SVIP-203ENST00000529848 PRIM1P49642 420 aaKnown RBP8.25□□□□□ -1.09
SVIP-203ENST00000529848 EN1Q05925 392 aaPredicted RBP8.25□□□□□ -1.09
SVIP-203ENST00000529848 TRIM66O15016 1216 aa8.24□□□□□ -1.09
SVIP-203ENST00000529848 ST18O60284 1047 aa8.24□□□□□ -1.09
SVIP-203ENST00000529848 TYW1BQ6NUM6 668 aa8.24□□□□□ -1.09
SVIP-203ENST00000529848 RBM33Q96EV2 1170 aaKnown RBP8.24□□□□□ -1.09
SVIP-203ENST00000529848 PTGDRQ13258 359 aa8.23□□□□□ -1.09
SVIP-203ENST00000529848 ZNF710Q8N1W2 664 aa8.23□□□□□ -1.09
SVIP-203ENST00000529848 FBXW7Q969H0 707 aa8.23□□□□□ -1.09
SVIP-203ENST00000529848 CCDC102AQ96A19 550 aa8.23□□□□□ -1.09
SVIP-203ENST00000529848 JPH4Q96JJ6 628 aa8.23□□□□□ -1.09
SVIP-203ENST00000529848 PCDHGA10Q9Y5H3 936 aa8.23□□□□□ -1.09
SVIP-203ENST00000529848 IRF6O14896 467 aa8.22□□□□□ -1.09
SVIP-203ENST00000529848 PDE4DQ08499 809 aa8.22□□□□□ -1.09
SVIP-203ENST00000529848 ZSWIM6Q9HCJ5 1215 aa8.22□□□□□ -1.09
SVIP-203ENST00000529848 GTF3C3Q9Y5Q9 886 aa8.22□□□□□ -1.09
SVIP-203ENST00000529848 NUDT7P0C024 238 aa8.21□□□□□ -1.1
SVIP-203ENST00000529848 ARSIQ5FYB1 569 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms