RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 CDC42BPBQ9Y5S2 1711 aa33.82■■■■□ 3
PACSIN3-205ENST00000528462 EFCAB2Q5VUJ9 269 aa33.79■■■■□ 3
PACSIN3-205ENST00000528462 ARHGAP5Q13017 1502 aa33.79■■■■□ 3
PACSIN3-205ENST00000528462 RRBP1Q9P2E9 1410 aaKnown RBP33.78■■■■□ 3
PACSIN3-205ENST00000528462 TRHP20396 242 aaPredicted RBP33.78■■■■□ 3
PACSIN3-205ENST00000528462 FANCAO15360 1455 aa33.76■■■■□ 3
PACSIN3-205ENST00000528462 TEX14Q8IWB6 1497 aa33.73■■■□□ 2.99
PACSIN3-205ENST00000528462 NEO1Q92859 1461 aa33.73■■■□□ 2.99
PACSIN3-205ENST00000528462 TCOF1Q13428 1488 aaKnown RBP33.72■■■□□ 2.99
PACSIN3-205ENST00000528462 PPRC1Q5VV67 1664 aaKnown RBP33.71■■■□□ 2.99
PACSIN3-205ENST00000528462 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.71■■■□□ 2.99
PACSIN3-205ENST00000528462 CFAP74Q9C0B2 1584 aa33.7■■■□□ 2.99
PACSIN3-205ENST00000528462 PTPN23Q9H3S7 1636 aa33.7■■■□□ 2.98
PACSIN3-205ENST00000528462 PLEKHH2Q8IVE3 1493 aa33.67■■■□□ 2.98
PACSIN3-205ENST00000528462 KIAA1107Q9UPP5 1409 aa33.67■■■□□ 2.98
PACSIN3-205ENST00000528462 CAMSAP2Q08AD1 1489 aa33.67■■■□□ 2.98
PACSIN3-205ENST00000528462 SAMD9LQ8IVG5 1584 aa33.66■■■□□ 2.98
PACSIN3-205ENST00000528462 ZNF644Q9H582 1327 aaPredicted RBP33.66■■■□□ 2.98
PACSIN3-205ENST00000528462 ZNF777Q9ULD5 760 aaPredicted RBP33.65■■■□□ 2.98
PACSIN3-205ENST00000528462 TSPOAP1O95153 1857 aa33.65■■■□□ 2.98
PACSIN3-205ENST00000528462 AKNAQ7Z591 1439 aa33.64■■■□□ 2.98
PACSIN3-205ENST00000528462 ABCC1P33527 1531 aa33.6■■■□□ 2.97
PACSIN3-205ENST00000528462 ADGRL1O94910 1474 aa33.59■■■□□ 2.97
PACSIN3-205ENST00000528462 FAM50AQ14320 339 aaKnown RBP33.57■■■□□ 2.96
PACSIN3-205ENST00000528462 MBD5Q9P267 1494 aa33.57■■■□□ 2.96
PACSIN3-205ENST00000528462 RSPH4AQ5TD94 716 aa33.55■■■□□ 2.96
PACSIN3-205ENST00000528462 ARHGEF12Q9NZN5 1544 aa33.54■■■□□ 2.96
PACSIN3-205ENST00000528462 SYCP2Q9BX26 1530 aa33.54■■■□□ 2.96
PACSIN3-205ENST00000528462 SCAPERQ9BY12 1400 aa33.54■■■□□ 2.96
PACSIN3-205ENST00000528462 ARHGEF5Q12774 1597 aa33.53■■■□□ 2.96
PACSIN3-205ENST00000528462 TRIM26Q12899 539 aaPredicted RBP33.51■■■□□ 2.95
PACSIN3-205ENST00000528462 HNRNPMP52272 730 aaKnown RBP eCLIP33.5■■■□□ 2.95
PACSIN3-205ENST00000528462 DNMT1P26358 1616 aaKnown RBP33.47■■■□□ 2.95
PACSIN3-205ENST00000528462 DENND4BO75064 1496 aaPredicted RBP33.46■■■□□ 2.95
PACSIN3-205ENST00000528462 CCDC141Q6ZP82 1450 aa33.46■■■□□ 2.95
PACSIN3-205ENST00000528462 ABCC5O15440 1437 aa33.45■■■□□ 2.95
PACSIN3-205ENST00000528462 POGZQ7Z3K3 1410 aa33.45■■■□□ 2.95
PACSIN3-205ENST00000528462 TRAPPC8Q9Y2L5 1435 aa33.45■■■□□ 2.95
PACSIN3-205ENST00000528462 DAPK1P53355 1430 aa33.44■■■□□ 2.94
PACSIN3-205ENST00000528462 ZNF518AQ6AHZ1 1483 aa33.43■■■□□ 2.94
PACSIN3-205ENST00000528462 COL17A1Q9UMD9 1497 aaPredicted RBP33.39■■■□□ 2.94
PACSIN3-205ENST00000528462 SHANK2Q9UPX8 1470 aa33.39■■■□□ 2.94
PACSIN3-205ENST00000528462 AFAP1Q8N556 730 aa33.38■■■□□ 2.93
PACSIN3-205ENST00000528462 KDM5CP41229 1560 aa33.37■■■□□ 2.93
PACSIN3-205ENST00000528462 RICTORQ6R327 1708 aa33.36■■■□□ 2.93
PACSIN3-205ENST00000528462 TSPY4P0CV99 314 aa33.36■■■□□ 2.93
PACSIN3-205ENST00000528462 TSPY10P0CW01 314 aa33.36■■■□□ 2.93
PACSIN3-205ENST00000528462 PTPRKQ15262 1439 aa33.35■■■□□ 2.93
PACSIN3-205ENST00000528462 RAPGEF3O95398 923 aa33.35■■■□□ 2.93
PACSIN3-205ENST00000528462 CROCC2H7BZ55 1655 aa33.34■■■□□ 2.93
PACSIN3-205ENST00000528462 FRMPD1Q5SYB0 1578 aa33.33■■■□□ 2.93
PACSIN3-205ENST00000528462 MAST1Q9Y2H9 1570 aa33.32■■■□□ 2.93
PACSIN3-205ENST00000528462 RTEL1-TNFRSF6BF6WH68 1400 aa33.32■■■□□ 2.92
PACSIN3-205ENST00000528462 C9orf84Q5VXU9 1444 aa33.32■■■□□ 2.92
PACSIN3-205ENST00000528462 MLH3Q9UHC1 1453 aa33.3■■■□□ 2.92
PACSIN3-205ENST00000528462 ZMYM4Q5VZL5 1548 aa33.3■■■□□ 2.92
PACSIN3-205ENST00000528462 ITGAEP38570 1179 aa33.3■■■□□ 2.92
PACSIN3-205ENST00000528462 SPAG9O60271 1321 aaKnown RBP33.29■■■□□ 2.92
PACSIN3-205ENST00000528462 ROCK1Q13464 1354 aa33.28■■■□□ 2.92
PACSIN3-205ENST00000528462 ADGRL2O95490 1459 aa33.27■■■□□ 2.92
PACSIN3-205ENST00000528462 KDM6BO15054 1643 aa33.27■■■□□ 2.92
PACSIN3-205ENST00000528462 MAGI2Q86UL8 1455 aa33.25■■■□□ 2.91
PACSIN3-205ENST00000528462 ZFYVE16Q7Z3T8 1539 aa33.25■■■□□ 2.91
PACSIN3-205ENST00000528462 INO80Q9ULG1 1556 aaPredicted RBP33.24■■■□□ 2.91
PACSIN3-205ENST00000528462 HECW2Q9P2P5 1572 aa33.23■■■□□ 2.91
PACSIN3-205ENST00000528462 ATP7AQ04656 1500 aa33.22■■■□□ 2.91
PACSIN3-205ENST00000528462 NCOA1Q15788 1441 aa33.22■■■□□ 2.91
PACSIN3-205ENST00000528462 ANKRD30AQ9BXX3 1397 aa33.21■■■□□ 2.91
PACSIN3-205ENST00000528462 CHIC2Q9UKJ5 165 aa33.21■■■□□ 2.91
PACSIN3-205ENST00000528462 KIDINS220Q9ULH0 1771 aa33.19■■■□□ 2.9
PACSIN3-205ENST00000528462 PLXNC1O60486 1568 aa33.18■■■□□ 2.9
PACSIN3-205ENST00000528462 ADGBQ8N7X0 1667 aa33.18■■■□□ 2.9
PACSIN3-205ENST00000528462 HFM1A2PYH4 1435 aa33.14■■■□□ 2.9
PACSIN3-205ENST00000528462 PCGF6Q9BYE7 350 aa33.13■■■□□ 2.89
PACSIN3-205ENST00000528462 KIF15Q9NS87 1388 aa33.11■■■□□ 2.89
PACSIN3-205ENST00000528462 YEATS2Q9ULM3 1422 aa33.09■■■□□ 2.89
PACSIN3-205ENST00000528462 MYT1LQ9UL68 1186 aa33.09■■■□□ 2.89
PACSIN3-205ENST00000528462 NAIPQ13075 1403 aa33.09■■■□□ 2.89
PACSIN3-205ENST00000528462 RRP7BPQ9NSQ0 103 aa33.09■■■□□ 2.89
PACSIN3-205ENST00000528462 DIP2CQ9Y2E4 1556 aa33.06■■■□□ 2.88
PACSIN3-205ENST00000528462 ABCA6Q8N139 1617 aa33.06■■■□□ 2.88
PACSIN3-205ENST00000528462 ARHGEF40Q8TER5 1519 aa33.06■■■□□ 2.88
PACSIN3-205ENST00000528462 DUOX2Q9NRD8 1548 aa33.05■■■□□ 2.88
PACSIN3-205ENST00000528462 ATP10AO60312 1499 aa33.02■■■□□ 2.88
PACSIN3-205ENST00000528462 DHX29Q7Z478 1369 aaKnown RBP33.02■■■□□ 2.88
PACSIN3-205ENST00000528462 GCC2Q8IWJ2 1684 aa33.02■■■□□ 2.88
PACSIN3-205ENST00000528462 REREQ9P2R6 1566 aa33■■■□□ 2.87
PACSIN3-205ENST00000528462 A2MP01023 1474 aa33■■■□□ 2.87
PACSIN3-205ENST00000528462 ANKRD50Q9ULJ7 1429 aa33■■■□□ 2.87
PACSIN3-205ENST00000528462 ERBINQ96RT1 1412 aa32.99■■■□□ 2.87
PACSIN3-205ENST00000528462 SETD5Q9C0A6 1442 aa32.99■■■□□ 2.87
PACSIN3-205ENST00000528462 HRCP23327 699 aa32.93■■■□□ 2.86
PACSIN3-205ENST00000528462 EIF2AK4Q9P2K8 1649 aaKnown RBP32.9■■■□□ 2.86
PACSIN3-205ENST00000528462 ACIN1Q9UKV3 1341 aaKnown RBP32.89■■■□□ 2.86
PACSIN3-205ENST00000528462 AGLP35573 1532 aa32.89■■■□□ 2.86
PACSIN3-205ENST00000528462 RAB3GAP2Q9H2M9 1393 aa32.89■■■□□ 2.86
PACSIN3-205ENST00000528462 BCORL1Q5H9F3 1711 aa32.87■■■□□ 2.85
PACSIN3-205ENST00000528462 KIF3BO15066 747 aa32.8■■■□□ 2.84
PACSIN3-205ENST00000528462 SIGLEC1Q9BZZ2 1709 aa32.77■■■□□ 2.84
PACSIN3-205ENST00000528462 RNF17Q9BXT8 1623 aaKnown RBP32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms