RNA–Protein interactions for RNA: ENST00000529373.1

UBTF-208, Transcript of upstream binding transcription factor, human

TSL 2

Gene UBTF, Length 674 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBTF-208	ENST00000529373	FYCO1	Q9BQS8	1478 aa		34.06	■■■■□ 3.04
UBTF-208	ENST00000529373	SCAPER	Q9BY12	1400 aa		34.04	■■■■□ 3.04
UBTF-208	ENST00000529373	ZFYVE16	Q7Z3T8	1539 aa		34.04	■■■■□ 3.04
UBTF-208	ENST00000529373	SIGLEC1	Q9BZZ2	1709 aa		34.04	■■■■□ 3.04
UBTF-208	ENST00000529373	YEATS2	Q9ULM3	1422 aa		34.04	■■■■□ 3.04
UBTF-208	ENST00000529373	MADD	Q8WXG6	1647 aa		34.02	■■■■□ 3.04
UBTF-208	ENST00000529373	PTPRM	P28827	1452 aa		34	■■■■□ 3.03
UBTF-208	ENST00000529373	MAGI2	Q86UL8	1455 aa		34	■■■■□ 3.03
UBTF-208	ENST00000529373	ARHGAP5	Q13017	1502 aa		33.99	■■■■□ 3.03
UBTF-208	ENST00000529373	CDC42BPB	Q9Y5S2	1711 aa		33.99	■■■■□ 3.03
UBTF-208	ENST00000529373	EFCAB2	Q5VUJ9	269 aa		33.98	■■■■□ 3.03
UBTF-208	ENST00000529373	PREX2	Q70Z35	1606 aa		33.97	■■■■□ 3.03
UBTF-208	ENST00000529373	ARID4B	Q4LE39	1312 aa	Predicted RBP	33.95	■■■■□ 3.03
UBTF-208	ENST00000529373	KDM5C	P41229	1560 aa		33.9	■■■■□ 3.02
UBTF-208	ENST00000529373	RIMS1	Q86UR5	1692 aa	Known RBP	33.9	■■■■□ 3.02
UBTF-208	ENST00000529373	CDC42BPA	Q5VT25	1732 aa		33.89	■■■■□ 3.02
UBTF-208	ENST00000529373	ZNF518A	Q6AHZ1	1483 aa		33.88	■■■■□ 3.01
UBTF-208	ENST00000529373	ABCC1	P33527	1531 aa		33.84	■■■■□ 3.01
UBTF-208	ENST00000529373	ATP10A	O60312	1499 aa		33.82	■■■■□ 3
UBTF-208	ENST00000529373	ITSN2	Q9NZM3	1697 aa		33.81	■■■■□ 3
UBTF-208	ENST00000529373	ARHGEF12	Q9NZN5	1544 aa		33.8	■■■■□ 3
UBTF-208	ENST00000529373	C9orf84	Q5VXU9	1444 aa		33.79	■■■■□ 3
UBTF-208	ENST00000529373	AFAP1	Q8N556	730 aa		33.78	■■■■□ 3
UBTF-208	ENST00000529373	CEP162	Q5TB80	1403 aa		33.78	■■■■□ 3
UBTF-208	ENST00000529373	FER1L4	A9Z1Z3	1794 aa		33.76	■■■■□ 3
UBTF-208	ENST00000529373	DIP2C	Q9Y2E4	1556 aa		33.76	■■■□□ 2.99
UBTF-208	ENST00000529373	TRAPPC8	Q9Y2L5	1435 aa		33.74	■■■□□ 2.99
UBTF-208	ENST00000529373	ABCA6	Q8N139	1617 aa		33.74	■■■□□ 2.99
UBTF-208	ENST00000529373	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33.72	■■■□□ 2.99
UBTF-208	ENST00000529373	SAMD9L	Q8IVG5	1584 aa		33.72	■■■□□ 2.99
UBTF-208	ENST00000529373	MLH3	Q9UHC1	1453 aa		33.7	■■■□□ 2.99
UBTF-208	ENST00000529373	RERE	Q9P2R6	1566 aa		33.68	■■■□□ 2.98
UBTF-208	ENST00000529373	MLEC	Q14165	292 aa		33.68	■■■□□ 2.98
UBTF-208	ENST00000529373	LMTK3	Q96Q04	1460 aa		33.68	■■■□□ 2.98
UBTF-208	ENST00000529373	KIDINS220	Q9ULH0	1771 aa		33.65	■■■□□ 2.98
UBTF-208	ENST00000529373	SYCP2	Q9BX26	1530 aa		33.63	■■■□□ 2.97
UBTF-208	ENST00000529373	MTUS2	Q5JR59	1369 aa		33.61	■■■□□ 2.97
UBTF-208	ENST00000529373	EHBP1L1	Q8N3D4	1523 aa		33.61	■■■□□ 2.97
UBTF-208	ENST00000529373	TIAM1	Q13009	1591 aa		33.58	■■■□□ 2.97
UBTF-208	ENST00000529373	MYT1L	Q9UL68	1186 aa		33.56	■■■□□ 2.96
UBTF-208	ENST00000529373	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.56	■■■□□ 2.96
UBTF-208	ENST00000529373	CCNB3	Q8WWL7	1395 aa		33.56	■■■□□ 2.96
UBTF-208	ENST00000529373	AGL	P35573	1532 aa		33.54	■■■□□ 2.96
UBTF-208	ENST00000529373	PLPPR3	Q6T4P5	718 aa		33.54	■■■□□ 2.96
UBTF-208	ENST00000529373	KIAA1107	Q9UPP5	1409 aa		33.51	■■■□□ 2.95
UBTF-208	ENST00000529373	CFDP1	Q9UEE9	299 aa	Predicted RBP	33.5	■■■□□ 2.95
UBTF-208	ENST00000529373	PLEKHH2	Q8IVE3	1493 aa		33.5	■■■□□ 2.95
UBTF-208	ENST00000529373	LOC105371045	A0A1W2PR82	267 aa		33.49	■■■□□ 2.95
UBTF-208	ENST00000529373	INO80	Q9ULG1	1556 aa	Predicted RBP	33.49	■■■□□ 2.95
UBTF-208	ENST00000529373	HNRNPM	P52272	730 aa	Known RBP eCLIP	33.47	■■■□□ 2.95
UBTF-208	ENST00000529373	ATP7A	Q04656	1500 aa		33.46	■■■□□ 2.95
UBTF-208	ENST00000529373	PREX1	Q8TCU6	1659 aa		33.43	■■■□□ 2.94
UBTF-208	ENST00000529373	ILDR1	Q86SU0	546 aa	Predicted RBP	33.43	■■■□□ 2.94
UBTF-208	ENST00000529373	SPAG9	O60271	1321 aa	Known RBP	33.42	■■■□□ 2.94
UBTF-208	ENST00000529373	VPS8	Q8N3P4	1428 aa		33.41	■■■□□ 2.94
UBTF-208	ENST00000529373	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.41	■■■□□ 2.94
UBTF-208	ENST00000529373	C3	P01024	1663 aa		33.4	■■■□□ 2.94
UBTF-208	ENST00000529373	CEBPA	P49715	358 aa	Predicted RBP	33.4	■■■□□ 2.94
UBTF-208	ENST00000529373	HSPA2	P54652	639 aa		33.4	■■■□□ 2.94
UBTF-208	ENST00000529373	PLXNC1	O60486	1568 aa		33.39	■■■□□ 2.94
UBTF-208	ENST00000529373	ZNF644	Q9H582	1327 aa	Predicted RBP	33.39	■■■□□ 2.94
UBTF-208	ENST00000529373	NCOA2	Q15596	1464 aa		33.38	■■■□□ 2.93
UBTF-208	ENST00000529373	MBD5	Q9P267	1494 aa		33.37	■■■□□ 2.93
UBTF-208	ENST00000529373	A2M	P01023	1474 aa		33.3	■■■□□ 2.92
UBTF-208	ENST00000529373	ADGB	Q8N7X0	1667 aa		33.29	■■■□□ 2.92
UBTF-208	ENST00000529373	SETD1B	Q9UPS6	1966 aa	Known RBP	33.29	■■■□□ 2.92
UBTF-208	ENST00000529373	CAMSAP2	Q08AD1	1489 aa		33.27	■■■□□ 2.92
UBTF-208	ENST00000529373	LRRC9	Q6ZRR7	1453 aa		33.27	■■■□□ 2.92
UBTF-208	ENST00000529373	CNTLN	Q9NXG0	1405 aa		33.27	■■■□□ 2.92
UBTF-208	ENST00000529373	MROH2A	A6NES4	1674 aa		33.26	■■■□□ 2.92
UBTF-208	ENST00000529373	UHRF1BP1	Q6BDS2	1440 aa		33.22	■■■□□ 2.91
UBTF-208	ENST00000529373	MAP3K1	Q13233	1512 aa		33.22	■■■□□ 2.91
UBTF-208	ENST00000529373	RTEL1-TNFRSF6B	F6WH68	1400 aa		33.2	■■■□□ 2.91
UBTF-208	ENST00000529373	CCDC141	Q6ZP82	1450 aa		33.2	■■■□□ 2.91
UBTF-208	ENST00000529373	ESF1	Q9H501	851 aa	Known RBP	33.2	■■■□□ 2.91
UBTF-208	ENST00000529373	CLTC	Q00610	1675 aa	Known RBP	33.2	■■■□□ 2.9
UBTF-208	ENST00000529373	STRC	Q7RTU9	1775 aa		33.17	■■■□□ 2.9
UBTF-208	ENST00000529373	ARHGEF5	Q12774	1597 aa		33.16	■■■□□ 2.9
UBTF-208	ENST00000529373	KANK4	Q5T7N3	995 aa	Predicted RBP	33.13	■■■□□ 2.89
UBTF-208	ENST00000529373	NPAT	Q14207	1427 aa		33.11	■■■□□ 2.89
UBTF-208	ENST00000529373	ZMYM3	Q14202	1370 aa		33.1	■■■□□ 2.89
UBTF-208	ENST00000529373	DHX29	Q7Z478	1369 aa	Known RBP	33.08	■■■□□ 2.89
UBTF-208	ENST00000529373	GGT6	Q6P531	493 aa		33.05	■■■□□ 2.88
UBTF-208	ENST00000529373	FBXO41	Q8TF61	875 aa		33.04	■■■□□ 2.88
UBTF-208	ENST00000529373	RSPH4A	Q5TD94	716 aa		33.03	■■■□□ 2.88
UBTF-208	ENST00000529373	MYOM3	Q5VTT5	1437 aa		33.02	■■■□□ 2.88
UBTF-208	ENST00000529373	MYO3A	Q8NEV4	1616 aa		33.01	■■■□□ 2.87
UBTF-208	ENST00000529373	PTPRK	Q15262	1439 aa		33.01	■■■□□ 2.87
UBTF-208	ENST00000529373	MAST1	Q9Y2H9	1570 aa		33	■■■□□ 2.87
UBTF-208	ENST00000529373	ZNF142	P52746	1687 aa	Predicted RBP	32.99	■■■□□ 2.87
UBTF-208	ENST00000529373	MIA2	Q96PC5	1412 aa		32.99	■■■□□ 2.87
UBTF-208	ENST00000529373	PPP6R1	Q9UPN7	881 aa		32.97	■■■□□ 2.87
UBTF-208	ENST00000529373	NCOA1	Q15788	1441 aa		32.95	■■■□□ 2.87
UBTF-208	ENST00000529373	FAM135A	Q9P2D6	1515 aa		32.93	■■■□□ 2.86
UBTF-208	ENST00000529373	KDM5D	Q9BY66	1539 aa		32.92	■■■□□ 2.86
UBTF-208	ENST00000529373	CAMSAP1	Q5T5Y3	1602 aa		32.92	■■■□□ 2.86
UBTF-208	ENST00000529373	KIF3B	O15066	747 aa		32.92	■■■□□ 2.86
UBTF-208	ENST00000529373	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.92	■■■□□ 2.86
UBTF-208	ENST00000529373	TSPY4	P0CV99	314 aa		32.9	■■■□□ 2.86
UBTF-208	ENST00000529373	TSPY10	P0CW01	314 aa		32.9	■■■□□ 2.86

Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms