RNA–Protein interactions for RNA: ENST00000529172.1

PPP6R3-216, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

TSL 2

Gene PPP6R3, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-216ENST00000529172 CIZ1Q9ULV3 898 aaPredicted RBP9.58□□□□□ -0.88
PPP6R3-216ENST00000529172 TRIM41Q8WV44 630 aa9.53□□□□□ -0.88
PPP6R3-216ENST00000529172 PLCB2Q00722 1185 aa9.52□□□□□ -0.89
PPP6R3-216ENST00000529172 PKD2Q13563 968 aa9.52□□□□□ -0.89
PPP6R3-216ENST00000529172 SOX12O15370 315 aa9.5□□□□□ -0.89
PPP6R3-216ENST00000529172 MS4A4AQ96JQ5 239 aa9.49□□□□□ -0.89
PPP6R3-216ENST00000529172 ARSIQ5FYB1 569 aa9.45□□□□□ -0.9
PPP6R3-216ENST00000529172 ZNF316A6NFI3 1004 aaPredicted RBP9.44□□□□□ -0.9
PPP6R3-216ENST00000529172 ECM2O94769 699 aaPredicted RBP9.44□□□□□ -0.9
PPP6R3-216ENST00000529172 HAP1P54257 671 aaPredicted RBP9.43□□□□□ -0.9
PPP6R3-216ENST00000529172 ANKRD13DQ6ZTN6 518 aa9.43□□□□□ -0.9
PPP6R3-216ENST00000529172 LSM11P83369 360 aaKnown RBP eCLIP9.42□□□□□ -0.9
PPP6R3-216ENST00000529172 PHF8Q9UPP1 1060 aa9.41□□□□□ -0.9
PPP6R3-216ENST00000529172 RIOK3O14730 519 aaKnown RBP9.39□□□□□ -0.91
PPP6R3-216ENST00000529172 KHSRPQ92945 711 aaKnown RBP eCLIP9.39□□□□□ -0.913e-6■□□□□ 9.8
PPP6R3-216ENST00000529172 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.38□□□□□ -0.91
PPP6R3-216ENST00000529172 RNF25Q96BH1 459 aaPredicted RBP9.38□□□□□ -0.91
PPP6R3-216ENST00000529172 ZFP91Q96JP5 570 aaPredicted RBP9.38□□□□□ -0.91
PPP6R3-216ENST00000529172 PBX2P40425 430 aa9.37□□□□□ -0.91
PPP6R3-216ENST00000529172 VGFO15240 615 aaPredicted RBP9.36□□□□□ -0.91
PPP6R3-216ENST00000529172 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.36□□□□□ -0.91
PPP6R3-216ENST00000529172 KIF3CO14782 793 aa9.34□□□□□ -0.91
PPP6R3-216ENST00000529172 POTEEQ6S8J3 1075 aa9.34□□□□□ -0.91
PPP6R3-216ENST00000529172 FBXO22Q8NEZ5 403 aa9.34□□□□□ -0.91
PPP6R3-216ENST00000529172 BBXQ8WY36 941 aaPredicted RBP9.33□□□□□ -0.92
PPP6R3-216ENST00000529172 NLRP6P59044 892 aa9.32□□□□□ -0.92
PPP6R3-216ENST00000529172 PLA2G2EQ9NZK7 142 aa9.31□□□□□ -0.92
PPP6R3-216ENST00000529172 RGL2O15211 777 aa9.3□□□□□ -0.92
PPP6R3-216ENST00000529172 SLC34A2O95436 690 aa9.3□□□□□ -0.92
PPP6R3-216ENST00000529172 HCSTQ9UBK5 93 aa9.3□□□□□ -0.92
PPP6R3-216ENST00000529172 NUDT7P0C024 238 aa9.28□□□□□ -0.92
PPP6R3-216ENST00000529172 C2orf72A6NCS6 295 aa9.27□□□□□ -0.93
PPP6R3-216ENST00000529172 VSIG10Q8N0Z9 540 aa9.27□□□□□ -0.93
PPP6R3-216ENST00000529172 LHX6Q9UPM6 363 aa9.27□□□□□ -0.93
PPP6R3-216ENST00000529172 PAXIP1Q6ZW49 1069 aaPredicted RBP9.26□□□□□ -0.93
PPP6R3-216ENST00000529172 PCDHGA4Q9Y5G9 962 aa9.26□□□□□ -0.93
PPP6R3-216ENST00000529172 CFAP44Q96MT7 982 aa9.25□□□□□ -0.93
PPP6R3-216ENST00000529172 AXIN2Q9Y2T1 843 aa9.25□□□□□ -0.93
PPP6R3-216ENST00000529172 MFRPQ9BY79 579 aa9.24□□□□□ -0.93
PPP6R3-216ENST00000529172 ADGRD1Q6QNK2 874 aa9.23□□□□□ -0.93
PPP6R3-216ENST00000529172 ARHGAP33O14559 1287 aa9.21□□□□□ -0.94
PPP6R3-216ENST00000529172 BCL11BQ9C0K0 894 aaPredicted RBP9.21□□□□□ -0.94
PPP6R3-216ENST00000529172 KDM4FA0A1W2PPD8 638 aa9.2□□□□□ -0.94
PPP6R3-216ENST00000529172 TK2O00142 265 aa9.2□□□□□ -0.94
PPP6R3-216ENST00000529172 CHGAP10645 457 aaKnown RBP9.2□□□□□ -0.94
PPP6R3-216ENST00000529172 BCANQ96GW7 911 aa9.2□□□□□ -0.94
PPP6R3-216ENST00000529172 PSDA5PKW4 1024 aaPredicted RBP9.19□□□□□ -0.94
PPP6R3-216ENST00000529172 HRO43593 1189 aa9.19□□□□□ -0.94
PPP6R3-216ENST00000529172 SPRYD3Q8NCJ5 442 aa9.19□□□□□ -0.94
PPP6R3-216ENST00000529172 TAOK2Q9UL54 1235 aa9.19□□□□□ -0.94
PPP6R3-216ENST00000529172 STK24Q9Y6E0 443 aa9.16□□□□□ -0.94
PPP6R3-216ENST00000529172 TMC2Q8TDI7 906 aa9.14□□□□□ -0.95
PPP6R3-216ENST00000529172 DMRTA1Q5VZB9 504 aa9.12□□□□□ -0.95
PPP6R3-216ENST00000529172 PTCD2Q8WV60 388 aaKnown RBP9.12□□□□□ -0.95
PPP6R3-216ENST00000529172 KDM2AQ9Y2K7 1162 aa9.11□□□□□ -0.95
PPP6R3-216ENST00000529172 HS6ST3Q8IZP7 471 aa9.1□□□□□ -0.95
PPP6R3-216ENST00000529172 STK25O00506 426 aa9.09□□□□□ -0.95
PPP6R3-216ENST00000529172 PSEN2P49810 448 aa9.09□□□□□ -0.95
PPP6R3-216ENST00000529172 RGS20O76081 388 aa9.08□□□□□ -0.96
PPP6R3-216ENST00000529172 IFFO2Q5TF58 517 aa9.08□□□□□ -0.96
PPP6R3-216ENST00000529172 TSHZ2Q9NRE2 1034 aa9.08□□□□□ -0.96
PPP6R3-216ENST00000529172 KCTD12Q96CX2 325 aaKnown RBP9.06□□□□□ -0.96
PPP6R3-216ENST00000529172 PPP4R3BQ5MIZ7 849 aa9.04□□□□□ -0.96
PPP6R3-216ENST00000529172 PPP1R37O75864 691 aa9.03□□□□□ -0.96
PPP6R3-216ENST00000529172 FOXK1P85037 733 aa9.03□□□□□ -0.96
PPP6R3-216ENST00000529172 DNAJC5Q9H3Z4 198 aa9□□□□□ -0.97
PPP6R3-216ENST00000529172 STAC3Q96MF2 364 aa8.99□□□□□ -0.97
PPP6R3-216ENST00000529172 VPS9D1Q9Y2B5 631 aa8.99□□□□□ -0.97
PPP6R3-216ENST00000529172 PLPP6Q8IY26 295 aa8.98□□□□□ -0.97
PPP6R3-216ENST00000529172 SLC4A5Q9BY07 1137 aa8.98□□□□□ -0.97
PPP6R3-216ENST00000529172 GPHNQ9NQX3 736 aaPredicted RBP8.98□□□□□ -0.97
PPP6R3-216ENST00000529172 KCNK17Q96T54 332 aa8.97□□□□□ -0.97
PPP6R3-216ENST00000529172 TBC1D12O60347 775 aa8.96□□□□□ -0.98
PPP6R3-216ENST00000529172 PRKCSHP14314 528 aaPredicted RBP8.96□□□□□ -0.98
PPP6R3-216ENST00000529172 A0A0G2JS52 829 aa8.95□□□□□ -0.98
PPP6R3-216ENST00000529172 BHMG1C9JSJ3 638 aaPredicted RBP8.95□□□□□ -0.98
PPP6R3-216ENST00000529172 KCNH8Q96L42 1107 aa8.95□□□□□ -0.98
PPP6R3-216ENST00000529172 IRX2Q9BZI1 471 aaPredicted RBP8.95□□□□□ -0.98
PPP6R3-216ENST00000529172 PTPN5P54829 565 aa8.94□□□□□ -0.98
PPP6R3-216ENST00000529172 DSG2Q14126 1118 aa8.94□□□□□ -0.98
PPP6R3-216ENST00000529172 NKX1-1Q15270 411 aaPredicted RBP8.94□□□□□ -0.98
PPP6R3-216ENST00000529172 THSD4Q6ZMP0 1018 aa8.93□□□□□ -0.98
PPP6R3-216ENST00000529172 BCL2L12Q9HB09 334 aa8.93□□□□□ -0.98
PPP6R3-216ENST00000529172 GTPBP6O43824 516 aaPredicted RBP8.91□□□□□ -0.98
PPP6R3-216ENST00000529172 NBR1Q14596 966 aa8.9□□□□□ -0.98
PPP6R3-216ENST00000529172 TPRNQ4KMQ1 711 aa8.9□□□□□ -0.98
PPP6R3-216ENST00000529172 OXER1Q8TDS5 423 aa8.9□□□□□ -0.98
PPP6R3-216ENST00000529172 RYDENQ9NUL5 291 aaKnown RBP8.9□□□□□ -0.98
PPP6R3-216ENST00000529172 ZBED2Q9BTP6 218 aa8.87□□□□□ -0.99
PPP6R3-216ENST00000529172 FOSBP53539 338 aa8.86□□□□□ -0.99
PPP6R3-216ENST00000529172 ZNF454Q8N9F8 522 aa8.86□□□□□ -0.99
PPP6R3-216ENST00000529172 WNT2BQ93097 391 aa8.85□□□□□ -0.99
PPP6R3-216ENST00000529172 PTPREP23469 700 aa8.84□□□□□ -0.99
PPP6R3-216ENST00000529172 ITGBL1O95965 494 aaPredicted RBP8.82□□□□□ -1
PPP6R3-216ENST00000529172 MRPL50Q8N5N7 158 aaKnown RBP8.82□□□□□ -1
PPP6R3-216ENST00000529172 ANO8Q9HCE9 1232 aaPredicted RBP8.82□□□□□ -1
PPP6R3-216ENST00000529172 GOLGA8CPA6NN73 597 aa8.81□□□□□ -1
PPP6R3-216ENST00000529172 UPF1Q92900 1129 aaKnown RBP eCLIP8.79□□□□□ -1
PPP6R3-216ENST00000529172 JPH4Q96JJ6 628 aa8.79□□□□□ -1
PPP6R3-216ENST00000529172 NBPF3Q9H094 633 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms