RNA–Protein interactions for RNA: ENST00000528556.5

RDX-205, Transcript of radixin, humanhuman

TSL 3

Gene RDX, Length 803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-205ENST00000528556 ADCY10Q96PN6 1610 aa12.95□□□□□ -0.34
RDX-205ENST00000528556 LRRC9Q6ZRR7 1453 aa12.93□□□□□ -0.34
RDX-205ENST00000528556 SAMD1Q6SPF0 538 aaPredicted RBP12.93□□□□□ -0.34
RDX-205ENST00000528556 KCNH8Q96L42 1107 aa12.93□□□□□ -0.34
RDX-205ENST00000528556 LRRIQ1Q96JM4 1722 aa12.93□□□□□ -0.34
RDX-205ENST00000528556 ZCCHC11Q5TAX3 1644 aaKnown RBP12.92□□□□□ -0.34
RDX-205ENST00000528556 EHBP1L1Q8N3D4 1523 aa12.92□□□□□ -0.34
RDX-205ENST00000528556 KDM5BQ9UGL1 1544 aa12.91□□□□□ -0.34
RDX-205ENST00000528556 TROQ12816 1431 aaPredicted RBP12.89□□□□□ -0.35
RDX-205ENST00000528556 SUPT6HQ7KZ85 1726 aaKnown RBP12.88□□□□□ -0.35
RDX-205ENST00000528556 KIF14Q15058 1648 aa12.86□□□□□ -0.35
RDX-205ENST00000528556 ASXL2Q76L83 1435 aa12.86□□□□□ -0.35
RDX-205ENST00000528556 CCNB3Q8WWL7 1395 aa12.85□□□□□ -0.35
RDX-205ENST00000528556 WDR7Q9Y4E6 1490 aa12.85□□□□□ -0.35
RDX-205ENST00000528556 MAGI3Q5TCQ9 1506 aa12.84□□□□□ -0.35
RDX-205ENST00000528556 NCOA2Q15596 1464 aa12.84□□□□□ -0.35
RDX-205ENST00000528556 ATXN8OSP0DMR3 200 aa12.82□□□□□ -0.36
RDX-205ENST00000528556 POLA2Q14181 598 aa12.82□□□□□ -0.36
RDX-205ENST00000528556 TRIM26Q12899 539 aaPredicted RBP12.81□□□□□ -0.36
RDX-205ENST00000528556 FAM50AQ14320 339 aaKnown RBP12.81□□□□□ -0.36
RDX-205ENST00000528556 ZNF777Q9ULD5 760 aaPredicted RBP12.81□□□□□ -0.36
RDX-205ENST00000528556 CFDP1Q9UEE9 299 aaPredicted RBP12.8□□□□□ -0.36
RDX-205ENST00000528556 ATF5Q9Y2D1 282 aaPredicted RBP12.8□□□□□ -0.36
RDX-205ENST00000528556 MAPKBP1O60336 1514 aa12.79□□□□□ -0.36
RDX-205ENST00000528556 PHLDB1Q86UU1 1377 aa12.79□□□□□ -0.36
RDX-205ENST00000528556 FAM69CQ0P6D2 419 aa12.78□□□□□ -0.36
RDX-205ENST00000528556 MYOM3Q5VTT5 1437 aa12.78□□□□□ -0.36
RDX-205ENST00000528556 ITGAEP38570 1179 aa12.77□□□□□ -0.37
RDX-205ENST00000528556 ITSN2Q9NZM3 1697 aa12.77□□□□□ -0.37
RDX-205ENST00000528556 ARHGAP5Q13017 1502 aa12.75□□□□□ -0.37
RDX-205ENST00000528556 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.75□□□□□ -0.37
RDX-205ENST00000528556 EFCAB2Q5VUJ9 269 aa12.74□□□□□ -0.37
RDX-205ENST00000528556 PCGF6Q9BYE7 350 aa12.74□□□□□ -0.37
RDX-205ENST00000528556 MYO5CQ9NQX4 1742 aa12.74□□□□□ -0.37
RDX-205ENST00000528556 TTC37Q6PGP7 1564 aa12.73□□□□□ -0.37
RDX-205ENST00000528556 FGD6Q6ZV73 1430 aa12.73□□□□□ -0.37
RDX-205ENST00000528556 GPATCH8Q9UKJ3 1502 aaKnown RBP12.72□□□□□ -0.37
RDX-205ENST00000528556 ABCC10Q5T3U5 1492 aa12.72□□□□□ -0.37
RDX-205ENST00000528556 CD109Q6YHK3 1445 aa12.72□□□□□ -0.37
RDX-205ENST00000528556 MIA2Q96PC5 1412 aa12.72□□□□□ -0.37
RDX-205ENST00000528556 RBM42Q9BTD8 480 aaKnown RBP12.72□□□□□ -0.37
RDX-205ENST00000528556 ABCA9Q8IUA7 1624 aa12.71□□□□□ -0.37
RDX-205ENST00000528556 CDC42BPAQ5VT25 1732 aa12.7□□□□□ -0.38
RDX-205ENST00000528556 PLCH2O75038 1416 aa12.7□□□□□ -0.38
RDX-205ENST00000528556 RRBP1Q9P2E9 1410 aaKnown RBP12.7□□□□□ -0.38
RDX-205ENST00000528556 PREX2Q70Z35 1606 aa12.7□□□□□ -0.38
RDX-205ENST00000528556 PTPN23Q9H3S7 1636 aa12.7□□□□□ -0.38
RDX-205ENST00000528556 CHRDL2Q6WN34 429 aa12.69□□□□□ -0.38
RDX-205ENST00000528556 MYT1LQ9UL68 1186 aa12.69□□□□□ -0.38
RDX-205ENST00000528556 DIP2BQ9P265 1576 aa12.69□□□□□ -0.38
RDX-205ENST00000528556 GLI2P10070 1586 aa12.68□□□□□ -0.38
RDX-205ENST00000528556 ZNF644Q9H582 1327 aaPredicted RBP12.67□□□□□ -0.38
RDX-205ENST00000528556 CAMSAP2Q08AD1 1489 aa12.67□□□□□ -0.38
RDX-205ENST00000528556 FANCAO15360 1455 aa12.66□□□□□ -0.38
RDX-205ENST00000528556 PLEKHH2Q8IVE3 1493 aa12.65□□□□□ -0.38
RDX-205ENST00000528556 CDC42BPBQ9Y5S2 1711 aa12.65□□□□□ -0.38
RDX-205ENST00000528556 CFAP74Q9C0B2 1584 aa12.65□□□□□ -0.38
RDX-205ENST00000528556 TSPY4P0CV99 314 aa12.65□□□□□ -0.38
RDX-205ENST00000528556 TSPY10P0CW01 314 aa12.65□□□□□ -0.38
RDX-205ENST00000528556 HNRNPMP52272 730 aaKnown RBP eCLIP12.65□□□□□ -0.38
RDX-205ENST00000528556 TSPOAP1O95153 1857 aa12.64□□□□□ -0.39
RDX-205ENST00000528556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.64□□□□□ -0.39
RDX-205ENST00000528556 TCOF1Q13428 1488 aaKnown RBP12.64□□□□□ -0.39
RDX-205ENST00000528556 TEX14Q8IWB6 1497 aa12.64□□□□□ -0.39
RDX-205ENST00000528556 ARAP3Q8WWN8 1544 aa12.63□□□□□ -0.39
RDX-205ENST00000528556 MAP3K4Q9Y6R4 1608 aa12.63□□□□□ -0.39
RDX-205ENST00000528556 RSPH4AQ5TD94 716 aa12.63□□□□□ -0.39
RDX-205ENST00000528556 AKNAQ7Z591 1439 aa12.62□□□□□ -0.39
RDX-205ENST00000528556 ADGRL1O94910 1474 aa12.62□□□□□ -0.39
RDX-205ENST00000528556 CHIC2Q9UKJ5 165 aa12.62□□□□□ -0.39
RDX-205ENST00000528556 SAMD9LQ8IVG5 1584 aa12.61□□□□□ -0.39
RDX-205ENST00000528556 SCAPERQ9BY12 1400 aa12.61□□□□□ -0.39
RDX-205ENST00000528556 KIF13AQ9H1H9 1805 aa12.6□□□□□ -0.39
RDX-205ENST00000528556 SYCP2Q9BX26 1530 aa12.6□□□□□ -0.39
RDX-205ENST00000528556 NEO1Q92859 1461 aa12.59□□□□□ -0.39
RDX-205ENST00000528556 DAPK1P53355 1430 aa12.59□□□□□ -0.39
RDX-205ENST00000528556 CCDC141Q6ZP82 1450 aa12.59□□□□□ -0.39
RDX-205ENST00000528556 KIAA1107Q9UPP5 1409 aa12.58□□□□□ -0.4
RDX-205ENST00000528556 ABCC1P33527 1531 aa12.57□□□□□ -0.4
RDX-205ENST00000528556 DNMT1P26358 1616 aaKnown RBP12.57□□□□□ -0.4
RDX-205ENST00000528556 SPAG9O60271 1321 aaKnown RBP12.57□□□□□ -0.4
RDX-205ENST00000528556 ABCC5O15440 1437 aa12.56□□□□□ -0.4
RDX-205ENST00000528556 AFAP1Q8N556 730 aa12.56□□□□□ -0.4
RDX-205ENST00000528556 RRP7BPQ9NSQ0 103 aa12.56□□□□□ -0.4
RDX-205ENST00000528556 DENND4BO75064 1496 aaPredicted RBP12.56□□□□□ -0.4
RDX-205ENST00000528556 ARHGEF5Q12774 1597 aa12.56□□□□□ -0.4
RDX-205ENST00000528556 ANKRD30AQ9BXX3 1397 aa12.55□□□□□ -0.4
RDX-205ENST00000528556 C9orf84Q5VXU9 1444 aa12.54□□□□□ -0.4
RDX-205ENST00000528556 TRAPPC8Q9Y2L5 1435 aa12.54□□□□□ -0.4
RDX-205ENST00000528556 ZNF518AQ6AHZ1 1483 aa12.53□□□□□ -0.4
RDX-205ENST00000528556 MBD5Q9P267 1494 aa12.53□□□□□ -0.4
RDX-205ENST00000528556 RAPGEF3O95398 923 aa12.53□□□□□ -0.4
RDX-205ENST00000528556 ARHGEF12Q9NZN5 1544 aa12.52□□□□□ -0.4
RDX-205ENST00000528556 SHANK2Q9UPX8 1470 aa12.52□□□□□ -0.41
RDX-205ENST00000528556 CROCC2H7BZ55 1655 aa12.51□□□□□ -0.41
RDX-205ENST00000528556 POGZQ7Z3K3 1410 aa12.51□□□□□ -0.41
RDX-205ENST00000528556 PPRC1Q5VV67 1664 aaKnown RBP12.51□□□□□ -0.41
RDX-205ENST00000528556 ADGBQ8N7X0 1667 aa12.51□□□□□ -0.41
RDX-205ENST00000528556 PTPRKQ15262 1439 aa12.5□□□□□ -0.41
RDX-205ENST00000528556 SETD5Q9C0A6 1442 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms