RNA–Protein interactions for RNA: ENST00000529054.5

MS4A6A-210, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 5 BASIC

Gene MS4A6A, Length 1,160 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-210ENST00000529054 C2orf72A6NCS6 295 aa15.21■□□□□ 0.03
MS4A6A-210ENST00000529054 DOK7Q18PE1 504 aa15.21■□□□□ 0.03
MS4A6A-210ENST00000529054 KIF3CO14782 793 aa15.2■□□□□ 0.02
MS4A6A-210ENST00000529054 ZNF710Q8N1W2 664 aa15.19■□□□□ 0.02
MS4A6A-210ENST00000529054 EMP3P54852 163 aa15.16■□□□□ 0.02
MS4A6A-210ENST00000529054 GTPBP6O43824 516 aaPredicted RBP15.14■□□□□ 0.01
MS4A6A-210ENST00000529054 CDAN1Q8IWY9 1227 aa15.14■□□□□ 0.01
MS4A6A-210ENST00000529054 PCDH10Q9P2E7 1040 aa15.14■□□□□ 0.01
MS4A6A-210ENST00000529054 HOXB1P14653 301 aaPredicted RBP15.12■□□□□ 0.01
MS4A6A-210ENST00000529054 TMC2Q8TDI7 906 aa15.12■□□□□ 0.01
MS4A6A-210ENST00000529054 POTEB3A0JP26 581 aa15.11■□□□□ 0.01
MS4A6A-210ENST00000529054 POTEBQ6S5H4 581 aa15.11■□□□□ 0.01
MS4A6A-210ENST00000529054 RYDENQ9NUL5 291 aaKnown RBP15.11■□□□□ 0.01
MS4A6A-210ENST00000529054 RIMBP2O15034 1052 aa15.1■□□□□ 0.01
MS4A6A-210ENST00000529054 FAM205CA6NFA0 338 aa15.09■□□□□ 0.01
MS4A6A-210ENST00000529054 GPR153Q6NV75 609 aa15.06■□□□□ 0
MS4A6A-210ENST00000529054 HS3ST6Q96QI5 342 aa15.06■□□□□ 0
MS4A6A-210ENST00000529054 ZSWIM6Q9HCJ5 1215 aa15.06■□□□□ 0
MS4A6A-210ENST00000529054 PLSCR2Q9NRY7 297 aa15.06■□□□□ 0
MS4A6A-210ENST00000529054 ARSIQ5FYB1 569 aa15.04■□□□□ -0
MS4A6A-210ENST00000529054 KHSRPQ92945 711 aaKnown RBP eCLIP15.04■□□□□ -0
MS4A6A-210ENST00000529054 GPHNQ9NQX3 736 aaPredicted RBP15.01□□□□□ -0.01
MS4A6A-210ENST00000529054 ERBB3P21860 1342 aa14.98□□□□□ -0.01
MS4A6A-210ENST00000529054 DSG2Q14126 1118 aa14.98□□□□□ -0.01
MS4A6A-210ENST00000529054 FOXK1P85037 733 aa14.97□□□□□ -0.01
MS4A6A-210ENST00000529054 PLPP6Q8IY26 295 aa14.96□□□□□ -0.01
MS4A6A-210ENST00000529054 BBXQ8WY36 941 aaPredicted RBP14.96□□□□□ -0.01
MS4A6A-210ENST00000529054 SLC34A2O95436 690 aa14.94□□□□□ -0.02
MS4A6A-210ENST00000529054 CRISPLD2Q9H0B8 497 aa14.94□□□□□ -0.02
MS4A6A-210ENST00000529054 NCKAP5LQ9HCH0 1330 aa14.93□□□□□ -0.02
MS4A6A-210ENST00000529054 VARS2Q5ST30 1063 aaKnown RBP14.93□□□□□ -0.02
MS4A6A-210ENST00000529054 PCDHGA4Q9Y5G9 962 aa14.93□□□□□ -0.02
MS4A6A-210ENST00000529054 NUDT7P0C024 238 aa14.9□□□□□ -0.02
MS4A6A-210ENST00000529054 KRTAP3-3Q9BYR6 98 aa14.89□□□□□ -0.03
MS4A6A-210ENST00000529054 KRTAP3-2Q9BYR7 98 aa14.89□□□□□ -0.03
MS4A6A-210ENST00000529054 CADPS2Q86UW7 1296 aa14.87□□□□□ -0.03
MS4A6A-210ENST00000529054 ZNF316A6NFI3 1004 aaPredicted RBP14.85□□□□□ -0.03
MS4A6A-210ENST00000529054 PDE4AP27815 886 aa14.84□□□□□ -0.03
MS4A6A-210ENST00000529054 PPP1R15BQ5SWA1 713 aa14.84□□□□□ -0.03
MS4A6A-210ENST00000529054 PTCD2Q8WV60 388 aaKnown RBP14.84□□□□□ -0.03
MS4A6A-210ENST00000529054 LARP6Q9BRS8 491 aaKnown RBP14.83□□□□□ -0.04
MS4A6A-210ENST00000529054 LHX6Q9UPM6 363 aa14.8□□□□□ -0.04
MS4A6A-210ENST00000529054 ZNF687Q8N1G0 1237 aa14.79□□□□□ -0.04
MS4A6A-210ENST00000529054 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.79□□□□□ -0.04
MS4A6A-210ENST00000529054 KDM4FA0A1W2PPD8 638 aa14.78□□□□□ -0.04
MS4A6A-210ENST00000529054 SPRYD3Q8NCJ5 442 aa14.78□□□□□ -0.04
MS4A6A-210ENST00000529054 UPF1Q92900 1129 aaKnown RBP eCLIP14.78□□□□□ -0.04
MS4A6A-210ENST00000529054 SPNS2Q8IVW8 549 aa14.77□□□□□ -0.05
MS4A6A-210ENST00000529054 DDX27Q96GQ7 796 aaKnown RBP14.76□□□□□ -0.05
MS4A6A-210ENST00000529054 MFSD10Q14728 455 aa14.75□□□□□ -0.05
MS4A6A-210ENST00000529054 OXER1Q8TDS5 423 aa14.75□□□□□ -0.05
MS4A6A-210ENST00000529054 PAXIP1Q6ZW49 1069 aaPredicted RBP14.74□□□□□ -0.05
MS4A6A-210ENST00000529054 CFAP44Q96MT7 982 aa14.74□□□□□ -0.05
MS4A6A-210ENST00000529054 TBC1D12O60347 775 aa14.72□□□□□ -0.05
MS4A6A-210ENST00000529054 MMRN1Q13201 1228 aa14.66□□□□□ -0.06
MS4A6A-210ENST00000529054 POTEEQ6S8J3 1075 aa14.65□□□□□ -0.06
MS4A6A-210ENST00000529054 EMILIN3Q9NT22 766 aa14.64□□□□□ -0.07
MS4A6A-210ENST00000529054 AXIN2Q9Y2T1 843 aa14.62□□□□□ -0.07
MS4A6A-210ENST00000529054 PSDA5PKW4 1024 aaPredicted RBP14.59□□□□□ -0.07
MS4A6A-210ENST00000529054 ANKRD13DQ6ZTN6 518 aa14.58□□□□□ -0.08
MS4A6A-210ENST00000529054 EVI5O60447 810 aa14.57□□□□□ -0.08
MS4A6A-210ENST00000529054 PBX2P40425 430 aa14.56□□□□□ -0.08
MS4A6A-210ENST00000529054 MAP3K9P80192 1104 aa14.56□□□□□ -0.08
MS4A6A-210ENST00000529054 LSM11P83369 360 aaKnown RBP eCLIP14.56□□□□□ -0.08
MS4A6A-210ENST00000529054 PPP4R3BQ5MIZ7 849 aa14.55□□□□□ -0.08
MS4A6A-210ENST00000529054 CAMK2BQ13554 666 aa14.54□□□□□ -0.08
MS4A6A-210ENST00000529054 ANO8Q9HCE9 1232 aaPredicted RBP14.54□□□□□ -0.08
MS4A6A-210ENST00000529054 ZNF454Q8N9F8 522 aa14.52□□□□□ -0.09
MS4A6A-210ENST00000529054 PSEN2P49810 448 aa14.51□□□□□ -0.09
MS4A6A-210ENST00000529054 ARHGAP33O14559 1287 aa14.5□□□□□ -0.09
MS4A6A-210ENST00000529054 FOSBP53539 338 aa14.49□□□□□ -0.09
MS4A6A-210ENST00000529054 DPYSL4O14531 572 aa14.48□□□□□ -0.09
MS4A6A-210ENST00000529054 DMRTA1Q5VZB9 504 aa14.48□□□□□ -0.09
MS4A6A-210ENST00000529054 TSHZ2Q9NRE2 1034 aa14.45□□□□□ -0.1
MS4A6A-210ENST00000529054 JPH4Q96JJ6 628 aa14.44□□□□□ -0.1
MS4A6A-210ENST00000529054 KCNK17Q96T54 332 aa14.44□□□□□ -0.1
MS4A6A-210ENST00000529054 MYT1LQ9UL68 1186 aa14.43□□□□□ -0.1
MS4A6A-210ENST00000529054 BCL2L12Q9HB09 334 aa14.41□□□□□ -0.1
MS4A6A-210ENST00000529054 ADGRD1Q6QNK2 874 aa14.4□□□□□ -0.1
MS4A6A-210ENST00000529054 RNF166Q96A37 237 aaPredicted RBP14.4□□□□□ -0.1
MS4A6A-210ENST00000529054 PLCB2Q00722 1185 aa14.39□□□□□ -0.11
MS4A6A-210ENST00000529054 ADAM33Q9BZ11 813 aa14.39□□□□□ -0.11
MS4A6A-210ENST00000529054 WDR70Q9NW82 654 aa14.39□□□□□ -0.11
MS4A6A-210ENST00000529054 E2F4Q16254 413 aa14.38□□□□□ -0.11
MS4A6A-210ENST00000529054 ZDHHC16Q969W1 377 aa14.38□□□□□ -0.11
MS4A6A-210ENST00000529054 PCDHGA10Q9Y5H3 936 aa14.38□□□□□ -0.11
MS4A6A-210ENST00000529054 PTGER2P43116 358 aa14.37□□□□□ -0.11
MS4A6A-210ENST00000529054 KCNH8Q96L42 1107 aa14.34□□□□□ -0.11
MS4A6A-210ENST00000529054 TK2O00142 265 aa14.33□□□□□ -0.12
MS4A6A-210ENST00000529054 PTPREP23469 700 aa14.33□□□□□ -0.12
MS4A6A-210ENST00000529054 HRO43593 1189 aa14.31□□□□□ -0.12
MS4A6A-210ENST00000529054 PHF14O94880 888 aa14.31□□□□□ -0.12
MS4A6A-210ENST00000529054 PDIA6Q15084 440 aa14.3□□□□□ -0.12
MS4A6A-210ENST00000529054 TYW1BQ6NUM6 668 aa14.3□□□□□ -0.12
MS4A6A-210ENST00000529054 DDX12PQ92771 950 aa14.3□□□□□ -0.12
MS4A6A-210ENST00000529054 VPS9D1Q9Y2B5 631 aa14.29□□□□□ -0.12
MS4A6A-210ENST00000529054 FBXW7Q969H0 707 aa14.26□□□□□ -0.13
MS4A6A-210ENST00000529054 ZBED2Q9BTP6 218 aa14.26□□□□□ -0.13
MS4A6A-210ENST00000529054 ARIH1Q9Y4X5 557 aaPredicted RBP14.26□□□□□ -0.13
MS4A6A-210ENST00000529054 SPDYE16A6NNV3 312 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms