RNA–Protein interactions for RNA: ENST00000529539.5

CHID1-216, Transcript of chitinase domain containing 1, humanhuman

TSL 2

Gene CHID1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-216ENST00000529539 POGZQ7Z3K3 1410 aa34.4■■■■□ 3.1
CHID1-216ENST00000529539 ARHGAP5Q13017 1502 aa34.35■■■■□ 3.09
CHID1-216ENST00000529539 ADAMTSL3P82987 1691 aa34.35■■■■□ 3.09
CHID1-216ENST00000529539 ZFYVE16Q7Z3T8 1539 aa34.34■■■■□ 3.09
CHID1-216ENST00000529539 CEP162Q5TB80 1403 aa34.3■■■■□ 3.08
CHID1-216ENST00000529539 BCORL1Q5H9F3 1711 aa34.3■■■■□ 3.08
CHID1-216ENST00000529539 PREX2Q70Z35 1606 aa34.3■■■■□ 3.08
CHID1-216ENST00000529539 ZNF518AQ6AHZ1 1483 aa34.29■■■■□ 3.08
CHID1-216ENST00000529539 CDC42BPBQ9Y5S2 1711 aa34.29■■■■□ 3.08
CHID1-216ENST00000529539 ARID4BQ4LE39 1312 aaPredicted RBP34.28■■■■□ 3.08
CHID1-216ENST00000529539 YEATS2Q9ULM3 1422 aa34.27■■■■□ 3.08
CHID1-216ENST00000529539 KDM5CP41229 1560 aa34.23■■■■□ 3.07
CHID1-216ENST00000529539 PTPRMP28827 1452 aa34.2■■■■□ 3.07
CHID1-216ENST00000529539 CDC42BPAQ5VT25 1732 aa34.19■■■■□ 3.06
CHID1-216ENST00000529539 ATP10AO60312 1499 aa34.19■■■■□ 3.06
CHID1-216ENST00000529539 ABCC1P33527 1531 aa34.17■■■■□ 3.06
CHID1-216ENST00000529539 MADDQ8WXG6 1647 aa34.15■■■■□ 3.06
CHID1-216ENST00000529539 AFAP1Q8N556 730 aa34.15■■■■□ 3.06
CHID1-216ENST00000529539 C9orf84Q5VXU9 1444 aa34.14■■■■□ 3.06
CHID1-216ENST00000529539 MTUS2Q5JR59 1369 aa34.14■■■■□ 3.06
CHID1-216ENST00000529539 HECW2Q9P2P5 1572 aa34.14■■■■□ 3.06
CHID1-216ENST00000529539 GPATCH8Q9UKJ3 1502 aaKnown RBP34.13■■■■□ 3.05
CHID1-216ENST00000529539 MLH3Q9UHC1 1453 aa34.13■■■■□ 3.05
CHID1-216ENST00000529539 SIGLEC1Q9BZZ2 1709 aa34.1■■■■□ 3.05
CHID1-216ENST00000529539 ARHGEF12Q9NZN5 1544 aa34.09■■■■□ 3.05
CHID1-216ENST00000529539 ITSN2Q9NZM3 1697 aa34.09■■■■□ 3.05
CHID1-216ENST00000529539 EHBP1L1Q8N3D4 1523 aa34.07■■■■□ 3.04
CHID1-216ENST00000529539 TRAPPC8Q9Y2L5 1435 aa34.06■■■■□ 3.04
CHID1-216ENST00000529539 REREQ9P2R6 1566 aa34.06■■■■□ 3.04
CHID1-216ENST00000529539 CCNB3Q8WWL7 1395 aa34.05■■■■□ 3.04
CHID1-216ENST00000529539 LOC105371045A0A1W2PR82 267 aa34.04■■■■□ 3.04
CHID1-216ENST00000529539 KIAA1107Q9UPP5 1409 aa34.03■■■■□ 3.04
CHID1-216ENST00000529539 PLEKHH2Q8IVE3 1493 aa34.02■■■■□ 3.04
CHID1-216ENST00000529539 RIMS1Q86UR5 1692 aaKnown RBP34.02■■■■□ 3.04
CHID1-216ENST00000529539 SAMD9LQ8IVG5 1584 aa34.02■■■■□ 3.04
CHID1-216ENST00000529539 DIP2CQ9Y2E4 1556 aa34.02■■■■□ 3.04
CHID1-216ENST00000529539 CFDP1Q9UEE9 299 aaPredicted RBP34.01■■■■□ 3.03
CHID1-216ENST00000529539 MYT1LQ9UL68 1186 aa33.98■■■■□ 3.03
CHID1-216ENST00000529539 ZNF777Q9ULD5 760 aaPredicted RBP33.97■■■■□ 3.03
CHID1-216ENST00000529539 VPS8Q8N3P4 1428 aa33.96■■■■□ 3.03
CHID1-216ENST00000529539 ABCA6Q8N139 1617 aa33.96■■■■□ 3.03
CHID1-216ENST00000529539 SYCP2Q9BX26 1530 aa33.94■■■■□ 3.02
CHID1-216ENST00000529539 FER1L4A9Z1Z3 1794 aa33.94■■■■□ 3.02
CHID1-216ENST00000529539 MLECQ14165 292 aa33.93■■■■□ 3.02
CHID1-216ENST00000529539 AGLP35573 1532 aa33.93■■■■□ 3.02
CHID1-216ENST00000529539 TIAM1Q13009 1591 aa33.93■■■■□ 3.02
CHID1-216ENST00000529539 KIDINS220Q9ULH0 1771 aa33.93■■■■□ 3.02
CHID1-216ENST00000529539 HNRNPMP52272 730 aaKnown RBP eCLIP33.88■■■■□ 3.01
CHID1-216ENST00000529539 SPAG9O60271 1321 aaKnown RBP33.86■■■■□ 3.01
CHID1-216ENST00000529539 SUPT6HQ7KZ85 1726 aaKnown RBP33.86■■■■□ 3.01
CHID1-216ENST00000529539 MAP3K1Q13233 1512 aa33.84■■■■□ 3.01
CHID1-216ENST00000529539 NCOA2Q15596 1464 aa33.82■■■■□ 3.01
CHID1-216ENST00000529539 LMTK3Q96Q04 1460 aa33.82■■■■□ 3.01
CHID1-216ENST00000529539 ATP7AQ04656 1500 aa33.79■■■■□ 3
CHID1-216ENST00000529539 INO80Q9ULG1 1556 aaPredicted RBP33.79■■■■□ 3
CHID1-216ENST00000529539 LRRC9Q6ZRR7 1453 aa33.77■■■■□ 3
CHID1-216ENST00000529539 MBD5Q9P267 1494 aa33.77■■■■□ 3
CHID1-216ENST00000529539 ZNF644Q9H582 1327 aaPredicted RBP33.75■■■□□ 2.99
CHID1-216ENST00000529539 RSPH4AQ5TD94 716 aa33.72■■■□□ 2.99
CHID1-216ENST00000529539 RTEL1-TNFRSF6BF6WH68 1400 aa33.71■■■□□ 2.99
CHID1-216ENST00000529539 CNTLNQ9NXG0 1405 aa33.7■■■□□ 2.98
CHID1-216ENST00000529539 PLXNC1O60486 1568 aa33.69■■■□□ 2.98
CHID1-216ENST00000529539 PLPPR3Q6T4P5 718 aa33.68■■■□□ 2.98
CHID1-216ENST00000529539 ESF1Q9H501 851 aaKnown RBP33.68■■■□□ 2.98
CHID1-216ENST00000529539 A2MP01023 1474 aa33.68■■■□□ 2.98
CHID1-216ENST00000529539 CAMSAP2Q08AD1 1489 aa33.65■■■□□ 2.98
CHID1-216ENST00000529539 ADGBQ8N7X0 1667 aa33.64■■■□□ 2.98
CHID1-216ENST00000529539 SETD1BQ9UPS6 1966 aaKnown RBP33.64■■■□□ 2.98
CHID1-216ENST00000529539 CCDC141Q6ZP82 1450 aa33.63■■■□□ 2.97
CHID1-216ENST00000529539 CEBPAP49715 358 aaPredicted RBP33.63■■■□□ 2.97
CHID1-216ENST00000529539 PREX1Q8TCU6 1659 aa33.63■■■□□ 2.97
CHID1-216ENST00000529539 ARHGEF5Q12774 1597 aa33.6■■■□□ 2.97
CHID1-216ENST00000529539 C3P01024 1663 aa33.59■■■□□ 2.97
CHID1-216ENST00000529539 KANK4Q5T7N3 995 aaPredicted RBP33.59■■■□□ 2.97
CHID1-216ENST00000529539 PPP6R1Q9UPN7 881 aa33.58■■■□□ 2.97
CHID1-216ENST00000529539 MROH2AA6NES4 1674 aa33.57■■■□□ 2.96
CHID1-216ENST00000529539 MIA2Q96PC5 1412 aa33.56■■■□□ 2.96
CHID1-216ENST00000529539 HSPA2P54652 639 aa33.55■■■□□ 2.96
CHID1-216ENST00000529539 APLP2Q06481 763 aa33.54■■■□□ 2.96
CHID1-216ENST00000529539 DHX29Q7Z478 1369 aaKnown RBP33.54■■■□□ 2.96
CHID1-216ENST00000529539 UHRF1BP1Q6BDS2 1440 aa33.53■■■□□ 2.96
CHID1-216ENST00000529539 MYOM3Q5VTT5 1437 aa33.53■■■□□ 2.96
CHID1-216ENST00000529539 TSPY4P0CV99 314 aa33.49■■■□□ 2.95
CHID1-216ENST00000529539 TSPY10P0CW01 314 aa33.49■■■□□ 2.95
CHID1-216ENST00000529539 NPATQ14207 1427 aa33.49■■■□□ 2.95
CHID1-216ENST00000529539 ZMYM3Q14202 1370 aa33.47■■■□□ 2.95
CHID1-216ENST00000529539 GGT6Q6P531 493 aa33.44■■■□□ 2.94
CHID1-216ENST00000529539 MAST1Q9Y2H9 1570 aa33.43■■■□□ 2.94
CHID1-216ENST00000529539 FAM135AQ9P2D6 1515 aa33.41■■■□□ 2.94
CHID1-216ENST00000529539 CLTCQ00610 1675 aaKnown RBP33.41■■■□□ 2.94
CHID1-216ENST00000529539 ILDR1Q86SU0 546 aaPredicted RBP33.4■■■□□ 2.94
CHID1-216ENST00000529539 KIF3BO15066 747 aa33.35■■■□□ 2.93
CHID1-216ENST00000529539 DMRT2Q9Y5R5 561 aa33.34■■■□□ 2.93
CHID1-216ENST00000529539 PTPRKQ15262 1439 aa33.32■■■□□ 2.92
CHID1-216ENST00000529539 STRCQ7RTU9 1775 aa33.29■■■□□ 2.92
CHID1-216ENST00000529539 PTPN23Q9H3S7 1636 aa33.28■■■□□ 2.92
CHID1-216ENST00000529539 KDM5DQ9BY66 1539 aa33.28■■■□□ 2.92
CHID1-216ENST00000529539 SHANK2Q9UPX8 1470 aa33.26■■■□□ 2.92
CHID1-216ENST00000529539 FGD6Q6ZV73 1430 aa33.26■■■□□ 2.91
CHID1-216ENST00000529539 TCOF1Q13428 1488 aaKnown RBP33.25■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms